Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:03 (2613450): wrapper (7.7.26015): starting
08:22:03 (2613450): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:22:03] Arguments: --nthreads 9
[2026-01-10 08:22:03] Threads: 9
[2026-01-10 08:22:03] Checking for CVMFS
[2026-01-10 08:22:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:22:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:22:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:22:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:22:04] 2.13.3.0 12388 94857 214384 154981 0 97 23687097 32935936 16210 16776704 0 416076806 99.472 554522219 38093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:22:04] CVMFS is ok
[2026-01-10 08:22:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:22:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:22:04] Further information can be found at the LHC@home message board.
[2026-01-10 08:22:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:22:04] Checking for apptainer binary...
[2026-01-10 08:22:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:22:04] Running /usr/bin/apptainer --version
[2026-01-10 08:22:04] apptainer version 1.4.5-2.el9
[2026-01-10 08:22:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:22:04] c7-4-31.aglt2.org
[2026-01-10 08:22:04] apptainer works
[2026-01-10 08:22:04] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:22:04] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:22:04] Starting ATLAS job with PandaID=6965384477
[2026-01-10 08:22:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:43:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:43:48] 2026-01-10 14:42:58,657 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384477/log.47962010._002613.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002613.job
[2026-01-10 09:43:48] 2026-01-10 14:42:58,686 | INFO     | adding to output.list: log.47962010._002613.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/73/4d/log.47962010._002613.job.log.tgz.
[2026-01-10 09:43:48] 2026-01-10 14:42:58,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:43:48] 2026-01-10 14:42:58,686 | INFO     | summary of transferred files:
[2026-01-10 09:43:48] 2026-01-10 14:42:58,686 | INFO     |  -- lfn=log.47962010._002613.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:43:48] 2026-01-10 14:42:58,687 | INFO     | stage-out finished correctly
[2026-01-10 09:43:48] 2026-01-10 14:43:00,625 | WARNING  | process 2640251 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:43:48] 2026-01-10 14:43:00,626 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384477/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:48] 2026-01-10 14:43:00,642 | INFO     | time since job start (4843s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:00,995 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:43:48] 2026-01-10 14:43:01,276 | INFO     | number of running child processes to parent process 2640251: 1
[2026-01-10 09:43:48] 2026-01-10 14:43:01,292 | INFO     | maximum number of monitored processes: 17
[2026-01-10 09:43:48] 2026-01-10 14:43:01,907 | INFO     | job 6965384477 has state=finished
[2026-01-10 09:43:48] 2026-01-10 14:43:01,911 | INFO     | preparing for final server update for job 6965384477 in state='finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:01,911 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:43:48] 2026-01-10 14:43:01,911 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:43:48] 2026-01-10 14:43:01,911 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:43:48] 2026-01-10 14:43:01,911 | INFO     | job 6965384477 has finished - writing final server update
[2026-01-10 09:43:48] 2026-01-10 14:43:01,912 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:43:48] 2026-01-10 14:43:01,912 | INFO     | executing command: lscpu
[2026-01-10 09:43:48] 2026-01-10 14:43:02,086 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:43:48] 2026-01-10 14:43:02,298 | INFO     | PID=2622324 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:43:48] 2026-01-10 14:43:02,298 | INFO     | .. there are 15 such processes running
[2026-01-10 09:43:48] 2026-01-10 14:43:03,299 | INFO     | time since job start (4846s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:03,802 | INFO     | monitor loop #304: job 0:6965384477 is in state 'finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:03,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:48] 2026-01-10 14:43:05,305 | INFO     | time since job start (4848s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:06,307 | INFO     | monitor loop #305: job 0:6965384477 is in state 'finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:06,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:48] 2026-01-10 14:43:07,312 | INFO     | time since job start (4850s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:08,839 | INFO     | monitor loop #306: job 0:6965384477 is in state 'finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:08,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:48] 2026-01-10 14:43:09,322 | INFO     | time since job start (4852s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:11,329 | INFO     | time since job start (4854s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:11,346 | INFO     | monitor loop #307: job 0:6965384477 is in state 'finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:11,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:48] 2026-01-10 14:43:13,338 | INFO     | time since job start (4856s) is within the limit (349056.0s)
[2026-01-10 09:43:48] 2026-01-10 14:43:13,852 | INFO     | monitor loop #308: job 0:6965384477 is in state 'finished'
[2026-01-10 09:43:48] 2026-01-10 14:43:13,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,454 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:43:48] 2026-01-10 14:43:14,460 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3206.0099270833325
[2026-01-10 09:43:48] 2026-01-10 14:43:14,473 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384477/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,473 | INFO     | extracted standard info from prmon json
[2026-01-10 09:43:48] 2026-01-10 14:43:14,474 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:43:48] 2026-01-10 14:43:14,474 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:43:48] 2026-01-10 14:43:14,476 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:43:48] 2026-01-10 14:43:14,476 | INFO     | sum of square deviations: 115598146.8750001
[2026-01-10 09:43:48] 2026-01-10 14:43:14,476 | INFO     | sum of deviations: -9189390778.208334
[2026-01-10 09:43:48] 2026-01-10 14:43:14,476 | INFO     | mean x: 1768053840.2916667
[2026-01-10 09:43:48] 2026-01-10 14:43:14,477 | INFO     | mean y: 2636581.486111111
[2026-01-10 09:43:48] 2026-01-10 14:43:14,477 | INFO     | intersect: 140552793262.811
[2026-01-10 09:43:48] 2026-01-10 14:43:14,477 | INFO     | chi2: 1.1839689198152707
[2026-01-10 09:43:48] 2026-01-10 14:43:14,477 | INFO     | current memory leak: -79.49 B/s (using 72 data points, chi2=1.18)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,484 | INFO     | could have reported an average CPU frequency of 3175 MHz (6 samples)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | ..............................
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . Timing measurements:
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . get job = 0 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . initial setup = 2 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . payload setup = 7 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . stage-in = 0 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . payload execution = 4810 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . stage-out = 1 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | . log creation = 0 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,485 | INFO     | ..............................
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | 
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | job summary report
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | --------------------------------------------------
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | PanDA job id: 6965384477
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | task id: 47962010
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | errors: (none)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:43:48] 2026-01-10 14:43:14,658 | INFO     | pilot state: finished 
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | transexitcode: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | exeerrorcode: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | exeerrordiag: 
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | exitcode: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | exitmsg: OK
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | cpuconsumptiontime: 12532 s
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | nevents: 50
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | neventsw: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | pid: 2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | pgrp: 2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | corecount: 9
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | event service: False
[2026-01-10 09:43:48] 2026-01-10 14:43:14,659 | INFO     | sizes: {0: 2284400, 1: 2284599, 6: 2284861, 11: 2284889, 4822: 2311857, 4825: 2320851, 4827: 2321035, 4841: 2321281}
[2026-01-10 09:43:48] 2026-01-10 14:43:14,660 | INFO     | --------------------------------------------------
[2026-01-10 09:43:48] 2026-01-10 14:43:14,660 | INFO     | 
[2026-01-10 09:43:48] 2026-01-10 14:43:14,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,724 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:43:48] 2026-01-10 14:43:14,725 | INFO     | job 6965384477 has completed (purged errors)
[2026-01-10 09:43:48] 2026-01-10 14:43:14,725 | INFO     | overall cleanup function is called
[2026-01-10 09:43:48] 2026-01-10 14:43:15,741 | INFO     | --- collectZombieJob: --- 10, [2640251]
[2026-01-10 09:43:48] 2026-01-10 14:43:15,742 | INFO     | zombie collector waiting for pid 2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:15,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:43:48] 2026-01-10 14:43:15,742 | INFO     | collected zombie processes
[2026-01-10 09:43:48] 2026-01-10 14:43:15,742 | INFO     | will attempt to kill all subprocesses of pid=2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:16,213 | INFO     | process IDs to be killed: [2640251] (in reverse order)
[2026-01-10 09:43:48] 2026-01-10 14:43:16,420 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:43:48] 2026-01-10 14:43:16,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:43:48] 2026-01-10 14:43:16,436 | INFO     | did not find any defunct processes belonging to 2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:16,452 | INFO     | did not find any defunct processes belonging to 2640251
[2026-01-10 09:43:48] 2026-01-10 14:43:16,452 | INFO     | ready for new job
[2026-01-10 09:43:48] 2026-01-10 14:43:16,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:43:48] 2026-01-10 14:43:16,455 | INFO     | ***************************************
[2026-01-10 09:43:48] 2026-01-10 14:43:16,455 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:43:48] 2026-01-10 14:43:16,455 | INFO     | ***************************************
[2026-01-10 09:43:48] 2026-01-10 14:43:16,455 | INFO     | 
[2026-01-10 09:43:48] 2026-01-10 14:43:16,461 | INFO     | architecture information:
[2026-01-10 09:43:48] 2026-01-10 14:43:16,484 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:43:48] 2026-01-10 14:43:16,534 | INFO     | cat /etc/os-release:
[2026-01-10 09:43:48] NAME="CentOS Linux"
[2026-01-10 09:43:48] VERSION="7 (Core)"
[2026-01-10 09:43:48] ID="centos"
[2026-01-10 09:43:48] ID_LIKE="rhel fedora"
[2026-01-10 09:43:48] VERSION_ID="7"
[2026-01-10 09:43:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:43:48] ANSI_COLOR="0;31"
[2026-01-10 09:43:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:43:48] HOME_URL="https://www.centos.org/"
[2026-01-10 09:43:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:43:48] 
[2026-01-10 09:43:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:43:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:43:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:43:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:43:48] 
[2026-01-10 09:43:48] 2026-01-10 14:43:16,534 | INFO     | ***************************************
[2026-01-10 09:43:48] 2026-01-10 14:43:17,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | INFO     | sufficient remaining disk space (74316775424 B)
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | INFO     | update_server=False
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:43:48] 2026-01-10 14:43:17,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:43:48] 2026-01-10 14:43:17,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:43:48] 2026-01-10 14:43:17,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:48] 2026-01-10 14:43:17,364 | INFO     | aborting loop
[2026-01-10 09:43:48] 2026-01-10 14:43:17,944 | INFO     | all data control threads have been joined
[2026-01-10 09:43:48] 2026-01-10 14:43:18,075 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,172 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,206 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,232 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,264 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,370 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,425 | INFO     | all payload control threads have been joined
[2026-01-10 09:43:48] 2026-01-10 14:43:18,430 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,627 | INFO     | all job control threads have been joined
[2026-01-10 09:43:48] 2026-01-10 14:43:18,923 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:18,950 | INFO     | [data] control thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:19,076 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:19,098 | INFO     | [job] validate thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:19,431 | INFO     | [payload] control thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:19,633 | INFO     | [job] control thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:19,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:48] 2026-01-10 14:43:20,689 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:21,078 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:43:48] 2026-01-10 14:43:24,991 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:43:48] 2026-01-10 14:43:26,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140493883602752)>', '<ExcThread(monitor, started 140493405021952)>']
[2026-01-10 09:43:48] 2026-01-10 14:43:31,529 | INFO     | all workflow threads have been joined
[2026-01-10 09:43:48] 2026-01-10 14:43:31,530 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:43:48] 2026-01-10 14:43:31,530 | INFO     | traces error code: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:31,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:43:48] 2026-01-10 14:43:47,189 | INFO     | PID=2622324 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | INFO     | .. there are 15 such processes running
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 09:43:48] 2026-01-10 14:43:47,190 | INFO     | [monitor] control thread has ended
[2026-01-10 09:43:48] 2026-01-10 14:43:47,650 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:43:48] 2026-01-10 14:43:47,654 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:43:48] 2026-01-10 14:43:47,657 [wrapper] pilotpid: 2622324
[2026-01-10 09:43:48] 2026-01-10 14:43:47,659 [wrapper] Pilot exit status: 0
[2026-01-10 09:43:48] 2026-01-10 14:43:47,704 [wrapper] pandaids: 6965384477
[2026-01-10 09:43:48] 2026-01-10 14:43:47,871 [wrapper] cleanup supervisor_pilot 2840998 2622327
[2026-01-10 09:43:48] 2026-01-10 14:43:47,874 [wrapper] Test setup, not cleaning
[2026-01-10 09:43:48] 2026-01-10 14:43:47,882 [wrapper] apfmon messages muted
[2026-01-10 09:43:48] 2026-01-10 14:43:47,891 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:43:48] 2026-01-10 14:43:47,964 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:43:48]  *** Error codes and diagnostics ***
[2026-01-10 09:43:48]     "exeErrorCode": 0,
[2026-01-10 09:43:48]     "exeErrorDiag": "",
[2026-01-10 09:43:48]     "pilotErrorCode": 0,
[2026-01-10 09:43:48]     "pilotErrorDiag": "",
[2026-01-10 09:43:48]  *** Listing of results directory ***
[2026-01-10 09:43:48] total 436812
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:43:48] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:43:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:22 run_atlas
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:22 job.xml
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:22 EVNT.47962006._000120.pool.root.1
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:43:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:22 shared
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:22 input.tar.gz
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:22 boinc_lockfile
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas      2891 Jan 10 08:22 pandaJob.out
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas        57 Jan 10 08:22 setup.sh.local
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:43:48] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:29 boinc_task_state.xml
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 09:39 init_data.xml
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas  46414473 Jan 10 09:42 HITS.47962010._002613.pool.root.1
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas        95 Jan 10 09:42 pilot_heartbeat.json
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas      1031 Jan 10 09:42 memory_monitor_summary.json
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas   1288544 Jan 10 09:42 log.47962010._002613.job.log.tgz.1
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas      8533 Jan 10 09:43 heartbeat.json
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:43 boinc_mmap_file
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:43 wrapper_checkpoint.txt
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas       893 Jan 10 09:43 pilotlog.txt
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas    665043 Jan 10 09:43 log.47962010._002613.job.log.1
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas       353 Jan 10 09:43 output.list
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:43 runtime_log
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas   1976320 Jan 10 09:43 result.tar.gz
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 09:43 runtime_log.err
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas       652 Jan 10 09:43 p9HMDmSyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8ZhKDmzjxGwm.diag
[2026-01-10 09:43:48] -rw-r--r--. 1 boincer umatlas     22579 Jan 10 09:43 stderr.txt
[2026-01-10 09:43:48] HITS file was successfully produced:
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas 46414473 Jan 10 09:42 shared/HITS.pool.root.1
[2026-01-10 09:43:48]  *** Contents of shared directory: ***
[2026-01-10 09:43:48] total 431704
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas 393052646 Jan 10 08:22 ATLAS.root_0
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:43:48] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:22 input.tar.gz
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas  46414473 Jan 10 09:42 HITS.pool.root.1
[2026-01-10 09:43:48] -rw-------. 1 boincer umatlas   1976320 Jan 10 09:43 result.tar.gz
09:43:49 (2613450): run_atlas exited; CPU time 12573.156054
09:43:49 (2613450): called boinc_finish(0)

</stderr_txt>
]]>

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