Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:02 (20207): wrapper (7.7.26015): starting
08:22:02 (20207): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:22:02] Arguments: --nthreads 8
[2026-01-10 08:22:02] Threads: 8
[2026-01-10 08:22:02] Checking for CVMFS
[2026-01-10 08:22:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:22:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:22:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:22:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:22:02] 2.11.2.0 14221 182521 139940 154981 3 17 10464275 18432001 35 130560 0 123077490 99.980 7010979 32191 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:22:02] CVMFS is ok
[2026-01-10 08:22:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:22:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:22:02] Further information can be found at the LHC@home message board.
[2026-01-10 08:22:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:22:02] Checking for apptainer binary...
[2026-01-10 08:22:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:22:02] Running /usr/bin/apptainer --version
[2026-01-10 08:22:02] apptainer version 1.3.2-1.el7
[2026-01-10 08:22:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:22:03] c-206-9.aglt2.org
[2026-01-10 08:22:03] apptainer works
[2026-01-10 08:22:03] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:22:03] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:22:03] Starting ATLAS job with PandaID=6965384246
[2026-01-10 08:22:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:37:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:37:45] 2026-01-10 14:37:05,539 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384246/log.47962010._002387.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002387.job
[2026-01-10 09:37:45] 2026-01-10 14:37:05,559 | INFO     | adding to output.list: log.47962010._002387.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a4/81/log.47962010._002387.job.log.tgz.
[2026-01-10 09:37:45] 2026-01-10 14:37:05,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:37:45] 2026-01-10 14:37:05,560 | INFO     | summary of transferred files:
[2026-01-10 09:37:45] 2026-01-10 14:37:05,560 | INFO     |  -- lfn=log.47962010._002387.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:37:45] 2026-01-10 14:37:05,561 | INFO     | stage-out finished correctly
[2026-01-10 09:37:45] 2026-01-10 14:37:05,769 | INFO     | time since job start (4489s) is within the limit (349056.0s)
[2026-01-10 09:37:45] 2026-01-10 14:37:06,797 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:37:45] 2026-01-10 14:37:07,661 | INFO     | job 6965384246 has state=finished
[2026-01-10 09:37:45] 2026-01-10 14:37:07,661 | INFO     | preparing for final server update for job 6965384246 in state='finished'
[2026-01-10 09:37:45] 2026-01-10 14:37:07,662 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:37:45] 2026-01-10 14:37:07,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:37:45] 2026-01-10 14:37:07,662 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:37:45] 2026-01-10 14:37:07,662 | INFO     | job 6965384246 has finished - writing final server update
[2026-01-10 09:37:45] 2026-01-10 14:37:07,663 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:37:45] 2026-01-10 14:37:07,663 | INFO     | executing command: lscpu
[2026-01-10 09:37:45] 2026-01-10 14:37:07,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:37:45] 2026-01-10 14:37:07,775 | INFO     | time since job start (4491s) is within the limit (349056.0s)
[2026-01-10 09:37:45] 2026-01-10 14:37:09,780 | INFO     | time since job start (4493s) is within the limit (349056.0s)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,275 | WARNING  | process 19916 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:37:45] 2026-01-10 14:37:11,275 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384246/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,276 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384246/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,277 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 09:37:45] 2026-01-10 14:37:11,277 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 09:37:45] 2026-01-10 14:37:11,277 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3202225 B
[2026-01-10 09:37:45] 2026-01-10 14:37:11,277 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 162094 B
[2026-01-10 09:37:45] 2026-01-10 14:37:11,278 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13297 B
[2026-01-10 09:37:45] 2026-01-10 14:37:11,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:37:45] 2026-01-10 14:37:11,785 | INFO     | time since job start (4495s) is within the limit (349056.0s)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,969 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:37:45] 2026-01-10 14:37:11,978 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1695.7916666666667
[2026-01-10 09:37:45] 2026-01-10 14:37:11,982 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384246/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,982 | INFO     | extracted standard info from prmon json
[2026-01-10 09:37:45] 2026-01-10 14:37:11,982 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:37:45] 2026-01-10 14:37:11,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:37:45] 2026-01-10 14:37:11,985 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:37:45] 2026-01-10 14:37:11,985 | INFO     | sufficient remaining disk space (28401729536 B)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,986 | INFO     | sum of square deviations: 93227780.74626863
[2026-01-10 09:37:45] 2026-01-10 14:37:11,986 | INFO     | sum of deviations: -2630229815.850746
[2026-01-10 09:37:45] 2026-01-10 14:37:11,986 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,987 | INFO     | mean x: 1768053681.4925373
[2026-01-10 09:37:45] 2026-01-10 14:37:11,987 | INFO     | mean y: 2514860.2985074627
[2026-01-10 09:37:45] 2026-01-10 14:37:11,987 | INFO     | intersect: 49884507887.065674
[2026-01-10 09:37:45] 2026-01-10 14:37:11,988 | INFO     | chi2: 0.42365701874854295
[2026-01-10 09:37:45] 2026-01-10 14:37:11,988 | INFO     | current memory leak: -28.21 B/s (using 67 data points, chi2=0.42)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,988 | INFO     | could have reported an average CPU frequency of 2075 MHz (6 samples)
[2026-01-10 09:37:45] 2026-01-10 14:37:11,989 | INFO     | ..............................
[2026-01-10 09:37:45] 2026-01-10 14:37:11,989 | INFO     | . Timing measurements:
[2026-01-10 09:37:45] 2026-01-10 14:37:11,989 | INFO     | . get job = 0 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,989 | INFO     | . initial setup = 2 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | . payload setup = 6 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | . stage-in = 0 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | . payload execution = 4463 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | . stage-out = 0 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | . log creation = 0 s
[2026-01-10 09:37:45] 2026-01-10 14:37:11,990 | INFO     | ..............................
[2026-01-10 09:37:45] 2026-01-10 14:37:12,079 | INFO     | 
[2026-01-10 09:37:45] 2026-01-10 14:37:12,079 | INFO     | job summary report
[2026-01-10 09:37:45] 2026-01-10 14:37:12,079 | INFO     | --------------------------------------------------
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | PanDA job id: 6965384246
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | task id: 47962010
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | errors: (none)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | pilot state: finished 
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | transexitcode: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | exeerrorcode: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:12,080 | INFO     | exeerrordiag: 
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | exitcode: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | exitmsg: OK
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | cpuconsumptiontime: 31297 s
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | nevents: 50
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | neventsw: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | pid: 19916
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | pgrp: 19916
[2026-01-10 09:37:45] 2026-01-10 14:37:12,081 | INFO     | corecount: 8
[2026-01-10 09:37:45] 2026-01-10 14:37:12,082 | INFO     | event service: False
[2026-01-10 09:37:45] 2026-01-10 14:37:12,082 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 4473: 2311878, 4474: 2320872, 4475: 2320928, 4480: 2321302}
[2026-01-10 09:37:45] 2026-01-10 14:37:12,082 | INFO     | --------------------------------------------------
[2026-01-10 09:37:45] 2026-01-10 14:37:12,082 | INFO     | 
[2026-01-10 09:37:45] 2026-01-10 14:37:12,082 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:37:45] 2026-01-10 14:37:12,087 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6965384246: 6696003 B (within 4404019200 B limit)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,088 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6965384246/HITS.47962010._002387.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,088 | INFO     | total size of present files: 0 B (workdir size: 6696003 B)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,088 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6965384246/HITS.47962010._002387.pool.root.1 since it does not exist
[2026-01-10 09:37:45] 2026-01-10 14:37:12,102 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,102 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,103 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,103 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,105 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:37:45] 2026-01-10 14:37:12,106 | INFO     | job 6965384246 has completed (purged errors)
[2026-01-10 09:37:45] 2026-01-10 14:37:12,106 | INFO     | overall cleanup function is called
[2026-01-10 09:37:45] 2026-01-10 14:37:12,202 | INFO     | number of running child processes to parent process 19916: 1
[2026-01-10 09:37:45] 2026-01-10 14:37:12,202 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:37:45] 2026-01-10 14:37:12,202 | INFO     | aborting job monitoring since job object (job id=6965384246) has expired
[2026-01-10 09:37:45] 2026-01-10 14:37:13,124 | INFO     | --- collectZombieJob: --- 10, [19916]
[2026-01-10 09:37:45] 2026-01-10 14:37:13,124 | INFO     | zombie collector waiting for pid 19916
[2026-01-10 09:37:45] 2026-01-10 14:37:13,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:37:45] 2026-01-10 14:37:13,124 | INFO     | collected zombie processes
[2026-01-10 09:37:45] 2026-01-10 14:37:13,124 | INFO     | will attempt to kill all subprocesses of pid=19916
[2026-01-10 09:37:45] 2026-01-10 14:37:13,227 | INFO     | process IDs to be killed: [19916] (in reverse order)
[2026-01-10 09:37:45] 2026-01-10 14:37:13,260 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-10 09:37:45] 2026-01-10 14:37:13,272 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:37:45] 2026-01-10 14:37:13,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:37:45] 2026-01-10 14:37:13,277 | INFO     | did not find any defunct processes belonging to 19916
[2026-01-10 09:37:45] 2026-01-10 14:37:13,280 | INFO     | did not find any defunct processes belonging to 19916
[2026-01-10 09:37:45] 2026-01-10 14:37:13,280 | INFO     | ready for new job
[2026-01-10 09:37:45] 2026-01-10 14:37:13,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:37:45] 2026-01-10 14:37:13,281 | INFO     | ***************************************
[2026-01-10 09:37:45] 2026-01-10 14:37:13,282 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:37:45] 2026-01-10 14:37:13,282 | INFO     | ***************************************
[2026-01-10 09:37:45] 2026-01-10 14:37:13,282 | INFO     | 
[2026-01-10 09:37:45] 2026-01-10 14:37:13,283 | INFO     | architecture information:
[2026-01-10 09:37:45] 2026-01-10 14:37:13,283 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:37:45] 2026-01-10 14:37:13,296 | INFO     | cat /etc/os-release:
[2026-01-10 09:37:45] NAME="CentOS Linux"
[2026-01-10 09:37:45] VERSION="7 (Core)"
[2026-01-10 09:37:45] ID="centos"
[2026-01-10 09:37:45] ID_LIKE="rhel fedora"
[2026-01-10 09:37:45] VERSION_ID="7"
[2026-01-10 09:37:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:37:45] ANSI_COLOR="0;31"
[2026-01-10 09:37:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:37:45] HOME_URL="https://www.centos.org/"
[2026-01-10 09:37:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:37:45] 
[2026-01-10 09:37:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:37:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:37:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:37:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:37:45] 
[2026-01-10 09:37:45] 2026-01-10 14:37:13,296 | INFO     | ***************************************
[2026-01-10 09:37:45] 2026-01-10 14:37:13,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:37:45] 2026-01-10 14:37:13,816 | INFO     | sufficient remaining disk space (28409069568 B)
[2026-01-10 09:37:45] 2026-01-10 14:37:13,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:37:45] 2026-01-10 14:37:13,817 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:37:45] 2026-01-10 14:37:13,817 | INFO     | update_server=False
[2026-01-10 09:37:45] 2026-01-10 14:37:13,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:37:45] 2026-01-10 14:37:13,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:37:45] 2026-01-10 14:37:13,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:37:45] 2026-01-10 14:37:13,818 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:37:45] 2026-01-10 14:37:13,818 | INFO     | aborting loop
[2026-01-10 09:37:45] 2026-01-10 14:37:13,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:37:45] 2026-01-10 14:37:14,139 | INFO     | all job control threads have been joined
[2026-01-10 09:37:45] 2026-01-10 14:37:14,222 | INFO     | all payload control threads have been joined
[2026-01-10 09:37:45] 2026-01-10 14:37:14,433 | INFO     | all data control threads have been joined
[2026-01-10 09:37:45] 2026-01-10 14:37:14,822 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:14,823 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:14,824 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,145 | INFO     | [job] control thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,198 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,228 | INFO     | [payload] control thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,438 | INFO     | [data] control thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,463 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,577 | INFO     | [job] validate thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:15,824 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:16,031 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:16,092 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:16,099 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:16,280 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:17,825 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:23,172 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:37:45] 2026-01-10 14:37:23,842 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:37:45] 2026-01-10 14:37:24,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:37:45] 2026-01-10 14:37:25,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050554746688)>', '<ExcThread(monitor, started 140049815430912)>']
[2026-01-10 09:37:45] 2026-01-10 14:37:30,793 | INFO     | all workflow threads have been joined
[2026-01-10 09:37:45] 2026-01-10 14:37:30,793 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:37:45] 2026-01-10 14:37:30,793 | INFO     | traces error code: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:30,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:37:45] 2026-01-10 14:37:44,984 | INFO     | PID=28006 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:37:45] 2026-01-10 14:37:45,006 | INFO     | .. there are 2 such processes running
[2026-01-10 09:37:45] 2026-01-10 14:37:45,007 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:37:45] 2026-01-10 14:37:45,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:37:45] 2026-01-10 14:37:45,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:37:45] 2026-01-10 14:37:45,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:37:45] 2026-01-10 14:37:45,008 | INFO     | [monitor] control thread has ended
[2026-01-10 09:37:45] 2026-01-10 14:37:45,094 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:37:45] 2026-01-10 14:37:45,098 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:37:45] 2026-01-10 14:37:45,102 [wrapper] pilotpid: 28006
[2026-01-10 09:37:45] 2026-01-10 14:37:45,105 [wrapper] Pilot exit status: 0
[2026-01-10 09:37:45] 2026-01-10 14:37:45,118 [wrapper] pandaids: 6965384246
[2026-01-10 09:37:45] 2026-01-10 14:37:45,153 [wrapper] cleanup supervisor_pilot  7568 28007
[2026-01-10 09:37:45] 2026-01-10 14:37:45,156 [wrapper] Test setup, not cleaning
[2026-01-10 09:37:45] 2026-01-10 14:37:45,159 [wrapper] apfmon messages muted
[2026-01-10 09:37:45] 2026-01-10 14:37:45,163 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:37:45] 2026-01-10 14:37:45,166 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:37:45]  *** Error codes and diagnostics ***
[2026-01-10 09:37:45]     "exeErrorCode": 0,
[2026-01-10 09:37:45]     "exeErrorDiag": "",
[2026-01-10 09:37:45]     "pilotErrorCode": 0,
[2026-01-10 09:37:45]     "pilotErrorDiag": "",
[2026-01-10 09:37:45]  *** Listing of results directory ***
[2026-01-10 09:37:45] total 436276
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:37:45] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:37:45] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas 393996253 Jan 10 08:22 EVNT.47962006._000098.pool.root.1
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:37:45] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:22 shared
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas    592616 Jan 10 08:22 input.tar.gz
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:22 boinc_lockfile
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:22 pandaJob.out
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas        57 Jan 10 08:22 setup.sh.local
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:37:45] drwx------ 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:27 boinc_task_state.xml
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas      5949 Jan 10 09:29 init_data.xml
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas  45063105 Jan 10 09:36 HITS.47962010._002387.pool.root.1
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas      1053 Jan 10 09:37 memory_monitor_summary.json
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas   1210632 Jan 10 09:37 log.47962010._002387.job.log.tgz.1
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas      8608 Jan 10 09:37 heartbeat.json
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:37 wrapper_checkpoint.txt
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas        95 Jan 10 09:37 pilot_heartbeat.json
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas       820 Jan 10 09:37 pilotlog.txt
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas    676019 Jan 10 09:37 log.47962010._002387.job.log.1
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:37 boinc_mmap_file
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas       353 Jan 10 09:37 output.list
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:37 runtime_log
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas   1904640 Jan 10 09:37 result.tar.gz
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas      9337 Jan 10 09:37 runtime_log.err
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas       657 Jan 10 09:37 GeFLDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFahKDmbpPYEm.diag
[2026-01-10 09:37:45] -rw-r--r-- 1 boincer umatlas     22703 Jan 10 09:37 stderr.txt
[2026-01-10 09:37:45] HITS file was successfully produced:
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas 45063105 Jan 10 09:36 shared/HITS.pool.root.1
[2026-01-10 09:37:45]  *** Contents of shared directory: ***
[2026-01-10 09:37:45] total 431232
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas 393996253 Jan 10 08:22 ATLAS.root_0
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:37:45] -rw-r--r-- 2 boincer umatlas    592616 Jan 10 08:22 input.tar.gz
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas  45063105 Jan 10 09:36 HITS.pool.root.1
[2026-01-10 09:37:45] -rw------- 1 boincer umatlas   1904640 Jan 10 09:37 result.tar.gz
09:37:46 (20207): run_atlas exited; CPU time 31255.450710
09:37:46 (20207): called boinc_finish(0)

</stderr_txt>
]]>

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