Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:57:16 (4523): wrapper (7.7.26015): starting
16:57:16 (4523): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 16:57:16] Arguments: --nthreads 8
[2026-01-10 16:57:16] Threads: 8
[2026-01-10 16:57:16] Checking for CVMFS
[2026-01-10 16:57:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:57:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:57:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:57:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:57:19] 2.11.2.0 21704 37065 132060 154984 0 87 19832419 25165824 899 130560 0 18080693 99.814 11986505 3004 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 16:57:19] CVMFS is ok
[2026-01-10 16:57:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:57:19] Checking for apptainer binary...
[2026-01-10 16:57:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:57:19] Running /usr/bin/apptainer --version
[2026-01-10 16:57:19] apptainer version 1.3.2-1.el7
[2026-01-10 16:57:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:57:36] cg-vwn497.simple-grid.lan
[2026-01-10 16:57:36] apptainer works
[2026-01-10 16:57:36] Set ATHENA_PROC_NUMBER=8
[2026-01-10 16:57:36] Set ATHENA_CORE_NUMBER=8
[2026-01-10 16:57:36] Starting ATLAS job with PandaID=6965384043
[2026-01-10 16:57:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:11:33]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:11:33] 2026-01-10 18:10:42,338 | INFO     | time since job start (7732s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:44,337 | INFO     | monitor loop #645: job 0:6965384043 is in state 'finished'
[2026-01-10 19:11:33] 2026-01-10 18:10:44,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:11:33] 2026-01-10 18:10:44,356 | INFO     | time since job start (7734s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:46,371 | INFO     | time since job start (7736s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:46,842 | INFO     | monitor loop #646: job 0:6965384043 is in state 'finished'
[2026-01-10 19:11:33] 2026-01-10 18:10:46,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:11:33] 2026-01-10 18:10:48,383 | INFO     | time since job start (7738s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:49,351 | INFO     | monitor loop #647: job 0:6965384043 is in state 'finished'
[2026-01-10 19:11:33] 2026-01-10 18:10:49,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:11:33] 2026-01-10 18:10:50,393 | INFO     | time since job start (7740s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:51,856 | INFO     | monitor loop #648: job 0:6965384043 is in state 'finished'
[2026-01-10 19:11:33] 2026-01-10 18:10:51,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:11:33] 2026-01-10 18:10:52,405 | INFO     | time since job start (7742s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,361 | INFO     | monitor loop #649: job 0:6965384043 is in state 'finished'
[2026-01-10 19:11:33] 2026-01-10 18:10:54,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,415 | INFO     | time since job start (7744s) is within the limit (349056.0s)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,486 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 19:11:33] 2026-01-10 18:10:54,487 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-10 19:11:33] 2026-01-10 18:10:54,488 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6965384043/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,489 | INFO     | extracted standard info from prmon json
[2026-01-10 19:11:33] 2026-01-10 18:10:54,489 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 19:11:33] 2026-01-10 18:10:54,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 19:11:33] 2026-01-10 18:10:54,492 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:11:33] 2026-01-10 18:10:54,492 | INFO     | sum of square deviations: 483988308.50862134
[2026-01-10 19:11:33] 2026-01-10 18:10:54,493 | INFO     | sum of deviations: 36009852827.58624
[2026-01-10 19:11:33] 2026-01-10 18:10:54,493 | INFO     | mean x: 1768065000.1465516
[2026-01-10 19:11:33] 2026-01-10 18:10:54,493 | INFO     | mean y: 1898900.9655172413
[2026-01-10 19:11:33] 2026-01-10 18:10:54,493 | INFO     | intersect: -131546238369.27487
[2026-01-10 19:11:33] 2026-01-10 18:10:54,494 | INFO     | chi2: 32.97226517774989
[2026-01-10 19:11:33] 2026-01-10 18:10:54,498 | INFO     | sum of square deviations: 424084476.3243231
[2026-01-10 19:11:33] 2026-01-10 18:10:54,499 | INFO     | sum of deviations: 63447788687.72966
[2026-01-10 19:11:33] 2026-01-10 18:10:54,499 | INFO     | mean x: 1768064847.6756756
[2026-01-10 19:11:33] 2026-01-10 18:10:54,499 | INFO     | mean y: 1968746.6036036036
[2026-01-10 19:11:33] 2026-01-10 18:10:54,499 | INFO     | intersect: -264520340142.95477
[2026-01-10 19:11:33] 2026-01-10 18:10:54,500 | INFO     | chi2: 27.214215439578307
[2026-01-10 19:11:33] 2026-01-10 18:10:54,500 | INFO     | current chi2=27.214215439578307 (change=17.463312596603732 %)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,500 | INFO     | right removable region: 110
[2026-01-10 19:11:33] 2026-01-10 18:10:54,500 | INFO     | sum of square deviations: 424038726.3243231
[2026-01-10 19:11:33] 2026-01-10 18:10:54,501 | INFO     | sum of deviations: 2670352820.9189653
[2026-01-10 19:11:33] 2026-01-10 18:10:54,501 | INFO     | mean x: 1768065152.6756756
[2026-01-10 19:11:33] 2026-01-10 18:10:54,501 | INFO     | mean y: 1983762.0810810812
[2026-01-10 19:11:33] 2026-01-10 18:10:54,501 | INFO     | intersect: -11132277037.497194
[2026-01-10 19:11:33] 2026-01-10 18:10:54,501 | INFO     | chi2: 25.52793951565783
[2026-01-10 19:11:33] 2026-01-10 18:10:54,502 | INFO     | current chi2=25.52793951565783 (change=22.577537885130152 %)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,502 | INFO     | left removable region: 10
[2026-01-10 19:11:33] 2026-01-10 18:10:54,502 | INFO     | sum of square deviations: 310050460.75
[2026-01-10 19:11:33] 2026-01-10 18:10:54,502 | INFO     | sum of deviations: 7106042890.249999
[2026-01-10 19:11:33] 2026-01-10 18:10:54,503 | INFO     | mean x: 1768065122.25
[2026-01-10 19:11:33] 2026-01-10 18:10:54,503 | INFO     | mean y: 2167888.43
[2026-01-10 19:11:33] 2026-01-10 18:10:54,503 | INFO     | intersect: -40520096007.16915
[2026-01-10 19:11:33] 2026-01-10 18:10:54,503 | INFO     | chi2: 14.038153484469877
[2026-01-10 19:11:33] 2026-01-10 18:10:54,503 | INFO     | current memory leak: 22.92 B/s (using 100 data points, chi2=14.04)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | could have reported an average CPU frequency of 2249 MHz (7 samples)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | ..............................
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . Timing measurements:
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . get job = 0 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . initial setup = 9 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . payload setup = 196 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . stage-in = 0 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . payload execution = 7216 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,504 | INFO     | . stage-out = 3 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,505 | INFO     | . log creation = 1 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,505 | INFO     | ..............................
[2026-01-10 19:11:33] 2026-01-10 18:10:54,664 | INFO     | 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | job summary report
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | --------------------------------------------------
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | PanDA job id: 6965384043
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | task id: 47962010
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | errors: (none)
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | pilot state: finished 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,665 | INFO     | transexitcode: 0
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | exeerrorcode: 0
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | exeerrordiag: 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | exitcode: 0
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | exitmsg: OK
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | cpuconsumptiontime: 17897 s
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | nevents: 50
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | neventsw: 0
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | pid: 14769
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | pgrp: 14769
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | corecount: 8
[2026-01-10 19:11:33] 2026-01-10 18:10:54,666 | INFO     | event service: False
[2026-01-10 19:11:33] 2026-01-10 18:10:54,667 | INFO     | sizes: {0: 2284343, 1: 2284598, 12: 2284598, 23: 2284626, 33: 2284654, 44: 2284710, 55: 2284866, 66: 2284894, 76: 2284922, 87: 2284978, 98: 2285006, 107: 2285576, 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,667 | INFO     | --------------------------------------------------
[2026-01-10 19:11:33] 2026-01-10 18:10:54,667 | INFO     | 
[2026-01-10 19:11:33] 2026-01-10 18:10:54,667 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-10 19:11:33] 2026-01-10 18:10:55,187 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,189 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:11:33] 2026-01-10 18:10:55,190 | INFO     | job 6965384043 has completed (purged errors)
[2026-01-10 19:11:33] 2026-01-10 18:10:55,190 | INFO     | overall cleanup function is called
[2026-01-10 19:11:33] 2026-01-10 18:10:56,204 | INFO     | --- collectZombieJob: --- 10, [14769]
[2026-01-10 19:11:33] 2026-01-10 18:10:56,204 | INFO     | zombie collector waiting for pid 14769
[2026-01-10 19:11:33] 2026-01-10 18:10:56,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:11:33] 2026-01-10 18:10:56,204 | INFO     | collected zombie processes
[2026-01-10 19:11:33] 2026-01-10 18:10:56,205 | INFO     | will attempt to kill all subprocesses of pid=14769
[2026-01-10 19:11:33] 2026-01-10 18:10:56,286 | INFO     | process IDs to be killed: [14769] (in reverse order)
[2026-01-10 19:11:33] 2026-01-10 18:10:57,310 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:11:33] 2026-01-10 18:10:57,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:11:33] 2026-01-10 18:10:57,313 | INFO     | did not find any defunct processes belonging to 14769
[2026-01-10 19:11:33] 2026-01-10 18:10:57,315 | INFO     | did not find any defunct processes belonging to 14769
[2026-01-10 19:11:33] 2026-01-10 18:10:57,315 | INFO     | ready for new job
[2026-01-10 19:11:33] 2026-01-10 18:10:57,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:11:33] 2026-01-10 18:10:57,316 | INFO     | ***************************************
[2026-01-10 19:11:33] 2026-01-10 18:10:57,317 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:11:33] 2026-01-10 18:10:57,317 | INFO     | ***************************************
[2026-01-10 19:11:33] 2026-01-10 18:10:57,317 | INFO     | 
[2026-01-10 19:11:33] 2026-01-10 18:10:57,317 | INFO     | pilot is running in a VM
[2026-01-10 19:11:33] 2026-01-10 18:10:57,318 | INFO     | architecture information:
[2026-01-10 19:11:33] 2026-01-10 18:10:57,329 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:11:33] 2026-01-10 18:10:57,609 | INFO     | cat /etc/os-release:
[2026-01-10 19:11:33] NAME="CentOS Linux"
[2026-01-10 19:11:33] VERSION="7 (Core)"
[2026-01-10 19:11:33] ID="centos"
[2026-01-10 19:11:33] ID_LIKE="rhel fedora"
[2026-01-10 19:11:33] VERSION_ID="7"
[2026-01-10 19:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:11:33] ANSI_COLOR="0;31"
[2026-01-10 19:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:11:33] HOME_URL="https://www.centos.org/"
[2026-01-10 19:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:11:33] 
[2026-01-10 19:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:11:33] 
[2026-01-10 19:11:33] 2026-01-10 18:10:57,610 | INFO     | ***************************************
[2026-01-10 19:11:33] 2026-01-10 18:10:58,113 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-10 19:11:33] 2026-01-10 18:10:58,358 | INFO     | sufficient remaining disk space (497445502976 B)
[2026-01-10 19:11:33] 2026-01-10 18:10:58,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:11:33] 2026-01-10 18:10:58,358 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:11:33] 2026-01-10 18:10:58,359 | INFO     | update_server=False
[2026-01-10 19:11:33] 2026-01-10 18:10:58,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:11:33] 2026-01-10 18:10:58,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:11:33] 2026-01-10 18:10:58,359 | INFO     | aborting loop
[2026-01-10 19:11:33] 2026-01-10 18:10:58,872 | INFO     | all data control threads have been joined
[2026-01-10 19:11:33] 2026-01-10 18:10:58,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:11:33] 2026-01-10 18:10:59,229 | INFO     | all job control threads have been joined
[2026-01-10 19:11:33] 2026-01-10 18:10:59,321 | INFO     | all payload control threads have been joined
[2026-01-10 19:11:33] 2026-01-10 18:10:59,365 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:10:59,366 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:10:59,456 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:10:59,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:11:33] 2026-01-10 18:10:59,878 | INFO     | [data] control thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,102 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,229 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,230 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,235 | INFO     | [job] control thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,327 | INFO     | [payload] control thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,428 | INFO     | [job] validate thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,560 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,569 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,681 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:00,973 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:01,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:11:33] 2026-01-10 18:11:02,397 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:11:33] 2026-01-10 18:11:05,098 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:11:33] 2026-01-10 18:11:05,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445470013248)>', '<ExcThread(monitor, started 140444742702848)>']
[2026-01-10 19:11:33] 2026-01-10 18:11:10,440 | INFO     | all workflow threads have been joined
[2026-01-10 19:11:33] 2026-01-10 18:11:10,440 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:11:33] 2026-01-10 18:11:10,441 | INFO     | traces error code: 0
[2026-01-10 19:11:33] 2026-01-10 18:11:10,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | INFO     | PID=8266 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | INFO     | .. there are 2 such processes running
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:11:33] 2026-01-10 18:11:27,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:11:33] 2026-01-10 18:11:27,562 | INFO     | [monitor] control thread has ended
[2026-01-10 19:11:33] 2026-01-10 18:11:27,934 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:11:33] 2026-01-10 18:11:28,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:11:33] 2026-01-10 18:11:28,127 [wrapper] pilotpid: 8266
[2026-01-10 19:11:33] 2026-01-10 18:11:28,227 [wrapper] Pilot exit status: 0
[2026-01-10 19:11:33] 2026-01-10 18:11:28,709 [wrapper] pandaids: 6965384043
[2026-01-10 19:11:33] 2026-01-10 18:11:29,517 [wrapper] cleanup supervisor_pilot 29577 8267
[2026-01-10 19:11:33] 2026-01-10 18:11:29,630 [wrapper] Test setup, not cleaning
[2026-01-10 19:11:33] 2026-01-10 18:11:29,723 [wrapper] apfmon messages muted
[2026-01-10 19:11:33] 2026-01-10 18:11:29,836 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:11:33] 2026-01-10 18:11:29,954 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:11:33]  *** Error codes and diagnostics ***
[2026-01-10 19:11:33]     "exeErrorCode": 0,
[2026-01-10 19:11:33]     "exeErrorDiag": "",
[2026-01-10 19:11:33]     "pilotErrorCode": 0,
[2026-01-10 19:11:33]     "pilotErrorDiag": "",
[2026-01-10 19:11:33]  *** Listing of results directory ***
[2026-01-10 19:11:33] total 434632
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-10 19:11:33] -rwx------. 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:15 queuedata.json
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc       100 Jan 10 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:11:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 16:57 run_atlas
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc       105 Jan 10 16:57 job.xml
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc      6390 Jan 10 16:57 init_data.xml
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc 392755774 Jan 10 16:57 EVNT.47962006._000073.pool.root.1
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc     15847 Jan 10 16:57 start_atlas.sh
[2026-01-10 19:11:33] drwxrwx--x. 2 boinc boinc        68 Jan 10 16:57 shared
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc    592616 Jan 10 16:57 input.tar.gz
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc         0 Jan 10 16:57 boinc_lockfile
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc      2890 Jan 10 16:57 pandaJob.out
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc    989556 Jan 10 17:01 agis_schedconf.cvmfs.json
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc   1516240 Jan 10 17:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:11:33] drwx------. 5 boinc boinc      4096 Jan 10 17:01 pilot3
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc       530 Jan 10 18:46 boinc_task_state.xml
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc  43760612 Jan 10 19:08 HITS.47962010._002184.pool.root.1
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc      1016 Jan 10 19:08 memory_monitor_summary.json
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc   1249670 Jan 10 19:08 log.47962010._002184.job.log.tgz.1
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc        95 Jan 10 19:10 pilot_heartbeat.json
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc      8586 Jan 10 19:10 heartbeat.json
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc      8192 Jan 10 19:11 boinc_mmap_file
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc        27 Jan 10 19:11 wrapper_checkpoint.txt
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc       819 Jan 10 19:11 pilotlog.txt
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc   1071148 Jan 10 19:11 log.47962010._002184.job.log.1
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc       353 Jan 10 19:11 output.list
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc       620 Jan 10 19:11 runtime_log
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc   2344960 Jan 10 19:11 result.tar.gz
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc      8832 Jan 10 19:11 runtime_log.err
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc       654 Jan 10 19:11 lYGKDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmepmKDmKsgfOo.diag
[2026-01-10 19:11:33] -rw-r--r--. 1 boinc boinc     21306 Jan 10 19:11 stderr.txt
[2026-01-10 19:11:33] HITS file was successfully produced:
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc 43760612 Jan 10 19:08 shared/HITS.pool.root.1
[2026-01-10 19:11:33]  *** Contents of shared directory: ***
[2026-01-10 19:11:33] total 429176
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc 392755774 Jan 10 16:57 ATLAS.root_0
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc     15847 Jan 10 16:57 start_atlas.sh
[2026-01-10 19:11:33] -rw-r--r--. 2 boinc boinc    592616 Jan 10 16:57 input.tar.gz
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc  43760612 Jan 10 19:08 HITS.pool.root.1
[2026-01-10 19:11:33] -rw-------. 1 boinc boinc   2344960 Jan 10 19:11 result.tar.gz
19:11:34 (4523): run_atlas exited; CPU time 17920.347539
19:11:34 (4523): called boinc_finish(0)

</stderr_txt>
]]>

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