Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:21 (1118950): wrapper (7.7.26015): starting
08:22:21 (1118950): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:22:21] Arguments: --nthreads 11
[2026-01-10 08:22:21] Threads: 11
[2026-01-10 08:22:21] Checking for CVMFS
[2026-01-10 08:22:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:22:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:22:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:22:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:22:22] 2.13.3.0 11793 94904 384796 154981 3 73 23500483 32935937 20711 16776704 0 356478713 99.507 466713588 34946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:22:22] CVMFS is ok
[2026-01-10 08:22:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:22:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:22:22] Further information can be found at the LHC@home message board.
[2026-01-10 08:22:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:22:22] Checking for apptainer binary...
[2026-01-10 08:22:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:22:22] Running /usr/bin/apptainer --version
[2026-01-10 08:22:22] apptainer version 1.4.5-2.el9
[2026-01-10 08:22:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:22:22] c6-2-11-2.aglt2.org
[2026-01-10 08:22:22] apptainer works
[2026-01-10 08:22:22] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:22:22] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:22:22] Starting ATLAS job with PandaID=6965384318
[2026-01-10 08:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:49:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:49:52]  workdir=None
[2026-01-10 09:49:52] ]
[2026-01-10 09:49:52] 2026-01-10 14:49:05,431 | INFO     | transferring file log.47962010._002459.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965384318/log.47962010._002459.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:49:52] 2026-01-10 14:49:05,432 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384318/log.47962010._002459.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002459.job
[2026-01-10 09:49:52] 2026-01-10 14:49:05,462 | INFO     | adding to output.list: log.47962010._002459.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/d8/a6/log.47962010._002459.job.log.tgz.
[2026-01-10 09:49:52] 2026-01-10 14:49:05,463 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:49:52] 2026-01-10 14:49:05,463 | INFO     | summary of transferred files:
[2026-01-10 09:49:52] 2026-01-10 14:49:05,463 | INFO     |  -- lfn=log.47962010._002459.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:49:52] 2026-01-10 14:49:05,463 | INFO     | stage-out finished correctly
[2026-01-10 09:49:52] 2026-01-10 14:49:05,615 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:49:52] 2026-01-10 14:49:06,216 | INFO     | monitor loop #312: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:06,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:06,282 | INFO     | job 6965384318 has state=finished
[2026-01-10 09:49:52] 2026-01-10 14:49:06,283 | INFO     | preparing for final server update for job 6965384318 in state='finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:06,283 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:49:52] 2026-01-10 14:49:06,283 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:49:52] 2026-01-10 14:49:06,283 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:49:52] 2026-01-10 14:49:06,283 | INFO     | job 6965384318 has finished - writing final server update
[2026-01-10 09:49:52] 2026-01-10 14:49:06,284 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:49:52] 2026-01-10 14:49:06,299 | INFO     | executing command: lscpu
[2026-01-10 09:49:52] 2026-01-10 14:49:06,391 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:49:52] 2026-01-10 14:49:06,488 | INFO     | time since job start (5193s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:08,495 | INFO     | time since job start (5195s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:08,721 | INFO     | monitor loop #313: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:08,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:10,503 | INFO     | time since job start (5197s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:11,226 | INFO     | monitor loop #314: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:11,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:12,238 | INFO     | PID=1128252 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:49:52] 2026-01-10 14:49:12,238 | INFO     | .. there are 21 such processes running
[2026-01-10 09:49:52] 2026-01-10 14:49:13,239 | INFO     | time since job start (5200s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:13,730 | INFO     | monitor loop #315: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:13,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:15,255 | INFO     | time since job start (5202s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:16,235 | INFO     | monitor loop #316: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:16,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:17,262 | INFO     | time since job start (5204s) is within the limit (349056.0s)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,739 | INFO     | monitor loop #317: job 0:6965384318 is in state 'finished'
[2026-01-10 09:49:52] 2026-01-10 14:49:18,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,843 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:49:52] 2026-01-10 14:49:18,855 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2726.6426249999995
[2026-01-10 09:49:52] 2026-01-10 14:49:18,872 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384318/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,873 | INFO     | extracted standard info from prmon json
[2026-01-10 09:49:52] 2026-01-10 14:49:18,873 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:49:52] 2026-01-10 14:49:18,873 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:49:52] 2026-01-10 14:49:18,875 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | sum of square deviations: 147067017.44871816
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | sum of deviations: -167756088.16666365
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | mean x: 1768054038.1410255
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | mean y: 2899386.8333333335
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | intersect: 2019679452.4876583
[2026-01-10 09:49:52] 2026-01-10 14:49:18,876 | INFO     | chi2: 0.7163758128511791
[2026-01-10 09:49:52] 2026-01-10 14:49:18,877 | INFO     | current memory leak: -1.14 B/s (using 78 data points, chi2=0.72)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,877 | INFO     | could have reported an average CPU frequency of 2741 MHz (6 samples)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,877 | INFO     | ..............................
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . Timing measurements:
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . get job = 0 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . initial setup = 2 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . payload setup = 6 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . stage-in = 0 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . payload execution = 5162 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . stage-out = 1 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | . log creation = 0 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,878 | INFO     | ..............................
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | 
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | job summary report
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | --------------------------------------------------
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | PanDA job id: 6965384318
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | task id: 47962010
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | errors: (none)
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:49:52] 2026-01-10 14:49:18,975 | INFO     | pilot state: finished 
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | transexitcode: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | exeerrorcode: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | exeerrordiag: 
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | exitcode: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | exitmsg: OK
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | cpuconsumptiontime: 16544 s
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | nevents: 50
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | neventsw: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | pid: 1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | pgrp: 1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | corecount: 11
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | event service: False
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | sizes: {0: 2284398, 1: 2284597, 5: 2284859, 11: 2284915, 5173: 2311959, 5174: 2311958, 5176: 2321192, 5189: 2321382}
[2026-01-10 09:49:52] 2026-01-10 14:49:18,976 | INFO     | --------------------------------------------------
[2026-01-10 09:49:52] 2026-01-10 14:49:18,977 | INFO     | 
[2026-01-10 09:49:52] 2026-01-10 14:49:18,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:49:52] 2026-01-10 14:49:19,005 | INFO     | job 6965384318 has completed (purged errors)
[2026-01-10 09:49:52] 2026-01-10 14:49:19,006 | INFO     | overall cleanup function is called
[2026-01-10 09:49:52] 2026-01-10 14:49:20,021 | INFO     | --- collectZombieJob: --- 10, [1157129]
[2026-01-10 09:49:52] 2026-01-10 14:49:20,021 | INFO     | zombie collector waiting for pid 1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:20,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:49:52] 2026-01-10 14:49:20,022 | INFO     | collected zombie processes
[2026-01-10 09:49:52] 2026-01-10 14:49:20,022 | INFO     | will attempt to kill all subprocesses of pid=1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:20,809 | INFO     | process IDs to be killed: [1157129] (in reverse order)
[2026-01-10 09:49:52] 2026-01-10 14:49:20,998 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:49:52] 2026-01-10 14:49:20,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:49:52] 2026-01-10 14:49:21,018 | INFO     | did not find any defunct processes belonging to 1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:21,037 | INFO     | did not find any defunct processes belonging to 1157129
[2026-01-10 09:49:52] 2026-01-10 14:49:21,037 | INFO     | ready for new job
[2026-01-10 09:49:52] 2026-01-10 14:49:21,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:49:52] 2026-01-10 14:49:21,039 | INFO     | ***************************************
[2026-01-10 09:49:52] 2026-01-10 14:49:21,039 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:49:52] 2026-01-10 14:49:21,040 | INFO     | ***************************************
[2026-01-10 09:49:52] 2026-01-10 14:49:21,040 | INFO     | 
[2026-01-10 09:49:52] 2026-01-10 14:49:21,045 | INFO     | architecture information:
[2026-01-10 09:49:52] 2026-01-10 14:49:21,046 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:49:52] 2026-01-10 14:49:21,065 | INFO     | cat /etc/os-release:
[2026-01-10 09:49:52] NAME="CentOS Linux"
[2026-01-10 09:49:52] VERSION="7 (Core)"
[2026-01-10 09:49:52] ID="centos"
[2026-01-10 09:49:52] ID_LIKE="rhel fedora"
[2026-01-10 09:49:52] VERSION_ID="7"
[2026-01-10 09:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:49:52] ANSI_COLOR="0;31"
[2026-01-10 09:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:49:52] HOME_URL="https://www.centos.org/"
[2026-01-10 09:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:49:52] 
[2026-01-10 09:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:49:52] 
[2026-01-10 09:49:52] 2026-01-10 14:49:21,065 | INFO     | ***************************************
[2026-01-10 09:49:52] 2026-01-10 14:49:21,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:49:52] 2026-01-10 14:49:21,617 | INFO     | sufficient remaining disk space (93625253888 B)
[2026-01-10 09:49:52] 2026-01-10 14:49:21,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:49:52] 2026-01-10 14:49:21,617 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:49:52] 2026-01-10 14:49:21,617 | INFO     | update_server=False
[2026-01-10 09:49:52] 2026-01-10 14:49:21,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:49:52] 2026-01-10 14:49:21,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:49:52] 2026-01-10 14:49:21,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:49:52] 2026-01-10 14:49:22,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:49:52] 2026-01-10 14:49:22,257 | INFO     | aborting loop
[2026-01-10 09:49:52] 2026-01-10 14:49:22,469 | INFO     | all data control threads have been joined
[2026-01-10 09:49:52] 2026-01-10 14:49:22,623 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:22,652 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:22,729 | INFO     | all payload control threads have been joined
[2026-01-10 09:49:52] 2026-01-10 14:49:22,977 | INFO     | all job control threads have been joined
[2026-01-10 09:49:52] 2026-01-10 14:49:22,998 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:22,999 | INFO     | [job] validate thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,277 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,399 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,476 | INFO     | [data] control thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,631 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,735 | INFO     | [payload] control thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,829 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,961 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,983 | INFO     | [job] control thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:23,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:49:52] 2026-01-10 14:49:24,003 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:24,997 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:25,631 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:32,667 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:49:52] 2026-01-10 14:49:33,674 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:49:52] 2026-01-10 14:49:42,446 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:49:52] 2026-01-10 14:49:43,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904073865024)>', '<ExcThread(monitor, started 139903560038144)>']
[2026-01-10 09:49:52] 2026-01-10 14:49:48,528 | INFO     | all workflow threads have been joined
[2026-01-10 09:49:52] 2026-01-10 14:49:48,528 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:49:52] 2026-01-10 14:49:48,529 | INFO     | traces error code: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:48,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:49:52] 2026-01-10 14:49:51,907 | INFO     | PID=1128252 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | INFO     | .. there are 21 such processes running
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:49:52] 2026-01-10 14:49:51,908 | INFO     | [monitor] control thread has ended
[2026-01-10 09:49:52] 2026-01-10 14:49:52,084 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:49:52] 2026-01-10 14:49:52,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:49:52] 2026-01-10 14:49:52,092 [wrapper] pilotpid: 1128252
[2026-01-10 09:49:52] 2026-01-10 14:49:52,094 [wrapper] Pilot exit status: 0
[2026-01-10 09:49:52] 2026-01-10 14:49:52,110 [wrapper] pandaids: 6965384318
[2026-01-10 09:49:52] 2026-01-10 14:49:52,201 [wrapper] cleanup supervisor_pilot 1633444 1128254
[2026-01-10 09:49:52] 2026-01-10 14:49:52,204 [wrapper] Test setup, not cleaning
[2026-01-10 09:49:52] 2026-01-10 14:49:52,207 [wrapper] apfmon messages muted
[2026-01-10 09:49:52] 2026-01-10 14:49:52,209 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:49:52] 2026-01-10 14:49:52,211 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:49:52]  *** Error codes and diagnostics ***
[2026-01-10 09:49:52]     "exeErrorCode": 0,
[2026-01-10 09:49:52]     "exeErrorDiag": "",
[2026-01-10 09:49:52]     "pilotErrorCode": 0,
[2026-01-10 09:49:52]     "pilotErrorDiag": "",
[2026-01-10 09:49:52]  *** Listing of results directory ***
[2026-01-10 09:49:52] total 442436
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:49:52] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:49:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:22 run_atlas
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:22 job.xml
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 08:22 EVNT.47962006._000013.pool.root.1
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:49:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:22 shared
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 08:22 input.tar.gz
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:22 boinc_lockfile
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:22 pandaJob.out
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas        57 Jan 10 08:22 setup.sh.local
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:49:52] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:37 boinc_task_state.xml
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 09:48 init_data.xml
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas  48548471 Jan 10 09:48 HITS.47962010._002459.pool.root.1
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas      1043 Jan 10 09:48 memory_monitor_summary.json
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas   1509559 Jan 10 09:49 log.47962010._002459.job.log.tgz.1
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas        95 Jan 10 09:49 pilot_heartbeat.json
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas      8574 Jan 10 09:49 heartbeat.json
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:49 wrapper_checkpoint.txt
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:49 boinc_mmap_file
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas       823 Jan 10 09:49 pilotlog.txt
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas    696236 Jan 10 09:49 log.47962010._002459.job.log.1
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas       353 Jan 10 09:49 output.list
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:49 runtime_log
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas   2222080 Jan 10 09:49 result.tar.gz
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas      9349 Jan 10 09:49 runtime_log.err
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas       653 Jan 10 09:49 OY7LDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtahKDmoQtOVn.diag
[2026-01-10 09:49:52] -rw-r--r--. 1 boincer umatlas     22492 Jan 10 09:49 stderr.txt
[2026-01-10 09:49:52] HITS file was successfully produced:
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas 48548471 Jan 10 09:48 shared/HITS.pool.root.1
[2026-01-10 09:49:52]  *** Contents of shared directory: ***
[2026-01-10 09:49:52] total 437084
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas 396184497 Jan 10 08:22 ATLAS.root_0
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:49:52] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 08:22 input.tar.gz
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas  48548471 Jan 10 09:48 HITS.pool.root.1
[2026-01-10 09:49:52] -rw-------. 1 boincer umatlas   2222080 Jan 10 09:49 result.tar.gz
09:49:53 (1118950): run_atlas exited; CPU time 16657.193526
09:49:53 (1118950): called boinc_finish(0)

</stderr_txt>
]]>

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