Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:30 (1128383): wrapper (7.7.26015): starting
08:22:30 (1128383): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:22:30] Arguments: --nthreads 11
[2026-01-10 08:22:30] Threads: 11
[2026-01-10 08:22:30] Checking for CVMFS
[2026-01-10 08:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:22:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:22:31] 2.13.3.0 11793 94905 384796 154981 3 76 23500517 32935937 20799 16776704 0 356500421 99.507 466713590 34946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:22:31] CVMFS is ok
[2026-01-10 08:22:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:22:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:22:31] Further information can be found at the LHC@home message board.
[2026-01-10 08:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:22:31] Checking for apptainer binary...
[2026-01-10 08:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:22:31] Running /usr/bin/apptainer --version
[2026-01-10 08:22:31] apptainer version 1.4.5-2.el9
[2026-01-10 08:22:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:22:31] c6-2-11-2.aglt2.org
[2026-01-10 08:22:31] apptainer works
[2026-01-10 08:22:31] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:22:31] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:22:31] Starting ATLAS job with PandaID=6965384349
[2026-01-10 08:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:53:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:53:19] ]
[2026-01-10 09:53:19] 2026-01-10 14:51:43,003 | INFO     | time since job start (5340s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:43,036 | INFO     | transferring file log.47962010._002485.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965384349/log.47962010._002485.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:53:19] 2026-01-10 14:51:43,036 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965384349/log.47962010._002485.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002485.job
[2026-01-10 09:53:19] 2026-01-10 14:51:43,151 | INFO     | adding to output.list: log.47962010._002485.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9d/cf/log.47962010._002485.job.log.tgz.
[2026-01-10 09:53:19] 2026-01-10 14:51:43,152 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:53:19] 2026-01-10 14:51:43,152 | INFO     | summary of transferred files:
[2026-01-10 09:53:19] 2026-01-10 14:51:43,153 | INFO     |  -- lfn=log.47962010._002485.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:53:19] 2026-01-10 14:51:43,153 | INFO     | stage-out finished correctly
[2026-01-10 09:53:19] 2026-01-10 14:51:44,057 | INFO     | monitor loop #334: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:44,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:45,009 | INFO     | time since job start (5342s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:46,280 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:53:19] 2026-01-10 14:51:46,474 | INFO     | job 6965384349 has state=finished
[2026-01-10 09:53:19] 2026-01-10 14:51:46,474 | INFO     | preparing for final server update for job 6965384349 in state='finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:46,474 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:53:19] 2026-01-10 14:51:46,475 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:53:19] 2026-01-10 14:51:46,475 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:53:19] 2026-01-10 14:51:46,475 | INFO     | job 6965384349 has finished - writing final server update
[2026-01-10 09:53:19] 2026-01-10 14:51:46,476 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:53:19] 2026-01-10 14:51:46,477 | INFO     | executing command: lscpu
[2026-01-10 09:53:19] 2026-01-10 14:51:46,574 | INFO     | monitor loop #335: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:46,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:46,618 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:53:19] 2026-01-10 14:51:47,017 | INFO     | time since job start (5344s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:49,024 | INFO     | time since job start (5346s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:49,080 | INFO     | monitor loop #336: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:49,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:51,033 | INFO     | time since job start (5348s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:51,612 | INFO     | monitor loop #337: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:51,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:53,042 | INFO     | time since job start (5350s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:54,117 | INFO     | monitor loop #338: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:54,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:55,049 | INFO     | time since job start (5352s) is within the limit (349056.0s)
[2026-01-10 09:53:19] 2026-01-10 14:51:56,631 | INFO     | monitor loop #339: job 0:6965384349 is in state 'finished'
[2026-01-10 09:53:19] 2026-01-10 14:51:56,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:53:19] 2026-01-10 14:51:56,730 | INFO     | PID=1137755 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:53:19] 2026-01-10 14:51:56,730 | INFO     | .. there are 20 such processes running
[2026-01-10 09:53:19] 2026-01-10 14:51:57,370 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:53:19] 2026-01-10 14:51:57,384 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2708.743249999999
[2026-01-10 09:53:19] 2026-01-10 14:51:57,416 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384349/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,416 | INFO     | extracted standard info from prmon json
[2026-01-10 09:53:19] 2026-01-10 14:51:57,416 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:53:19] 2026-01-10 14:51:57,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:53:19] 2026-01-10 14:51:57,419 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:53:19] 2026-01-10 14:51:57,419 | INFO     | sum of square deviations: 158638322.19999978
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | sum of deviations: -5111591410.949998
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | mean x: 1768054110.15
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | mean y: 2832221.6625
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | intersect: 56972485444.19005
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | chi2: 0.8400236060439938
[2026-01-10 09:53:19] 2026-01-10 14:51:57,420 | INFO     | current memory leak: -32.22 B/s (using 80 data points, chi2=0.84)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | could have reported an average CPU frequency of 2721 MHz (6 samples)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | ..............................
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . Timing measurements:
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . get job = 0 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . initial setup = 2 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . payload setup = 7 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . stage-in = 0 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . payload execution = 5309 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . stage-out = 1 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,421 | INFO     | . log creation = 0 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,422 | INFO     | ..............................
[2026-01-10 09:53:19] 2026-01-10 14:51:57,523 | INFO     | 
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | job summary report
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | --------------------------------------------------
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | PanDA job id: 6965384349
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | task id: 47962010
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | errors: (none)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | pilot state: finished 
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | transexitcode: 0
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | exeerrorcode: 0
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | exeerrordiag: 
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | exitcode: 0
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | exitmsg: OK
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | cpuconsumptiontime: 16833 s
[2026-01-10 09:53:19] 2026-01-10 14:51:57,524 | INFO     | nevents: 50
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | neventsw: 0
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | pid: 1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | pgrp: 1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | corecount: 11
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | event service: False
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | sizes: {0: 2284398, 1: 2284597, 6: 2284859, 12: 2284887, 5321: 2312110, 5323: 2321104, 5326: 2321288, 5337: 2321534}
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | --------------------------------------------------
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | 
[2026-01-10 09:53:19] 2026-01-10 14:51:57,525 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,548 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:53:19] 2026-01-10 14:51:57,549 | INFO     | job 6965384349 has completed (purged errors)
[2026-01-10 09:53:19] 2026-01-10 14:51:57,549 | INFO     | overall cleanup function is called
[2026-01-10 09:53:19] 2026-01-10 14:51:58,565 | INFO     | --- collectZombieJob: --- 10, [1173045]
[2026-01-10 09:53:19] 2026-01-10 14:51:58,565 | INFO     | zombie collector waiting for pid 1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:58,566 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:53:19] 2026-01-10 14:51:58,566 | INFO     | collected zombie processes
[2026-01-10 09:53:19] 2026-01-10 14:51:58,566 | INFO     | will attempt to kill all subprocesses of pid=1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:59,025 | INFO     | process IDs to be killed: [1173045] (in reverse order)
[2026-01-10 09:53:19] 2026-01-10 14:51:59,182 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:53:19] 2026-01-10 14:51:59,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:53:19] 2026-01-10 14:51:59,265 | INFO     | did not find any defunct processes belonging to 1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:59,343 | INFO     | did not find any defunct processes belonging to 1173045
[2026-01-10 09:53:19] 2026-01-10 14:51:59,343 | INFO     | ready for new job
[2026-01-10 09:53:19] 2026-01-10 14:51:59,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:53:19] 2026-01-10 14:51:59,367 | INFO     | ***************************************
[2026-01-10 09:53:19] 2026-01-10 14:51:59,367 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:53:19] 2026-01-10 14:51:59,367 | INFO     | ***************************************
[2026-01-10 09:53:19] 2026-01-10 14:51:59,367 | INFO     | 
[2026-01-10 09:53:19] 2026-01-10 14:51:59,394 | INFO     | architecture information:
[2026-01-10 09:53:19] 2026-01-10 14:51:59,402 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:53:19] 2026-01-10 14:51:59,430 | INFO     | cat /etc/os-release:
[2026-01-10 09:53:19] NAME="CentOS Linux"
[2026-01-10 09:53:19] VERSION="7 (Core)"
[2026-01-10 09:53:19] ID="centos"
[2026-01-10 09:53:19] ID_LIKE="rhel fedora"
[2026-01-10 09:53:19] VERSION_ID="7"
[2026-01-10 09:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:53:19] ANSI_COLOR="0;31"
[2026-01-10 09:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:53:19] HOME_URL="https://www.centos.org/"
[2026-01-10 09:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:53:19] 
[2026-01-10 09:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:53:19] 
[2026-01-10 09:53:19] 2026-01-10 14:51:59,431 | INFO     | ***************************************
[2026-01-10 09:53:19] 2026-01-10 14:51:59,935 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:53:19] 2026-01-10 14:51:59,982 | INFO     | sufficient remaining disk space (94478794752 B)
[2026-01-10 09:53:19] 2026-01-10 14:51:59,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:53:19] 2026-01-10 14:51:59,982 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:53:19] 2026-01-10 14:51:59,982 | INFO     | update_server=False
[2026-01-10 09:53:19] 2026-01-10 14:51:59,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:53:19] 2026-01-10 14:52:00,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:53:19] 2026-01-10 14:52:00,160 | INFO     | aborting loop
[2026-01-10 09:53:19] 2026-01-10 14:52:00,197 | INFO     | all job control threads have been joined
[2026-01-10 09:53:19] 2026-01-10 14:52:00,671 | INFO     | all payload control threads have been joined
[2026-01-10 09:53:19] 2026-01-10 14:52:00,780 | INFO     | all data control threads have been joined
[2026-01-10 09:53:19] 2026-01-10 14:52:00,987 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,072 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,166 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,204 | INFO     | [job] control thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,371 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:53:19] 2026-01-10 14:52:01,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:53:19] 2026-01-10 14:52:01,677 | INFO     | [payload] control thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,715 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,786 | INFO     | [data] control thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:01,933 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:02,108 | INFO     | [job] validate thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:02,112 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:02,262 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:02,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:53:19] 2026-01-10 14:52:03,481 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:03,543 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:05,572 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:53:19] 2026-01-10 14:52:29,309 | INFO     | PID=1137755 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:53:19] 2026-01-10 14:52:29,310 | INFO     | .. there are 20 such processes running
[2026-01-10 09:53:19] 2026-01-10 14:52:29,310 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:53:19] 2026-01-10 14:52:29,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:53:19] 2026-01-10 14:52:29,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:53:19] 2026-01-10 14:52:40,273 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-10 09:53:19] 2026-01-10 14:52:52,016 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:53:19] 2026-01-10 14:52:53,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440728258368)>', '<ExcThread(monitor, started 140440212838144)>']
[2026-01-10 09:53:19] 2026-01-10 14:52:54,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:53:19] 2026-01-10 14:52:54,478 | INFO     | [monitor] control thread has ended
[2026-01-10 09:53:19] 2026-01-10 14:52:58,889 | INFO     | all workflow threads have been joined
[2026-01-10 09:53:19] 2026-01-10 14:52:58,889 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:53:19] 2026-01-10 14:52:58,890 | INFO     | traces error code: 0
[2026-01-10 09:53:19] 2026-01-10 14:52:58,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:53:19] 2026-01-10 14:52:59,161 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:53:19] 2026-01-10 14:52:59,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:53:19] 2026-01-10 14:52:59,197 [wrapper] pilotpid: 1137755
[2026-01-10 09:53:19] 2026-01-10 14:52:59,200 [wrapper] Pilot exit status: 0
[2026-01-10 09:53:19] 2026-01-10 14:52:59,224 [wrapper] pandaids: 6965384349
[2026-01-10 09:53:19] 2026-01-10 14:52:59,369 [wrapper] cleanup supervisor_pilot 1735194 1137757
[2026-01-10 09:53:19] 2026-01-10 14:52:59,383 [wrapper] Test setup, not cleaning
[2026-01-10 09:53:19] 2026-01-10 14:52:59,399 [wrapper] apfmon messages muted
[2026-01-10 09:53:19] 2026-01-10 14:52:59,417 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:53:19] 2026-01-10 14:52:59,436 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:53:19]  *** Error codes and diagnostics ***
[2026-01-10 09:53:19]     "exeErrorCode": 0,
[2026-01-10 09:53:19]     "exeErrorDiag": "",
[2026-01-10 09:53:19]     "pilotErrorCode": 0,
[2026-01-10 09:53:19]     "pilotErrorDiag": "",
[2026-01-10 09:53:19]  *** Listing of results directory ***
[2026-01-10 09:53:19] total 435020
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:53:19] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:53:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:22 run_atlas
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:22 job.xml
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas 391896450 Jan 10 08:22 EVNT.47962006._000020.pool.root.1
[2026-01-10 09:53:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:22 shared
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas    592620 Jan 10 08:22 input.tar.gz
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:22 boinc_lockfile
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:22 pandaJob.out
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas        57 Jan 10 08:22 setup.sh.local
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:53:19] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:37 boinc_task_state.xml
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 09:48 init_data.xml
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas  45175125 Jan 10 09:51 HITS.47962010._002485.pool.root.1
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas      1043 Jan 10 09:51 memory_monitor_summary.json
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas   1506909 Jan 10 09:51 log.47962010._002485.job.log.tgz.1
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas        95 Jan 10 09:51 pilot_heartbeat.json
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas      8579 Jan 10 09:51 heartbeat.json
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas      4824 Jan 10 09:52 pilotlog.txt
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas    726640 Jan 10 09:52 log.47962010._002485.job.log.1
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas       353 Jan 10 09:52 output.list
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:52 runtime_log
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas   2252800 Jan 10 09:52 result.tar.gz
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas      9349 Jan 10 09:52 runtime_log.err
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas       653 Jan 10 09:52 2URMDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8ahKDmwSTTom.diag
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:53 wrapper_checkpoint.txt
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:53 boinc_mmap_file
[2026-01-10 09:53:19] -rw-r--r--. 1 boincer umatlas     22569 Jan 10 09:53 stderr.txt
[2026-01-10 09:53:19] HITS file was successfully produced:
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas 45175125 Jan 10 09:51 shared/HITS.pool.root.1
[2026-01-10 09:53:19]  *** Contents of shared directory: ***
[2026-01-10 09:53:19] total 429636
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas 391896450 Jan 10 08:22 ATLAS.root_0
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas    592620 Jan 10 08:22 input.tar.gz
[2026-01-10 09:53:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas  45175125 Jan 10 09:51 HITS.pool.root.1
[2026-01-10 09:53:19] -rw-------. 1 boincer umatlas   2252800 Jan 10 09:52 result.tar.gz
09:53:21 (1128383): run_atlas exited; CPU time 16964.384104
09:53:21 (1128383): called boinc_finish(0)

</stderr_txt>
]]>

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