Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:08:24 (2106568): wrapper (7.7.26015): starting
16:08:24 (2106568): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 16:08:24] Arguments: --nthreads 4
[2026-01-10 16:08:24] Threads: 4
[2026-01-10 16:08:24] Checking for CVMFS
[2026-01-10 16:08:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:08:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:08:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:08:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:08:24] 2.13.3.0 355230 4301 55224 154991 1 131 2766700 4096000 5925 130560 0 16662532 99.986 305780 4196 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 16:08:24] CVMFS is ok
[2026-01-10 16:08:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 16:08:24] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 16:08:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 16:08:24] Further information can be found at the LHC@home message board.
[2026-01-10 16:08:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:08:24] Checking for apptainer binary...
[2026-01-10 16:08:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 16:08:24] Running /usr/bin/apptainer --version
[2026-01-10 16:08:24] apptainer version 1.4.5
[2026-01-10 16:08:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:08:25] X-32-ubuntu
[2026-01-10 16:08:25] apptainer works
[2026-01-10 16:08:25] Set ATHENA_PROC_NUMBER=4
[2026-01-10 16:08:25] Set ATHENA_CORE_NUMBER=4
[2026-01-10 16:08:25] Starting ATLAS job with PandaID=6965384389
[2026-01-10 16:08:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:56:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:56:43]  is_altstaged=None
[2026-01-10 16:56:43]  is_tar=False
[2026-01-10 16:56:43]  lfn=log.47962010._002525.job.log.tgz.1
[2026-01-10 16:56:43]  mtime=0
[2026-01-10 16:56:43]  protocol_id=None
[2026-01-10 16:56:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 16:56:43]  replicas=None
[2026-01-10 16:56:43]  scope=mc16_13TeV
[2026-01-10 16:56:43]  status=None
[2026-01-10 16:56:43]  status_code=0
[2026-01-10 16:56:43]  storage_token=
[2026-01-10 16:56:43]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6965384389/log.47962010._002525.job.log.tgz.1
[2026-01-10 16:56:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/fa/4b/log.47962010._002525.job.log.tgz.1
[2026-01-10 16:56:43]  workdir=None
[2026-01-10 16:56:43] ]
[2026-01-10 16:56:43] 2026-01-10 21:56:01,312 | INFO     | transferring file log.47962010._002525.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6965384389/log.47962010._002525.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-10 16:56:43] 2026-01-10 21:56:01,312 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6965384389/log.47962010._002525.job.log.tgz.1 /var/lib/boinc/slots/2/log.47962010._002525.job
[2026-01-10 16:56:43] 2026-01-10 21:56:01,328 | INFO     | adding to output.list: log.47962010._002525.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/fa/4b/log.47962010._002525.job.log.tgz.
[2026-01-10 16:56:43] 2026-01-10 21:56:01,329 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 16:56:43] 2026-01-10 21:56:01,329 | INFO     | summary of transferred files:
[2026-01-10 16:56:43] 2026-01-10 21:56:01,329 | INFO     |  -- lfn=log.47962010._002525.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 16:56:43] 2026-01-10 21:56:01,329 | INFO     | stage-out finished correctly
[2026-01-10 16:56:43] 2026-01-10 21:56:01,914 | INFO     | time since job start (2848s) is within the limit (349056.0s)
[2026-01-10 16:56:43] 2026-01-10 21:56:02,108 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 16:56:43] 2026-01-10 21:56:03,915 | INFO     | time since job start (2850s) is within the limit (349056.0s)
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | job 6965384389 has state=finished
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | preparing for final server update for job 6965384389 in state='finished'
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | this job has now completed (state=finished)
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | log transfer has been attempted: DONE
[2026-01-10 16:56:43] 2026-01-10 21:56:04,569 | INFO     | job 6965384389 has finished - writing final server update
[2026-01-10 16:56:43] 2026-01-10 21:56:04,570 | INFO     | total number of processed events: 50 (read)
[2026-01-10 16:56:43] 2026-01-10 21:56:04,570 | INFO     | executing command: lscpu
[2026-01-10 16:56:43] 2026-01-10 21:56:04,599 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 16:56:43] 2026-01-10 21:56:05,325 | WARNING  | process 2117088 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 16:56:43] 2026-01-10 21:56:05,325 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6965384389/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:56:43] 2026-01-10 21:56:05,492 | INFO     | number of running child processes to parent process 2117088: 1
[2026-01-10 16:56:43] 2026-01-10 21:56:05,492 | INFO     | maximum number of monitored processes: 10
[2026-01-10 16:56:43] 2026-01-10 21:56:05,921 | INFO     | time since job start (2852s) is within the limit (349056.0s)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,487 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 16:56:43] 2026-01-10 21:56:07,491 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3867.577031250001
[2026-01-10 16:56:43] 2026-01-10 21:56:07,496 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6965384389/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,496 | INFO     | extracted standard info from prmon json
[2026-01-10 16:56:43] 2026-01-10 21:56:07,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:56:43] 2026-01-10 21:56:07,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:56:43] 2026-01-10 21:56:07,497 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:56:43] 2026-01-10 21:56:07,497 | INFO     | sum of square deviations: 19832930.0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | sum of deviations: -693465019.0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | mean x: 1768080830.5
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | mean y: 2055092.1
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | intersect: 61823591633.40874
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | chi2: 0.10085804032318325
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | current memory leak: -34.97 B/s (using 40 data points, chi2=0.10)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | could have reported an average CPU frequency of 3833 MHz (5 samples)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | ..............................
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | . Timing measurements:
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | . get job = 0 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | . initial setup = 2 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,498 | INFO     | . payload setup = 4 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,499 | INFO     | . stage-in = 0 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,499 | INFO     | . payload execution = 2825 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,499 | INFO     | . stage-out = 0 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,499 | INFO     | . log creation = 0 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,499 | INFO     | ..............................
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | 
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | job summary report
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | --------------------------------------------------
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | PanDA job id: 6965384389
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | task id: 47962010
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | errors: (none)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | pilot state: finished 
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | transexitcode: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | exeerrorcode: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,567 | INFO     | exeerrordiag: 
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | exitcode: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | exitmsg: OK
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | cpuconsumptiontime: 9400 s
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | nevents: 50
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | neventsw: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | pid: 2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | pgrp: 2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | corecount: 4
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | event service: False
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | sizes: {0: 2284569, 3: 2284831, 11: 2284859, 2833: 2319995, 2834: 2319995, 2839: 2320273}
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | --------------------------------------------------
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | 
[2026-01-10 16:56:43] 2026-01-10 21:56:07,568 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | job 6965384389 has completed (purged errors)
[2026-01-10 16:56:43] 2026-01-10 21:56:07,586 | INFO     | overall cleanup function is called
[2026-01-10 16:56:43] 2026-01-10 21:56:08,597 | INFO     | --- collectZombieJob: --- 10, [2117088]
[2026-01-10 16:56:43] 2026-01-10 21:56:08,597 | INFO     | zombie collector waiting for pid 2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:08,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:56:43] 2026-01-10 21:56:08,598 | INFO     | collected zombie processes
[2026-01-10 16:56:43] 2026-01-10 21:56:08,598 | INFO     | will attempt to kill all subprocesses of pid=2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:08,770 | INFO     | process IDs to be killed: [2117088] (in reverse order)
[2026-01-10 16:56:43] 2026-01-10 21:56:08,842 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:56:43] 2026-01-10 21:56:08,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:56:43] 2026-01-10 21:56:08,848 | INFO     | did not find any defunct processes belonging to 2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:08,852 | INFO     | did not find any defunct processes belonging to 2117088
[2026-01-10 16:56:43] 2026-01-10 21:56:08,852 | INFO     | ready for new job
[2026-01-10 16:56:43] 2026-01-10 21:56:08,852 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:56:43] 2026-01-10 21:56:08,853 | INFO     | ***************************************
[2026-01-10 16:56:43] 2026-01-10 21:56:08,853 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:56:43] 2026-01-10 21:56:08,853 | INFO     | ***************************************
[2026-01-10 16:56:43] 2026-01-10 21:56:08,853 | INFO     | 
[2026-01-10 16:56:43] 2026-01-10 21:56:08,855 | INFO     | architecture information:
[2026-01-10 16:56:43] 2026-01-10 21:56:08,855 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:56:43] 2026-01-10 21:56:08,867 | INFO     | cat /etc/os-release:
[2026-01-10 16:56:43] NAME="CentOS Linux"
[2026-01-10 16:56:43] VERSION="7 (Core)"
[2026-01-10 16:56:43] ID="centos"
[2026-01-10 16:56:43] ID_LIKE="rhel fedora"
[2026-01-10 16:56:43] VERSION_ID="7"
[2026-01-10 16:56:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:56:43] ANSI_COLOR="0;31"
[2026-01-10 16:56:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:56:43] HOME_URL="https://www.centos.org/"
[2026-01-10 16:56:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:56:43] 
[2026-01-10 16:56:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:56:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:56:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:56:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:56:43] 
[2026-01-10 16:56:43] 2026-01-10 21:56:08,867 | INFO     | ***************************************
[2026-01-10 16:56:43] 2026-01-10 21:56:09,370 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 16:56:43] 2026-01-10 21:56:09,383 | INFO     | sufficient remaining disk space (1797823397888 B)
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | INFO     | update_server=False
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:56:43] 2026-01-10 21:56:09,384 | INFO     | aborting loop
[2026-01-10 16:56:43] 2026-01-10 21:56:09,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:56:43] 2026-01-10 21:56:09,967 | INFO     | all payload control threads have been joined
[2026-01-10 16:56:43] 2026-01-10 21:56:09,978 | INFO     | all data control threads have been joined
[2026-01-10 16:56:43] 2026-01-10 21:56:10,389 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:10,389 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:10,389 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:10,736 | INFO     | all job control threads have been joined
[2026-01-10 16:56:43] 2026-01-10 21:56:10,870 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:10,973 | INFO     | [payload] control thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:10,979 | INFO     | [data] control thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,398 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,419 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,502 | INFO     | [job] validate thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,526 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,527 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,741 | INFO     | [job] control thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,888 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:11,963 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:12,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:56:43] 2026-01-10 21:56:16,684 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:20,236 | INFO     | job.realtimelogging is not enabled
[2026-01-10 16:56:43] 2026-01-10 21:56:21,241 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:56:43] 2026-01-10 21:56:38,004 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:56:43] 2026-01-10 21:56:38,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138113069799232)>', '<ExcThread(monitor, started 138112441243392)>']
[2026-01-10 16:56:43] 2026-01-10 21:56:39,192 | INFO     | PID=2110422 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:56:43] 2026-01-10 21:56:39,192 | INFO     | .. there are 8 such processes running
[2026-01-10 16:56:43] 2026-01-10 21:56:39,193 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:56:43] 2026-01-10 21:56:39,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:56:43] 2026-01-10 21:56:39,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:56:43] 2026-01-10 21:56:39,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:56:43] 2026-01-10 21:56:39,193 | INFO     | [monitor] control thread has ended
[2026-01-10 16:56:43] 2026-01-10 21:56:43,729 | INFO     | all workflow threads have been joined
[2026-01-10 16:56:43] 2026-01-10 21:56:43,729 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:56:43] 2026-01-10 21:56:43,729 | INFO     | traces error code: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:43,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:56:43] 2026-01-10 21:56:43,811 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:56:43] 2026-01-10 21:56:43,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:56:43] 2026-01-10 21:56:43,816 [wrapper] pilotpid: 2110422
[2026-01-10 16:56:43] 2026-01-10 21:56:43,818 [wrapper] Pilot exit status: 0
[2026-01-10 16:56:43] 2026-01-10 21:56:43,825 [wrapper] pandaids: 6965384389
[2026-01-10 16:56:43] 2026-01-10 21:56:43,866 [wrapper] cleanup supervisor_pilot 2241257 2110423
[2026-01-10 16:56:43] 2026-01-10 21:56:43,869 [wrapper] Test setup, not cleaning
[2026-01-10 16:56:43] 2026-01-10 21:56:43,871 [wrapper] apfmon messages muted
[2026-01-10 16:56:43] 2026-01-10 21:56:43,873 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:56:43] 2026-01-10 21:56:43,875 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:56:43]  *** Error codes and diagnostics ***
[2026-01-10 16:56:43]     "exeErrorCode": 0,
[2026-01-10 16:56:43]     "exeErrorDiag": "",
[2026-01-10 16:56:43]     "pilotErrorCode": 0,
[2026-01-10 16:56:43]     "pilotErrorDiag": "",
[2026-01-10 16:56:43]  *** Listing of results directory ***
[2026-01-10 16:56:43] total 432032
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 16:56:43] -rwx------ 1 boinc boinc     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc      5112 Jan 10 08:15 queuedata.json
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc       100 Jan 10 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:56:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 16:08 run_atlas
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc       105 Jan 10 16:08 job.xml
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc 391182854 Jan 10 16:08 EVNT.47962006._000032.pool.root.1
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:08 start_atlas.sh
[2026-01-10 16:56:43] drwxrwx--x 2 boinc boinc      4096 Jan 10 16:08 shared
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc    592624 Jan 10 16:08 input.tar.gz
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc      9667 Jan 10 16:08 init_data.xml
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc         0 Jan 10 16:08 boinc_lockfile
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc      2890 Jan 10 16:08 pandaJob.out
[2026-01-10 16:56:43] -rw------- 1 boinc boinc    989548 Jan 10 16:08 agis_schedconf.cvmfs.json
[2026-01-10 16:56:43] -rw------- 1 boinc boinc   1516240 Jan 10 16:08 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:56:43] drwx------ 5 boinc boinc      4096 Jan 10 16:08 pilot3
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc       528 Jan 10 16:50 boinc_task_state.xml
[2026-01-10 16:56:43] -rw------- 1 boinc boinc  44916213 Jan 10 16:55 HITS.47962010._002525.pool.root.1
[2026-01-10 16:56:43] -rw------- 1 boinc boinc      1017 Jan 10 16:55 memory_monitor_summary.json
[2026-01-10 16:56:43] -rw------- 1 boinc boinc    737691 Jan 10 16:56 log.47962010._002525.job.log.tgz.1
[2026-01-10 16:56:43] -rw------- 1 boinc boinc      8496 Jan 10 16:56 heartbeat.json
[2026-01-10 16:56:43] -rw------- 1 boinc boinc        95 Jan 10 16:56 pilot_heartbeat.json
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc      8192 Jan 10 16:56 boinc_mmap_file
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc        26 Jan 10 16:56 wrapper_checkpoint.txt
[2026-01-10 16:56:43] -rw------- 1 boinc boinc      4897 Jan 10 16:56 pilotlog.txt
[2026-01-10 16:56:43] -rw------- 1 boinc boinc    452971 Jan 10 16:56 log.47962010._002525.job.log.1
[2026-01-10 16:56:43] -rw------- 1 boinc boinc       353 Jan 10 16:56 output.list
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc       620 Jan 10 16:56 runtime_log
[2026-01-10 16:56:43] -rw------- 1 boinc boinc   1208320 Jan 10 16:56 result.tar.gz
[2026-01-10 16:56:43] -rw------- 1 boinc boinc       643 Jan 10 16:56 zPyMDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXbhKDmIJfoOn.diag
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc      8785 Jan 10 16:56 runtime_log.err
[2026-01-10 16:56:43] -rw-r--r-- 1 boinc boinc     21562 Jan 10 16:56 stderr.txt
[2026-01-10 16:56:43] HITS file was successfully produced:
[2026-01-10 16:56:43] -rw------- 1 boinc boinc 44916213 Jan 10 16:55 shared/HITS.pool.root.1
[2026-01-10 16:56:43]  *** Contents of shared directory: ***
[2026-01-10 16:56:43] total 427664
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc 391182854 Jan 10 16:08 ATLAS.root_0
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc     15847 Jan 10 16:08 start_atlas.sh
[2026-01-10 16:56:43] -rw-r--r-- 2 boinc boinc    592624 Jan 10 16:08 input.tar.gz
[2026-01-10 16:56:43] -rw------- 1 boinc boinc  44916213 Jan 10 16:55 HITS.pool.root.1
[2026-01-10 16:56:43] -rw------- 1 boinc boinc   1208320 Jan 10 16:56 result.tar.gz
16:56:45 (2106568): run_atlas exited; CPU time 9396.410235
16:56:45 (2106568): called boinc_finish(0)

</stderr_txt>
]]>

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