Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:39:50 (3798910): wrapper (7.7.26015): starting
16:39:50 (3798910): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 16:39:50] Arguments: --nthreads 3
[2026-01-10 16:39:50] Threads: 3
[2026-01-10 16:39:50] Checking for CVMFS
[2026-01-10 16:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:39:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:39:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:39:50] 2.9.2.0 2973026 3303 86928 154984 0 81 22231863 36864000 0 130560 0 2171182 99.989 122121 3038 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 16:39:50] CVMFS is ok
[2026-01-10 16:39:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 16:39:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 16:39:50] Further information can be found at the LHC@home message board.
[2026-01-10 16:39:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:39:50] Checking for apptainer binary...
[2026-01-10 16:39:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:39:50] Running /usr/bin/apptainer --version
[2026-01-10 16:39:50] apptainer version 1.4.1-1.1
[2026-01-10 16:39:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:39:50] atlasA228b
[2026-01-10 16:39:50] apptainer works
[2026-01-10 16:39:50] Set ATHENA_PROC_NUMBER=3
[2026-01-10 16:39:50] Set ATHENA_CORE_NUMBER=3
[2026-01-10 16:39:50] Starting ATLAS job with PandaID=6965384312
[2026-01-10 16:39:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:16:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:16:04] 2026-01-10 16:15:22,987 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:22,987 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,086 | INFO     | [job] control thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,154 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,162 | INFO     | all payload control threads have been joined
[2026-01-10 17:16:04] 2026-01-10 16:15:23,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:16:04] 2026-01-10 16:15:23,681 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,788 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,964 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:23,974 | INFO     | [data] control thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:24,114 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:24,130 | INFO     | [job] validate thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:24,168 | INFO     | [payload] control thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:24,195 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:24,249 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:25,416 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:25,988 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:16:04] 2026-01-10 16:15:51,520 | INFO     | PID=3802639 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:16:04] 2026-01-10 16:15:51,520 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:16:04] 2026-01-10 16:15:51,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:16:04] 2026-01-10 16:15:51,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:16:04] 2026-01-10 16:15:58,612 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:16:04] 2026-01-10 16:15:59,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165507036992)>', '<ExcThread(monitor, started 140164504479488)>']
[2026-01-10 17:16:04] 2026-01-10 16:16:00,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:16:04] 2026-01-10 16:16:00,569 | INFO     | [monitor] control thread has ended
[2026-01-10 17:16:04] 2026-01-10 16:16:04,622 | INFO     | all workflow threads have been joined
[2026-01-10 17:16:04] 2026-01-10 16:16:04,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:16:04] 2026-01-10 16:16:04,623 | INFO     | traces error code: 0
[2026-01-10 17:16:04] 2026-01-10 16:16:04,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:16:04] 2026-01-10 16:16:04,717 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:16:04] 2026-01-10 16:16:04,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:16:04] 2026-01-10 16:16:04,722 [wrapper] pilotpid: 3802639
[2026-01-10 17:16:04] 2026-01-10 16:16:04,725 [wrapper] Pilot exit status: 0
[2026-01-10 17:16:04] 2026-01-10 16:16:04,732 [wrapper] pandaids: 6965384312
[2026-01-10 17:16:04] 2026-01-10 16:16:04,752 [wrapper] cleanup supervisor_pilot 3816019 3802640
[2026-01-10 17:16:04] 2026-01-10 16:16:04,755 [wrapper] Test setup, not cleaning
[2026-01-10 17:16:04] 2026-01-10 16:16:04,758 [wrapper] apfmon messages muted
[2026-01-10 17:16:04] 2026-01-10 16:16:04,760 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:16:04] 2026-01-10 16:16:04,763 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:16:04]  *** Error codes and diagnostics ***
[2026-01-10 17:16:04]     "exeErrorCode": 0,
[2026-01-10 17:16:04]     "exeErrorDiag": "",
[2026-01-10 17:16:04]     "pilotErrorCode": 0,
[2026-01-10 17:16:04]     "pilotErrorDiag": "",
[2026-01-10 17:16:04]  *** Listing of results directory ***
[2026-01-10 17:16:04] total 432880
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-10 17:16:04] -rwx------ 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:15 queuedata.json
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc       100 Jan 10 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:16:04] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 16:39 run_atlas
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc       105 Jan 10 16:39 job.xml
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc 396184497 Jan 10 16:39 EVNT.47962006._000013.pool.root.1
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc    592613 Jan 10 16:39 input.tar.gz
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:39 start_atlas.sh
[2026-01-10 17:16:04] drwxrwx--x 2 boinc boinc      4096 Jan 10 16:39 shared
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc         0 Jan 10 16:39 boinc_setup_complete
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      6449 Jan 10 16:39 init_data.xml
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc         0 Jan 10 16:39 boinc_lockfile
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      2890 Jan 10 16:39 pandaJob.out
[2026-01-10 17:16:04] -rw------- 1 boinc boinc    989556 Jan 10 16:39 agis_schedconf.cvmfs.json
[2026-01-10 17:16:04] -rw------- 1 boinc boinc   1516240 Jan 10 16:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:16:04] drwx------ 5 boinc boinc      4096 Jan 10 16:39 pilot3
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc       528 Jan 10 17:11 boinc_task_state.xml
[2026-01-10 17:16:04] -rw------- 1 boinc boinc  41237547 Jan 10 17:15 HITS.47962010._002453.pool.root.1
[2026-01-10 17:16:04] -rw------- 1 boinc boinc        95 Jan 10 17:15 pilot_heartbeat.json
[2026-01-10 17:16:04] -rw------- 1 boinc boinc      1007 Jan 10 17:15 memory_monitor_summary.json
[2026-01-10 17:16:04] -rw------- 1 boinc boinc    623168 Jan 10 17:15 log.47962010._002453.job.log.tgz.1
[2026-01-10 17:16:04] -rw------- 1 boinc boinc      8514 Jan 10 17:15 heartbeat.json
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc        26 Jan 10 17:15 wrapper_checkpoint.txt
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:15 boinc_mmap_file
[2026-01-10 17:16:04] -rw------- 1 boinc boinc      4752 Jan 10 17:16 pilotlog.txt
[2026-01-10 17:16:04] -rw------- 1 boinc boinc    348295 Jan 10 17:16 log.47962010._002453.job.log.1
[2026-01-10 17:16:04] -rw------- 1 boinc boinc       353 Jan 10 17:16 output.list
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:16 runtime_log
[2026-01-10 17:16:04] -rw------- 1 boinc boinc    993280 Jan 10 17:16 result.tar.gz
[2026-01-10 17:16:04] -rw------- 1 boinc boinc       661 Jan 10 17:16 xK2LDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpahKDmNmZiBo.diag
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      8917 Jan 10 17:16 runtime_log.err
[2026-01-10 17:16:04] -rw-r--r-- 1 boinc boinc      6439 Jan 10 17:16 stderr.txt
[2026-01-10 17:16:04] HITS file was successfully produced:
[2026-01-10 17:16:04] -rw------- 1 boinc boinc 41237547 Jan 10 17:15 shared/HITS.pool.root.1
[2026-01-10 17:16:04]  *** Contents of shared directory: ***
[2026-01-10 17:16:04] total 428744
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc 396184497 Jan 10 16:39 ATLAS.root_0
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc    592613 Jan 10 16:39 input.tar.gz
[2026-01-10 17:16:04] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:39 start_atlas.sh
[2026-01-10 17:16:04] -rw------- 1 boinc boinc  41237547 Jan 10 17:15 HITS.pool.root.1
[2026-01-10 17:16:04] -rw------- 1 boinc boinc    993280 Jan 10 17:16 result.tar.gz
17:16:06 (3798910): run_atlas exited; CPU time 4819.527883
17:16:06 (3798910): called boinc_finish(0)

</stderr_txt>
]]>

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