Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:59 (1797479): wrapper (7.7.26015): starting
08:30:59 (1797479): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:30:59] Arguments: --nthreads 8
[2026-01-10 08:30:59] Threads: 8
[2026-01-10 08:30:59] Checking for CVMFS
[2026-01-10 08:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:30:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:30:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:31:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:31:00] 2.13.3.0 11416 94866 233824 154981 2 199 23076282 32935937 16721 16776704 0 618411559 99.538 747996456 37322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:31:00] CVMFS is ok
[2026-01-10 08:31:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:31:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:31:00] Further information can be found at the LHC@home message board.
[2026-01-10 08:31:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:31:00] Checking for apptainer binary...
[2026-01-10 08:31:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:31:00] Running /usr/bin/apptainer --version
[2026-01-10 08:31:00] apptainer version 1.4.5-2.el9
[2026-01-10 08:31:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:31:00] c7-2-16.aglt2.org
[2026-01-10 08:31:00] apptainer works
[2026-01-10 08:31:01] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:31:01] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:31:01] Starting ATLAS job with PandaID=6965384375
[2026-01-10 08:31:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:43:57]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:43:57] 2026-01-10 14:42:56,877 | INFO     | preparing for final server update for job 6965384375 in state='finished'
[2026-01-10 09:43:57] 2026-01-10 14:42:56,878 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:43:57] 2026-01-10 14:42:56,878 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:43:57] 2026-01-10 14:42:56,878 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:43:57] 2026-01-10 14:42:56,878 | INFO     | job 6965384375 has finished - writing final server update
[2026-01-10 09:43:57] 2026-01-10 14:42:56,878 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:43:57] 2026-01-10 14:42:56,906 | INFO     | executing command: lscpu
[2026-01-10 09:43:57] 2026-01-10 14:42:57,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:43:57] 2026-01-10 14:42:59,966 | INFO     | PID=1803181 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:43:57] 2026-01-10 14:42:59,966 | INFO     | .. there are 18 such processes running
[2026-01-10 09:43:57] 2026-01-10 14:43:00,884 | WARNING  | process 1813636 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:43:57] 2026-01-10 14:43:00,884 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:57] 2026-01-10 14:43:00,911 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:57] 2026-01-10 14:43:00,912 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 09:43:57] 2026-01-10 14:43:00,912 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 09:43:57] 2026-01-10 14:43:00,975 | INFO     | time since job start (4277s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:02,908 | INFO     | number of running child processes to parent process 1813636: 1
[2026-01-10 09:43:57] 2026-01-10 14:43:02,909 | INFO     | maximum number of monitored processes: 14
[2026-01-10 09:43:57] 2026-01-10 14:43:02,996 | INFO     | time since job start (4279s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:05,003 | INFO     | time since job start (4282s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:05,414 | INFO     | monitor loop #290: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:05,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:07,010 | INFO     | time since job start (4284s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:07,922 | INFO     | monitor loop #291: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:07,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:09,021 | INFO     | time since job start (4286s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:10,427 | INFO     | monitor loop #292: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:10,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:11,055 | INFO     | time since job start (4288s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:12,943 | INFO     | monitor loop #293: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:12,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:13,062 | INFO     | time since job start (4290s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:15,069 | INFO     | time since job start (4292s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:15,463 | INFO     | monitor loop #294: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:15,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:17,076 | INFO     | time since job start (4294s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:17,969 | INFO     | monitor loop #295: job 0:6965384375 is in state 'finished'
[2026-01-10 09:43:57] 2026-01-10 14:43:17,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:57] 2026-01-10 14:43:19,083 | INFO     | time since job start (4296s) is within the limit (349056.0s)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,253 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:43:57] 2026-01-10 14:43:20,270 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3181.6388645833317
[2026-01-10 09:43:57] 2026-01-10 14:43:20,319 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965384375/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,320 | INFO     | extracted standard info from prmon json
[2026-01-10 09:43:57] 2026-01-10 14:43:20,320 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:43:57] 2026-01-10 14:43:20,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:43:57] 2026-01-10 14:43:20,321 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:43:57] 2026-01-10 14:43:20,321 | INFO     | sum of square deviations: 73947221.09677407
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | sum of deviations: 35159947913.870964
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | mean x: 1768054166.580645
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | mean y: 2042684.7258064516
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | intersect: -840660952947.3026
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | chi2: 6.693432176334593
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | current memory leak: 475.47 B/s (using 62 data points, chi2=6.69)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | could have reported an average CPU frequency of 3220 MHz (6 samples)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | ..............................
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | . Timing measurements:
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | . get job = 0 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,322 | INFO     | . initial setup = 3 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,323 | INFO     | . payload setup = 34 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,323 | INFO     | . stage-in = 0 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,323 | INFO     | . payload execution = 4184 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,323 | INFO     | . stage-out = 2 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,323 | INFO     | . log creation = 0 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,353 | INFO     | ..............................
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | 
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | job summary report
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | --------------------------------------------------
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | PanDA job id: 6965384375
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | task id: 47962010
[2026-01-10 09:43:57] 2026-01-10 14:43:20,690 | INFO     | errors: (none)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | pilot state: finished 
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | transexitcode: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | exeerrorcode: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | exeerrordiag: 
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | exitcode: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | exitmsg: OK
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | cpuconsumptiontime: 11454 s
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | nevents: 50
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | neventsw: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | pid: 1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | pgrp: 1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:20,691 | INFO     | corecount: 8
[2026-01-10 09:43:57] 2026-01-10 14:43:20,692 | INFO     | event service: False
[2026-01-10 09:43:57] 2026-01-10 14:43:20,692 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284426, 3: 2284653, 4: 2284653, 15: 2284681, 21: 2285099, 25: 2285127, 4222: 2311926, 4225: 2320976, 4249: 2321166}
[2026-01-10 09:43:57] 2026-01-10 14:43:20,692 | INFO     | --------------------------------------------------
[2026-01-10 09:43:57] 2026-01-10 14:43:20,692 | INFO     | 
[2026-01-10 09:43:57] 2026-01-10 14:43:20,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 09:43:57] 2026-01-10 14:43:20,830 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,831 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,833 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,833 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:43:57] 2026-01-10 14:43:20,833 | INFO     | job 6965384375 has completed (purged errors)
[2026-01-10 09:43:57] 2026-01-10 14:43:20,833 | INFO     | overall cleanup function is called
[2026-01-10 09:43:57] 2026-01-10 14:43:21,921 | INFO     | --- collectZombieJob: --- 10, [1813636]
[2026-01-10 09:43:57] 2026-01-10 14:43:21,921 | INFO     | zombie collector waiting for pid 1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:21,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:43:57] 2026-01-10 14:43:21,922 | INFO     | collected zombie processes
[2026-01-10 09:43:57] 2026-01-10 14:43:21,922 | INFO     | will attempt to kill all subprocesses of pid=1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:23,327 | INFO     | process IDs to be killed: [1813636] (in reverse order)
[2026-01-10 09:43:57] 2026-01-10 14:43:23,647 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:43:57] 2026-01-10 14:43:23,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:43:57] 2026-01-10 14:43:23,784 | INFO     | did not find any defunct processes belonging to 1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:23,913 | INFO     | did not find any defunct processes belonging to 1813636
[2026-01-10 09:43:57] 2026-01-10 14:43:23,913 | INFO     | ready for new job
[2026-01-10 09:43:57] 2026-01-10 14:43:23,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:43:57] 2026-01-10 14:43:23,915 | INFO     | ***************************************
[2026-01-10 09:43:57] 2026-01-10 14:43:23,916 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:43:57] 2026-01-10 14:43:23,916 | INFO     | ***************************************
[2026-01-10 09:43:57] 2026-01-10 14:43:23,916 | INFO     | 
[2026-01-10 09:43:57] 2026-01-10 14:43:23,955 | INFO     | architecture information:
[2026-01-10 09:43:57] 2026-01-10 14:43:23,963 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:43:57] 2026-01-10 14:43:24,077 | INFO     | cat /etc/os-release:
[2026-01-10 09:43:57] NAME="CentOS Linux"
[2026-01-10 09:43:57] VERSION="7 (Core)"
[2026-01-10 09:43:57] ID="centos"
[2026-01-10 09:43:57] ID_LIKE="rhel fedora"
[2026-01-10 09:43:57] VERSION_ID="7"
[2026-01-10 09:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:43:57] ANSI_COLOR="0;31"
[2026-01-10 09:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:43:57] HOME_URL="https://www.centos.org/"
[2026-01-10 09:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:43:57] 
[2026-01-10 09:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:43:57] 
[2026-01-10 09:43:57] 2026-01-10 14:43:24,078 | INFO     | ***************************************
[2026-01-10 09:43:57] 2026-01-10 14:43:24,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 09:43:57] 2026-01-10 14:43:24,676 | INFO     | sufficient remaining disk space (74708942848 B)
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | INFO     | update_server=False
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:57] 2026-01-10 14:43:24,677 | INFO     | aborting loop
[2026-01-10 09:43:57] 2026-01-10 14:43:24,843 | INFO     | all data control threads have been joined
[2026-01-10 09:43:57] 2026-01-10 14:43:24,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:43:57] 2026-01-10 14:43:25,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:43:57] 2026-01-10 14:43:25,683 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:25,684 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:25,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:57] 2026-01-10 14:43:25,849 | INFO     | [data] control thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:25,870 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:25,888 | INFO     | all payload control threads have been joined
[2026-01-10 09:43:57] 2026-01-10 14:43:26,197 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,269 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,314 | INFO     | all job control threads have been joined
[2026-01-10 09:43:57] 2026-01-10 14:43:26,317 | INFO     | [job] validate thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,387 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,566 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,711 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,872 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:26,894 | INFO     | [payload] control thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:27,146 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:27,320 | INFO     | [job] control thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:29,549 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:35,154 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:43:57] 2026-01-10 14:43:36,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:43:57] 2026-01-10 14:43:49,030 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:43:57] 2026-01-10 14:43:50,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756133148480)>', '<ExcThread(monitor, started 139755274626816)>']
[2026-01-10 09:43:57] 2026-01-10 14:43:54,073 | INFO     | PID=1803181 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:43:57] 2026-01-10 14:43:54,074 | INFO     | .. there are 18 such processes running
[2026-01-10 09:43:57] 2026-01-10 14:43:54,096 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:43:57] 2026-01-10 14:43:54,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:43:57] 2026-01-10 14:43:54,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:43:57] 2026-01-10 14:43:54,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:43:57] 2026-01-10 14:43:54,096 | INFO     | [monitor] control thread has ended
[2026-01-10 09:43:57] 2026-01-10 14:43:55,666 | INFO     | all workflow threads have been joined
[2026-01-10 09:43:57] 2026-01-10 14:43:55,666 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:43:57] 2026-01-10 14:43:55,667 | INFO     | traces error code: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:55,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:43:57] 2026-01-10 14:43:55,843 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:43:57] 2026-01-10 14:43:55,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:43:57] 2026-01-10 14:43:55,925 [wrapper] pilotpid: 1803181
[2026-01-10 09:43:57] 2026-01-10 14:43:55,966 [wrapper] Pilot exit status: 0
[2026-01-10 09:43:57] 2026-01-10 14:43:56,060 [wrapper] pandaids: 6965384375
[2026-01-10 09:43:57] 2026-01-10 14:43:56,837 [wrapper] cleanup supervisor_pilot 2067670 1803182
[2026-01-10 09:43:57] 2026-01-10 14:43:56,871 [wrapper] Test setup, not cleaning
[2026-01-10 09:43:57] 2026-01-10 14:43:56,915 [wrapper] apfmon messages muted
[2026-01-10 09:43:57] 2026-01-10 14:43:56,948 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:43:57] 2026-01-10 14:43:56,989 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:43:57]  *** Error codes and diagnostics ***
[2026-01-10 09:43:57]     "exeErrorCode": 0,
[2026-01-10 09:43:57]     "exeErrorDiag": "",
[2026-01-10 09:43:57]     "pilotErrorCode": 0,
[2026-01-10 09:43:57]     "pilotErrorDiag": "",
[2026-01-10 09:43:57]  *** Listing of results directory ***
[2026-01-10 09:43:57] total 430956
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:43:57] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:43:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:30 run_atlas
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:30 job.xml
[2026-01-10 09:43:57] -rw-r--r--. 2 boincer umatlas 392129520 Jan 10 08:30 EVNT.47962006._000023.pool.root.1
[2026-01-10 09:43:57] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:30 input.tar.gz
[2026-01-10 09:43:57] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:30 start_atlas.sh
[2026-01-10 09:43:57] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:30 shared
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:30 boinc_lockfile
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:31 pandaJob.out
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas        57 Jan 10 08:31 setup.sh.local
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas    989556 Jan 10 08:31 agis_schedconf.cvmfs.json
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:43:57] drwx------. 5 boincer umatlas      4096 Jan 10 08:31 pilot3
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:35 boinc_task_state.xml
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 09:38 init_data.xml
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas  41670784 Jan 10 09:42 HITS.47962010._002511.pool.root.1
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas      1035 Jan 10 09:42 memory_monitor_summary.json
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas   1182931 Jan 10 09:42 log.47962010._002511.job.log.tgz.1
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas        95 Jan 10 09:43 pilot_heartbeat.json
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas      8528 Jan 10 09:43 heartbeat.json
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:43 boinc_mmap_file
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas      4896 Jan 10 09:43 pilotlog.txt
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:43 wrapper_checkpoint.txt
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas    607579 Jan 10 09:43 log.47962010._002511.job.log.1
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas       353 Jan 10 09:43 output.list
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:43 runtime_log
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas   1812480 Jan 10 09:43 result.tar.gz
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 09:43 runtime_log.err
[2026-01-10 09:43:57] -rw-------. 1 boincer umatlas       652 Jan 10 09:43 lynMDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPbhKDmpaomCn.diag
[2026-01-10 09:43:57] -rw-r--r--. 1 boincer umatlas     22480 Jan 10 09:43 stderr.txt
[2026-01-10 09:43:58] HITS file was successfully produced:
[2026-01-10 09:43:58] -rw-------. 1 boincer umatlas 41670784 Jan 10 09:42 shared/HITS.pool.root.1
[2026-01-10 09:43:58]  *** Contents of shared directory: ***
[2026-01-10 09:43:58] total 426004
[2026-01-10 09:43:58] -rw-r--r--. 2 boincer umatlas 392129520 Jan 10 08:30 ATLAS.root_0
[2026-01-10 09:43:58] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:30 input.tar.gz
[2026-01-10 09:43:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:30 start_atlas.sh
[2026-01-10 09:43:58] -rw-------. 1 boincer umatlas  41670784 Jan 10 09:42 HITS.pool.root.1
[2026-01-10 09:43:58] -rw-------. 1 boincer umatlas   1812480 Jan 10 09:43 result.tar.gz
09:43:59 (1797479): run_atlas exited; CPU time 11518.608134
09:43:59 (1797479): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN