Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:16 (809457): wrapper (7.7.26015): starting
08:21:16 (809457): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:21:16] Arguments: --nthreads 8
[2026-01-10 08:21:16] Threads: 8
[2026-01-10 08:21:16] Checking for CVMFS
[2026-01-10 08:21:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:17] 2.13.3.0 12204 24374 229656 154981 1 361 35543283 40960000 18929 16776704 0 95369095 99.669 95850828 35435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:21:17] CVMFS is ok
[2026-01-10 08:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:17] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:17] Checking for apptainer binary...
[2026-01-10 08:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:17] Running /usr/bin/apptainer --version
[2026-01-10 08:21:17] apptainer version 1.4.5-2.el9
[2026-01-10 08:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:17] c-212-15.aglt2.org
[2026-01-10 08:21:17] apptainer works
[2026-01-10 08:21:17] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:21:17] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:21:17] Starting ATLAS job with PandaID=6965384363
[2026-01-10 08:21:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:39:57]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:39:57]  status_code=0
[2026-01-10 09:39:57]  storage_token=
[2026-01-10 09:39:57]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6965384363/log.47962010._002499.job.log.tgz.1
[2026-01-10 09:39:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/41/80/log.47962010._002499.job.log.tgz.1
[2026-01-10 09:39:57]  workdir=None
[2026-01-10 09:39:57] ]
[2026-01-10 09:39:57] 2026-01-10 14:38:48,825 | INFO     | transferring file log.47962010._002499.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6965384363/log.47962010._002499.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:39:57] 2026-01-10 14:38:48,825 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6965384363/log.47962010._002499.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._002499.job
[2026-01-10 09:39:57] 2026-01-10 14:38:48,845 | INFO     | adding to output.list: log.47962010._002499.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/41/80/log.47962010._002499.job.log.tgz.
[2026-01-10 09:39:57] 2026-01-10 14:38:48,846 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:39:57] 2026-01-10 14:38:48,846 | INFO     | summary of transferred files:
[2026-01-10 09:39:57] 2026-01-10 14:38:48,846 | INFO     |  -- lfn=log.47962010._002499.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:39:57] 2026-01-10 14:38:48,846 | INFO     | stage-out finished correctly
[2026-01-10 09:39:57] 2026-01-10 14:38:48,917 | INFO     | time since job start (4637s) is within the limit (349056.0s)
[2026-01-10 09:39:57] 2026-01-10 14:38:49,025 | INFO     | monitor loop #321: job 0:6965384363 is in state 'finished'
[2026-01-10 09:39:57] 2026-01-10 14:38:49,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:39:57] 2026-01-10 14:38:50,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:39:57] 2026-01-10 14:38:50,928 | INFO     | time since job start (4639s) is within the limit (349056.0s)
[2026-01-10 09:39:57] 2026-01-10 14:38:51,529 | INFO     | monitor loop #322: job 0:6965384363 is in state 'finished'
[2026-01-10 09:39:57] 2026-01-10 14:38:51,529 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:39:57] 2026-01-10 14:38:52,419 | INFO     | PID=824404 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:39:57] 2026-01-10 14:38:52,419 | INFO     | .. there are 20 such processes running
[2026-01-10 09:39:57] 2026-01-10 14:38:52,475 | INFO     | job 6965384363 has state=finished
[2026-01-10 09:39:57] 2026-01-10 14:38:52,475 | INFO     | preparing for final server update for job 6965384363 in state='finished'
[2026-01-10 09:39:57] 2026-01-10 14:38:52,543 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 09:39:57] 2026-01-10 14:38:52,543 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:39:57] 2026-01-10 14:38:52,544 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:39:57] 2026-01-10 14:38:52,544 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:39:57] 2026-01-10 14:38:52,544 | INFO     | job 6965384363 has finished - writing final server update
[2026-01-10 09:39:57] 2026-01-10 14:38:52,544 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:39:57] 2026-01-10 14:38:52,546 | INFO     | executing command: lscpu
[2026-01-10 09:39:57] 2026-01-10 14:38:52,620 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:39:57] 2026-01-10 14:38:53,420 | INFO     | time since job start (4642s) is within the limit (349056.0s)
[2026-01-10 09:39:57] 2026-01-10 14:38:54,032 | INFO     | monitor loop #323: job 0:6965384363 is in state 'finished'
[2026-01-10 09:39:57] 2026-01-10 14:38:54,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:39:57] 2026-01-10 14:38:55,425 | INFO     | time since job start (4644s) is within the limit (349056.0s)
[2026-01-10 09:39:57] 2026-01-10 14:38:56,536 | INFO     | monitor loop #324: job 0:6965384363 is in state 'finished'
[2026-01-10 09:39:57] 2026-01-10 14:38:56,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,339 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:39:57] 2026-01-10 14:38:57,354 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3306.0767395833336
[2026-01-10 09:39:57] 2026-01-10 14:38:57,368 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384363/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,369 | INFO     | extracted standard info from prmon json
[2026-01-10 09:39:57] 2026-01-10 14:38:57,370 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:39:57] 2026-01-10 14:38:57,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:39:57] 2026-01-10 14:38:57,372 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:39:57] 2026-01-10 14:38:57,372 | INFO     | sum of square deviations: 101844517.65217397
[2026-01-10 09:39:57] 2026-01-10 14:38:57,378 | INFO     | sum of deviations: 6505785965.521737
[2026-01-10 09:39:57] 2026-01-10 14:38:57,378 | INFO     | mean x: 1768053703.347826
[2026-01-10 09:39:57] 2026-01-10 14:38:57,378 | INFO     | mean y: 2550140.4782608696
[2026-01-10 09:39:57] 2026-01-10 14:38:57,378 | INFO     | intersect: -112939994384.23909
[2026-01-10 09:39:57] 2026-01-10 14:38:57,378 | INFO     | chi2: 0.0803893552093528
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | current memory leak: 63.88 B/s (using 69 data points, chi2=0.08)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | could have reported an average CPU frequency of 3262 MHz (6 samples)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | ..............................
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . Timing measurements:
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . get job = 0 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . initial setup = 2 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . payload setup = 8 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . stage-in = 0 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,379 | INFO     | . payload execution = 4607 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,380 | INFO     | . stage-out = 0 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,380 | INFO     | . log creation = 0 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,380 | INFO     | ..............................
[2026-01-10 09:39:57] 2026-01-10 14:38:57,433 | INFO     | time since job start (4646s) is within the limit (349056.0s)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | 
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | job summary report
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | --------------------------------------------------
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | PanDA job id: 6965384363
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | task id: 47962010
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | errors: (none)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:39:57] 2026-01-10 14:38:57,451 | INFO     | pilot state: finished 
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | transexitcode: 0
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | exeerrorcode: 0
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | exeerrordiag: 
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | exitcode: 0
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | exitmsg: OK
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | cpuconsumptiontime: 11656 s
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | nevents: 50
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | neventsw: 0
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | pid: 849952
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | pgrp: 849952
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | corecount: 8
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | event service: False
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | sizes: {0: 2284342, 1: 2284597, 6: 2284859, 12: 2284887, 4619: 2311855, 4620: 2321032, 4622: 2321032, 4629: 2321278}
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | --------------------------------------------------
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | 
[2026-01-10 09:39:57] 2026-01-10 14:38:57,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,477 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:39:57] 2026-01-10 14:38:57,477 | INFO     | job 6965384363 has completed (purged errors)
[2026-01-10 09:39:57] 2026-01-10 14:38:57,477 | INFO     | overall cleanup function is called
[2026-01-10 09:39:57] 2026-01-10 14:38:58,493 | INFO     | --- collectZombieJob: --- 10, [849952]
[2026-01-10 09:39:57] 2026-01-10 14:38:58,494 | INFO     | zombie collector waiting for pid 849952
[2026-01-10 09:39:57] 2026-01-10 14:38:58,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:39:57] 2026-01-10 14:38:58,494 | INFO     | collected zombie processes
[2026-01-10 09:39:57] 2026-01-10 14:38:58,494 | INFO     | will attempt to kill all subprocesses of pid=849952
[2026-01-10 09:39:57] 2026-01-10 14:38:58,879 | INFO     | process IDs to be killed: [849952] (in reverse order)
[2026-01-10 09:39:57] 2026-01-10 14:38:59,016 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:39:57] 2026-01-10 14:38:59,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:39:57] 2026-01-10 14:38:59,032 | INFO     | did not find any defunct processes belonging to 849952
[2026-01-10 09:39:57] 2026-01-10 14:38:59,044 | INFO     | did not find any defunct processes belonging to 849952
[2026-01-10 09:39:57] 2026-01-10 14:38:59,044 | INFO     | ready for new job
[2026-01-10 09:39:57] 2026-01-10 14:38:59,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:39:57] 2026-01-10 14:38:59,046 | INFO     | ***************************************
[2026-01-10 09:39:57] 2026-01-10 14:38:59,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:39:57] 2026-01-10 14:38:59,046 | INFO     | ***************************************
[2026-01-10 09:39:57] 2026-01-10 14:38:59,046 | INFO     | 
[2026-01-10 09:39:57] 2026-01-10 14:38:59,051 | INFO     | architecture information:
[2026-01-10 09:39:57] 2026-01-10 14:38:59,052 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:39:57] 2026-01-10 14:38:59,069 | INFO     | cat /etc/os-release:
[2026-01-10 09:39:57] NAME="CentOS Linux"
[2026-01-10 09:39:57] VERSION="7 (Core)"
[2026-01-10 09:39:57] ID="centos"
[2026-01-10 09:39:57] ID_LIKE="rhel fedora"
[2026-01-10 09:39:57] VERSION_ID="7"
[2026-01-10 09:39:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:39:57] ANSI_COLOR="0;31"
[2026-01-10 09:39:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:39:57] HOME_URL="https://www.centos.org/"
[2026-01-10 09:39:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:39:57] 
[2026-01-10 09:39:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:39:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:39:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:39:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:39:57] 
[2026-01-10 09:39:57] 2026-01-10 14:38:59,070 | INFO     | ***************************************
[2026-01-10 09:39:57] 2026-01-10 14:38:59,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 09:39:57] 2026-01-10 14:38:59,591 | INFO     | sufficient remaining disk space (128773521408 B)
[2026-01-10 09:39:57] 2026-01-10 14:38:59,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:39:57] 2026-01-10 14:38:59,591 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:39:57] 2026-01-10 14:38:59,591 | INFO     | update_server=False
[2026-01-10 09:39:57] 2026-01-10 14:38:59,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:39:57] 2026-01-10 14:38:59,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:39:57] 2026-01-10 14:39:00,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:39:57] 2026-01-10 14:39:00,045 | INFO     | aborting loop
[2026-01-10 09:39:57] 2026-01-10 14:39:00,061 | INFO     | all payload control threads have been joined
[2026-01-10 09:39:57] 2026-01-10 14:39:00,372 | INFO     | all data control threads have been joined
[2026-01-10 09:39:57] 2026-01-10 14:39:00,598 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:00,869 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,050 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,067 | INFO     | [payload] control thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,111 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,146 | INFO     | all job control threads have been joined
[2026-01-10 09:39:57] 2026-01-10 14:39:01,226 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:39:57] 2026-01-10 14:39:01,377 | INFO     | [data] control thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,402 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,415 | INFO     | [job] validate thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,598 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,643 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:01,980 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:02,008 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:02,151 | INFO     | [job] control thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:02,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:39:57] 2026-01-10 14:39:03,467 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:05,233 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:10,588 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:39:57] 2026-01-10 14:39:11,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:39:57] 2026-01-10 14:39:31,010 | INFO     | PID=824404 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 09:39:57] 2026-01-10 14:39:31,010 | INFO     | .. there are 20 such processes running
[2026-01-10 09:39:57] 2026-01-10 14:39:31,010 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:39:57] 2026-01-10 14:39:31,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:39:57] 2026-01-10 14:39:31,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:39:57] 2026-01-10 14:39:39,286 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:39:57] 2026-01-10 14:39:39,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803332859712)>', '<ExcThread(monitor, started 139802963851008)>']
[2026-01-10 09:39:57] 2026-01-10 14:39:40,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:39:57] 2026-01-10 14:39:40,059 | INFO     | [monitor] control thread has ended
[2026-01-10 09:39:57] 2026-01-10 14:39:44,628 | INFO     | all workflow threads have been joined
[2026-01-10 09:39:57] 2026-01-10 14:39:44,629 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:39:57] 2026-01-10 14:39:44,629 | INFO     | traces error code: 0
[2026-01-10 09:39:57] 2026-01-10 14:39:44,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:39:57] 2026-01-10 14:39:44,834 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:39:57] 2026-01-10 14:39:44,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:39:57] 2026-01-10 14:39:44,840 [wrapper] pilotpid: 824404
[2026-01-10 09:39:57] 2026-01-10 14:39:44,843 [wrapper] Pilot exit status: 0
[2026-01-10 09:39:57] 2026-01-10 14:39:44,854 [wrapper] pandaids: 6965384363
[2026-01-10 09:39:57] 2026-01-10 14:39:44,971 [wrapper] cleanup supervisor_pilot 1423409 824405
[2026-01-10 09:39:57] 2026-01-10 14:39:44,975 [wrapper] Test setup, not cleaning
[2026-01-10 09:39:57] 2026-01-10 14:39:44,978 [wrapper] apfmon messages muted
[2026-01-10 09:39:57] 2026-01-10 14:39:44,981 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:39:57] 2026-01-10 14:39:44,984 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:39:57]  *** Error codes and diagnostics ***
[2026-01-10 09:39:57]     "exeErrorCode": 0,
[2026-01-10 09:39:57]     "exeErrorDiag": "",
[2026-01-10 09:39:57]     "pilotErrorCode": 0,
[2026-01-10 09:39:57]     "pilotErrorDiag": "",
[2026-01-10 09:39:57]  *** Listing of results directory ***
[2026-01-10 09:39:57] total 432928
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:39:57] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:39:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas 392129520 Jan 10 08:21 EVNT.47962006._000023.pool.root.1
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:39:57] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:21 shared
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:21 input.tar.gz
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:21 boinc_lockfile
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas    989556 Jan 10 08:21 agis_schedconf.cvmfs.json
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:39:57] drwx------. 5 boincer umatlas      4096 Jan 10 08:21 pilot3
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:34 boinc_task_state.xml
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas      6957 Jan 10 09:37 init_data.xml
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas  43519979 Jan 10 09:38 HITS.47962010._002499.pool.root.1
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas      1036 Jan 10 09:38 memory_monitor_summary.json
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas   1190922 Jan 10 09:38 log.47962010._002499.job.log.tgz.1
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas        95 Jan 10 09:38 pilot_heartbeat.json
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas      8539 Jan 10 09:38 heartbeat.json
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas      4896 Jan 10 09:39 pilotlog.txt
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas    680812 Jan 10 09:39 log.47962010._002499.job.log.1
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas       353 Jan 10 09:39 output.list
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:39 runtime_log
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas   1894400 Jan 10 09:39 result.tar.gz
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas       653 Jan 10 09:39 wLdMDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHbhKDmwVfM8m.diag
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 09:39 runtime_log.err
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:39 wrapper_checkpoint.txt
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:39 boinc_mmap_file
[2026-01-10 09:39:57] -rw-r--r--. 1 boincer umatlas     22277 Jan 10 09:39 stderr.txt
[2026-01-10 09:39:57] HITS file was successfully produced:
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas 43519979 Jan 10 09:38 shared/HITS.pool.root.1
[2026-01-10 09:39:57]  *** Contents of shared directory: ***
[2026-01-10 09:39:57] total 427896
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas 392129520 Jan 10 08:21 ATLAS.root_0
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:39:57] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:21 input.tar.gz
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas  43519979 Jan 10 09:38 HITS.pool.root.1
[2026-01-10 09:39:57] -rw-------. 1 boincer umatlas   1894400 Jan 10 09:39 result.tar.gz
09:39:59 (809457): run_atlas exited; CPU time 11649.316598
09:39:59 (809457): called boinc_finish(0)

</stderr_txt>
]]>

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