Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:03 (2363701): wrapper (7.7.26015): starting
08:31:03 (2363701): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:31:03] Arguments: --nthreads 10
[2026-01-10 08:31:03] Threads: 10
[2026-01-10 08:31:03] Checking for CVMFS
[2026-01-10 08:31:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:31:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:31:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:31:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:31:04] 2.13.3.0 16090 94864 403332 154981 0 454 30360200 32935936 20015 16776704 0 1018302205 99.549 1178483924 52169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:31:04] CVMFS is ok
[2026-01-10 08:31:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:31:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:31:04] Further information can be found at the LHC@home message board.
[2026-01-10 08:31:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:31:04] Checking for apptainer binary...
[2026-01-10 08:31:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:31:04] Running /usr/bin/apptainer --version
[2026-01-10 08:31:04] apptainer version 1.4.5-2.el9
[2026-01-10 08:31:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:31:04] c7-9-15.aglt2.org
[2026-01-10 08:31:04] apptainer works
[2026-01-10 08:31:04] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:31:04] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:31:04] Starting ATLAS job with PandaID=6965384145
[2026-01-10 08:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:17:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:17:38] 2026-01-10 14:16:37,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:39,265 | INFO     | time since job start (2722s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:39,944 | INFO     | monitor loop #180: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:39,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:41,143 | INFO     | PID=2373953 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:17:38] 2026-01-10 14:16:41,143 | INFO     | .. there are 32 such processes running
[2026-01-10 09:17:38] 2026-01-10 14:16:42,144 | INFO     | time since job start (2725s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:42,463 | INFO     | monitor loop #181: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:42,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:44,151 | INFO     | time since job start (2727s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:44,970 | INFO     | monitor loop #182: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:44,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:46,158 | INFO     | time since job start (2729s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:47,479 | INFO     | monitor loop #183: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:47,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:48,165 | INFO     | time since job start (2731s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:49,984 | INFO     | monitor loop #184: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:49,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:50,172 | INFO     | time since job start (2733s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:52,179 | INFO     | time since job start (2735s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:52,489 | INFO     | monitor loop #185: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:52,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:54,186 | INFO     | time since job start (2737s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:54,187 | INFO     | 2739s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 09:17:38] 2026-01-10 14:16:54,999 | INFO     | monitor loop #186: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:55,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:56,193 | INFO     | time since job start (2739s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:16:57,508 | INFO     | monitor loop #187: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:16:57,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:16:58,200 | INFO     | time since job start (2741s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:17:00,012 | INFO     | monitor loop #188: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:17:00,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:17:00,207 | INFO     | time since job start (2743s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:17:02,214 | INFO     | time since job start (2745s) is within the limit (349056.0s)
[2026-01-10 09:17:38] 2026-01-10 14:17:02,521 | INFO     | monitor loop #189: job 0:6965384145 is in state 'finished'
[2026-01-10 09:17:38] 2026-01-10 14:17:02,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,530 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:17:38] 2026-01-10 14:17:03,562 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2397812499985
[2026-01-10 09:17:38] 2026-01-10 14:17:03,632 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384145/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,632 | INFO     | extracted standard info from prmon json
[2026-01-10 09:17:38] 2026-01-10 14:17:03,633 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:17:38] 2026-01-10 14:17:03,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:17:38] 2026-01-10 14:17:03,633 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | sum of square deviations: 15657684.702702707
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | sum of deviations: -15161226510.64865
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | mean x: 1768053309.3783784
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | mean y: 2361529.189189189
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | intersect: 1711996006525.7915
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | chi2: 6.110820738399702
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | current memory leak: -968.29 B/s (using 37 data points, chi2=6.11)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | ..............................
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . Timing measurements:
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . get job = 0 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . initial setup = 2 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . payload setup = 6 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . stage-in = 0 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . payload execution = 2686 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . stage-out = 1 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,634 | INFO     | . log creation = 0 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,635 | INFO     | ..............................
[2026-01-10 09:17:38] 2026-01-10 14:17:03,813 | INFO     | 
[2026-01-10 09:17:38] 2026-01-10 14:17:03,813 | INFO     | job summary report
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | --------------------------------------------------
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | PanDA job id: 6965384145
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | task id: 47962010
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | errors: (none)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | pilot state: finished 
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | transexitcode: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | exeerrorcode: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | exeerrordiag: 
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | exitcode: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | exitmsg: OK
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | cpuconsumptiontime: 8785 s
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | nevents: 50
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | neventsw: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | pid: 2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | pgrp: 2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | corecount: 10
[2026-01-10 09:17:38] 2026-01-10 14:17:03,814 | INFO     | event service: False
[2026-01-10 09:17:38] 2026-01-10 14:17:03,819 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2697: 2310909, 2699: 2319903, 2701: 2319959, 2731: 2320365}
[2026-01-10 09:17:38] 2026-01-10 14:17:03,819 | INFO     | --------------------------------------------------
[2026-01-10 09:17:38] 2026-01-10 14:17:03,819 | INFO     | 
[2026-01-10 09:17:38] 2026-01-10 14:17:03,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | job 6965384145 has completed (purged errors)
[2026-01-10 09:17:38] 2026-01-10 14:17:03,926 | INFO     | overall cleanup function is called
[2026-01-10 09:17:38] 2026-01-10 14:17:04,516 | INFO     | PID=2373953 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:17:38] 2026-01-10 14:17:04,516 | INFO     | .. there are 32 such processes running
[2026-01-10 09:17:38] 2026-01-10 14:17:04,960 | INFO     | --- collectZombieJob: --- 10, [2387377]
[2026-01-10 09:17:38] 2026-01-10 14:17:04,960 | INFO     | zombie collector waiting for pid 2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:04,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:17:38] 2026-01-10 14:17:04,961 | INFO     | collected zombie processes
[2026-01-10 09:17:38] 2026-01-10 14:17:04,961 | INFO     | will attempt to kill all subprocesses of pid=2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:05,806 | INFO     | process IDs to be killed: [2387377] (in reverse order)
[2026-01-10 09:17:38] 2026-01-10 14:17:05,976 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:17:38] 2026-01-10 14:17:05,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:17:38] 2026-01-10 14:17:06,026 | INFO     | did not find any defunct processes belonging to 2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:06,059 | INFO     | did not find any defunct processes belonging to 2387377
[2026-01-10 09:17:38] 2026-01-10 14:17:06,060 | INFO     | ready for new job
[2026-01-10 09:17:38] 2026-01-10 14:17:06,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:17:38] 2026-01-10 14:17:06,061 | INFO     | ***************************************
[2026-01-10 09:17:38] 2026-01-10 14:17:06,061 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:17:38] 2026-01-10 14:17:06,061 | INFO     | ***************************************
[2026-01-10 09:17:38] 2026-01-10 14:17:06,061 | INFO     | 
[2026-01-10 09:17:38] 2026-01-10 14:17:06,066 | INFO     | architecture information:
[2026-01-10 09:17:38] 2026-01-10 14:17:06,066 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:17:38] 2026-01-10 14:17:06,132 | INFO     | cat /etc/os-release:
[2026-01-10 09:17:38] NAME="CentOS Linux"
[2026-01-10 09:17:38] VERSION="7 (Core)"
[2026-01-10 09:17:38] ID="centos"
[2026-01-10 09:17:38] ID_LIKE="rhel fedora"
[2026-01-10 09:17:38] VERSION_ID="7"
[2026-01-10 09:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:17:38] ANSI_COLOR="0;31"
[2026-01-10 09:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:17:38] HOME_URL="https://www.centos.org/"
[2026-01-10 09:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:17:38] 
[2026-01-10 09:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:17:38] 
[2026-01-10 09:17:38] 2026-01-10 14:17:06,132 | INFO     | ***************************************
[2026-01-10 09:17:38] 2026-01-10 14:17:06,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | INFO     | sufficient remaining disk space (70036488192 B)
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | INFO     | update_server=False
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | INFO     | aborting loop
[2026-01-10 09:17:38] 2026-01-10 14:17:06,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:17:38] 2026-01-10 14:17:06,746 | INFO     | all data control threads have been joined
[2026-01-10 09:17:38] 2026-01-10 14:17:07,092 | INFO     | all payload control threads have been joined
[2026-01-10 09:17:38] 2026-01-10 14:17:07,112 | INFO     | all job control threads have been joined
[2026-01-10 09:17:38] 2026-01-10 14:17:07,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:17:38] 2026-01-10 14:17:07,693 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:07,694 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:07,738 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:07,752 | INFO     | [data] control thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:07,863 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,107 | INFO     | [payload] control thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,130 | INFO     | [job] control thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,170 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,395 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:17:38] 2026-01-10 14:17:08,848 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:08,871 | INFO     | [job] validate thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:09,035 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:09,497 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:09,837 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:10,696 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:17,725 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:17:38] 2026-01-10 14:17:18,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:17:38] 2026-01-10 14:17:21,866 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:17:38] 2026-01-10 14:17:23,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770807375680)>', '<ExcThread(monitor, started 139770038576896)>']
[2026-01-10 09:17:38] 2026-01-10 14:17:28,500 | INFO     | all workflow threads have been joined
[2026-01-10 09:17:38] 2026-01-10 14:17:28,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:17:38] 2026-01-10 14:17:28,501 | INFO     | traces error code: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:28,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:17:38] 2026-01-10 14:17:37,849 | INFO     | PID=2373953 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:17:38] 2026-01-10 14:17:37,849 | INFO     | .. there are 32 such processes running
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 09:17:38] 2026-01-10 14:17:37,850 | INFO     | [monitor] control thread has ended
[2026-01-10 09:17:38] 2026-01-10 14:17:38,030 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:17:38] 2026-01-10 14:17:38,037 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:17:38] 2026-01-10 14:17:38,047 [wrapper] pilotpid: 2373953
[2026-01-10 09:17:38] 2026-01-10 14:17:38,062 [wrapper] Pilot exit status: 0
[2026-01-10 09:17:38] 2026-01-10 14:17:38,160 [wrapper] pandaids: 6965384145
[2026-01-10 09:17:38] 2026-01-10 14:17:38,335 [wrapper] cleanup supervisor_pilot 2893949 2373954
[2026-01-10 09:17:38] 2026-01-10 14:17:38,338 [wrapper] Test setup, not cleaning
[2026-01-10 09:17:38] 2026-01-10 14:17:38,342 [wrapper] apfmon messages muted
[2026-01-10 09:17:38] 2026-01-10 14:17:38,344 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:17:38] 2026-01-10 14:17:38,347 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:17:38]  *** Error codes and diagnostics ***
[2026-01-10 09:17:38]     "exeErrorCode": 0,
[2026-01-10 09:17:38]     "exeErrorDiag": "",
[2026-01-10 09:17:38]     "pilotErrorCode": 0,
[2026-01-10 09:17:38]     "pilotErrorDiag": "",
[2026-01-10 09:17:38]  *** Listing of results directory ***
[2026-01-10 09:17:38] total 437268
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:17:38] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:17:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:31 run_atlas
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:31 job.xml
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas 392458857 Jan 10 08:31 EVNT.47962006._000084.pool.root.1
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 09:17:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:31 shared
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas    592609 Jan 10 08:31 input.tar.gz
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:31 boinc_lockfile
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:31 pandaJob.out
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas        57 Jan 10 08:31 setup.sh.local
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas    989556 Jan 10 08:31 agis_schedconf.cvmfs.json
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:17:38] drwx------. 5 boincer umatlas      4096 Jan 10 08:31 pilot3
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas       528 Jan 10 09:03 boinc_task_state.xml
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas      7169 Jan 10 09:09 init_data.xml
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas  47834393 Jan 10 09:15 HITS.47962010._002286.pool.root.1
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas      1037 Jan 10 09:16 memory_monitor_summary.json
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas   1360201 Jan 10 09:16 log.47962010._002286.job.log.tgz.1
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas      8542 Jan 10 09:17 heartbeat.json
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:17 boinc_mmap_file
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas        26 Jan 10 09:17 wrapper_checkpoint.txt
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas       893 Jan 10 09:17 pilotlog.txt
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas        95 Jan 10 09:17 pilot_heartbeat.json
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas    415275 Jan 10 09:17 log.47962010._002286.job.log.1
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas       353 Jan 10 09:17 output.list
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:17 runtime_log
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas   1792000 Jan 10 09:17 result.tar.gz
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 09:17 runtime_log.err
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas       651 Jan 10 09:17 gD0KDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIqmKDmNgonon.diag
[2026-01-10 09:17:38] -rw-r--r--. 1 boincer umatlas     22470 Jan 10 09:17 stderr.txt
[2026-01-10 09:17:38] HITS file was successfully produced:
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas 47834393 Jan 10 09:15 shared/HITS.pool.root.1
[2026-01-10 09:17:38]  *** Contents of shared directory: ***
[2026-01-10 09:17:38] total 432332
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas 392458857 Jan 10 08:31 ATLAS.root_0
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:31 start_atlas.sh
[2026-01-10 09:17:38] -rw-r--r--. 2 boincer umatlas    592609 Jan 10 08:31 input.tar.gz
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas  47834393 Jan 10 09:15 HITS.pool.root.1
[2026-01-10 09:17:38] -rw-------. 1 boincer umatlas   1792000 Jan 10 09:17 result.tar.gz
09:17:40 (2363701): run_atlas exited; CPU time 8783.329101
09:17:40 (2363701): called boinc_finish(0)

</stderr_txt>
]]>

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