Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:06 (680733): wrapper (7.7.26015): starting
08:23:06 (680733): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:23:06] Arguments: --nthreads 8
[2026-01-10 08:23:06] Threads: 8
[2026-01-10 08:23:06] Checking for CVMFS
[2026-01-10 08:23:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:23:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:23:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:23:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:23:06] 2.13.3.0 9428 93209 323288 154981 0 280 15739971 18491392 11789 16776704 0 423473096 99.363 670005048 33250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:23:06] CVMFS is ok
[2026-01-10 08:23:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:23:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:23:06] Further information can be found at the LHC@home message board.
[2026-01-10 08:23:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:23:06] Checking for apptainer binary...
[2026-01-10 08:23:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:23:06] Running /usr/bin/apptainer --version
[2026-01-10 08:23:06] apptainer version 1.4.5-2.el9
[2026-01-10 08:23:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:23:06] c-8-38.aglt2.org
[2026-01-10 08:23:06] apptainer works
[2026-01-10 08:23:06] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:23:06] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:23:06] Starting ATLAS job with PandaID=6965384346
[2026-01-10 08:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:30:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:30:29]  is_altstaged=None
[2026-01-10 09:30:29]  is_tar=False
[2026-01-10 09:30:29]  lfn=log.47962010._002482.job.log.tgz.1
[2026-01-10 09:30:29]  mtime=0
[2026-01-10 09:30:29]  protocol_id=None
[2026-01-10 09:30:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:30:29]  replicas=None
[2026-01-10 09:30:29]  scope=mc16_13TeV
[2026-01-10 09:30:29]  status=None
[2026-01-10 09:30:29]  status_code=0
[2026-01-10 09:30:29]  storage_token=
[2026-01-10 09:30:29]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965384346/log.47962010._002482.job.log.tgz.1
[2026-01-10 09:30:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5d/ff/log.47962010._002482.job.log.tgz.1
[2026-01-10 09:30:29]  workdir=None
[2026-01-10 09:30:29] ]
[2026-01-10 09:30:29] 2026-01-10 14:29:16,110 | INFO     | transferring file log.47962010._002482.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965384346/log.47962010._002482.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:30:29] 2026-01-10 14:29:16,111 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384346/log.47962010._002482.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002482.job
[2026-01-10 09:30:29] 2026-01-10 14:29:16,131 | INFO     | adding to output.list: log.47962010._002482.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5d/ff/log.47962010._002482.job.log.tgz.
[2026-01-10 09:30:29] 2026-01-10 14:29:16,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:30:29] 2026-01-10 14:29:16,132 | INFO     | summary of transferred files:
[2026-01-10 09:30:29] 2026-01-10 14:29:16,133 | INFO     |  -- lfn=log.47962010._002482.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:30:29] 2026-01-10 14:29:16,133 | INFO     | stage-out finished correctly
[2026-01-10 09:30:29] 2026-01-10 14:29:17,421 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:30:29] 2026-01-10 14:29:17,850 | INFO     | time since job start (3960s) is within the limit (349056.0s)
[2026-01-10 09:30:29] 2026-01-10 14:29:18,068 | INFO     | monitor loop #276: job 0:6965384346 is in state 'finished'
[2026-01-10 09:30:29] 2026-01-10 14:29:18,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:30:29] 2026-01-10 14:29:18,106 | INFO     | job 6965384346 has state=finished
[2026-01-10 09:30:29] 2026-01-10 14:29:18,106 | INFO     | preparing for final server update for job 6965384346 in state='finished'
[2026-01-10 09:30:29] 2026-01-10 14:29:18,107 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:30:29] 2026-01-10 14:29:18,107 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:30:29] 2026-01-10 14:29:18,107 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:30:29] 2026-01-10 14:29:18,107 | INFO     | job 6965384346 has finished - writing final server update
[2026-01-10 09:30:29] 2026-01-10 14:29:18,108 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:30:29] 2026-01-10 14:29:18,109 | INFO     | executing command: lscpu
[2026-01-10 09:30:29] 2026-01-10 14:29:18,147 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:30:29] 2026-01-10 14:29:19,856 | INFO     | time since job start (3962s) is within the limit (349056.0s)
[2026-01-10 09:30:29] 2026-01-10 14:29:20,571 | INFO     | monitor loop #277: job 0:6965384346 is in state 'finished'
[2026-01-10 09:30:29] 2026-01-10 14:29:20,571 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:30:29] 2026-01-10 14:29:21,862 | INFO     | time since job start (3964s) is within the limit (349056.0s)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,135 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:30:29] 2026-01-10 14:29:22,141 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2660.365
[2026-01-10 09:30:29] 2026-01-10 14:29:22,147 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384346/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,148 | INFO     | extracted standard info from prmon json
[2026-01-10 09:30:29] 2026-01-10 14:29:22,148 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:30:29] 2026-01-10 14:29:22,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:30:29] 2026-01-10 14:29:22,151 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:30:29] 2026-01-10 14:29:22,151 | INFO     | sum of square deviations: 60300882.275862075
[2026-01-10 09:30:29] 2026-01-10 14:29:22,151 | INFO     | sum of deviations: 1997336162.3793066
[2026-01-10 09:30:29] 2026-01-10 14:29:22,151 | INFO     | mean x: 1768053468.8275862
[2026-01-10 09:30:29] 2026-01-10 14:29:22,152 | INFO     | mean y: 2586492.1379310344
[2026-01-10 09:30:29] 2026-01-10 14:29:22,152 | INFO     | intersect: -58560356486.94182
[2026-01-10 09:30:29] 2026-01-10 14:29:22,152 | INFO     | chi2: 0.24031116028922292
[2026-01-10 09:30:29] 2026-01-10 14:29:22,152 | INFO     | current memory leak: 33.12 B/s (using 58 data points, chi2=0.24)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,152 | INFO     | could have reported an average CPU frequency of 2630 MHz (6 samples)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | ..............................
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . Timing measurements:
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . get job = 0 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . initial setup = 2 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . payload setup = 5 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . stage-in = 0 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . payload execution = 3933 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . stage-out = 0 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | . log creation = 0 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,153 | INFO     | ..............................
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | 
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | job summary report
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | --------------------------------------------------
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | PanDA job id: 6965384346
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | task id: 47962010
[2026-01-10 09:30:29] 2026-01-10 14:29:22,651 | INFO     | errors: (none)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | pilot state: finished 
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | transexitcode: 0
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | exeerrorcode: 0
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | exeerrordiag: 
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | exitcode: 0
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | exitmsg: OK
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | cpuconsumptiontime: 18121 s
[2026-01-10 09:30:29] 2026-01-10 14:29:22,652 | INFO     | nevents: 50
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | neventsw: 0
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | pid: 704758
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | pgrp: 704758
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | corecount: 8
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | event service: False
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 3942: 2311572, 3943: 2320566, 3944: 2320622, 3949: 2320996}
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | --------------------------------------------------
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | 
[2026-01-10 09:30:29] 2026-01-10 14:29:22,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:30:29] 2026-01-10 14:29:22,671 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,674 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:30:29] 2026-01-10 14:29:22,674 | INFO     | job 6965384346 has completed (purged errors)
[2026-01-10 09:30:29] 2026-01-10 14:29:22,674 | INFO     | overall cleanup function is called
[2026-01-10 09:30:29] 2026-01-10 14:29:23,689 | INFO     | --- collectZombieJob: --- 10, [704758]
[2026-01-10 09:30:29] 2026-01-10 14:29:23,689 | INFO     | zombie collector waiting for pid 704758
[2026-01-10 09:30:29] 2026-01-10 14:29:23,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:30:29] 2026-01-10 14:29:23,690 | INFO     | collected zombie processes
[2026-01-10 09:30:29] 2026-01-10 14:29:23,690 | INFO     | will attempt to kill all subprocesses of pid=704758
[2026-01-10 09:30:29] 2026-01-10 14:29:24,061 | INFO     | process IDs to be killed: [704758] (in reverse order)
[2026-01-10 09:30:29] 2026-01-10 14:29:24,158 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:30:29] 2026-01-10 14:29:24,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:30:29] 2026-01-10 14:29:24,175 | INFO     | did not find any defunct processes belonging to 704758
[2026-01-10 09:30:29] 2026-01-10 14:29:24,189 | INFO     | did not find any defunct processes belonging to 704758
[2026-01-10 09:30:29] 2026-01-10 14:29:24,189 | INFO     | ready for new job
[2026-01-10 09:30:29] 2026-01-10 14:29:24,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:30:29] 2026-01-10 14:29:24,191 | INFO     | ***************************************
[2026-01-10 09:30:29] 2026-01-10 14:29:24,192 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:30:29] 2026-01-10 14:29:24,192 | INFO     | ***************************************
[2026-01-10 09:30:29] 2026-01-10 14:29:24,192 | INFO     | 
[2026-01-10 09:30:29] 2026-01-10 14:29:24,194 | INFO     | architecture information:
[2026-01-10 09:30:29] 2026-01-10 14:29:24,195 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:30:29] 2026-01-10 14:29:24,209 | INFO     | cat /etc/os-release:
[2026-01-10 09:30:29] NAME="CentOS Linux"
[2026-01-10 09:30:29] VERSION="7 (Core)"
[2026-01-10 09:30:29] ID="centos"
[2026-01-10 09:30:29] ID_LIKE="rhel fedora"
[2026-01-10 09:30:29] VERSION_ID="7"
[2026-01-10 09:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:30:29] ANSI_COLOR="0;31"
[2026-01-10 09:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:30:29] HOME_URL="https://www.centos.org/"
[2026-01-10 09:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:30:29] 
[2026-01-10 09:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:30:29] 
[2026-01-10 09:30:29] 2026-01-10 14:29:24,209 | INFO     | ***************************************
[2026-01-10 09:30:29] 2026-01-10 14:29:24,713 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:30:29] 2026-01-10 14:29:24,726 | INFO     | sufficient remaining disk space (95588188160 B)
[2026-01-10 09:30:29] 2026-01-10 14:29:24,726 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:30:29] 2026-01-10 14:29:24,726 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:30:29] 2026-01-10 14:29:24,726 | INFO     | update_server=False
[2026-01-10 09:30:29] 2026-01-10 14:29:24,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:30:29] 2026-01-10 14:29:24,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:30:29] 2026-01-10 14:29:24,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:30:29] 2026-01-10 14:29:24,727 | INFO     | aborting loop
[2026-01-10 09:30:29] 2026-01-10 14:29:24,995 | INFO     | all data control threads have been joined
[2026-01-10 09:30:29] 2026-01-10 14:29:25,373 | INFO     | all payload control threads have been joined
[2026-01-10 09:30:29] 2026-01-10 14:29:25,732 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:25,733 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:25,796 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:25,851 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:25,867 | INFO     | all job control threads have been joined
[2026-01-10 09:30:29] 2026-01-10 14:29:25,895 | INFO     | [job] validate thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,000 | INFO     | [data] control thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,374 | INFO     | [payload] control thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,555 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,671 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,733 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,741 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:26,872 | INFO     | [job] control thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:27,198 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:27,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:30:29] 2026-01-10 14:29:28,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:30:29] 2026-01-10 14:29:28,271 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:32,031 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:35,175 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:30:29] 2026-01-10 14:29:36,181 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:30:29] 2026-01-10 14:29:55,482 | INFO     | PID=687065 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 09:30:29] 2026-01-10 14:29:55,483 | INFO     | .. there are 18 such processes running
[2026-01-10 09:30:29] 2026-01-10 14:29:55,483 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:30:29] 2026-01-10 14:29:55,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:30:29] 2026-01-10 14:29:55,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:30:29] 2026-01-10 14:30:24,149 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:30:29] 2026-01-10 14:30:24,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618939393856)>', '<ExcThread(monitor, started 140618235901696)>']
[2026-01-10 09:30:29] 2026-01-10 14:30:24,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:30:29] 2026-01-10 14:30:24,654 | INFO     | [monitor] control thread has ended
[2026-01-10 09:30:29] 2026-01-10 14:30:29,419 | INFO     | all workflow threads have been joined
[2026-01-10 09:30:29] 2026-01-10 14:30:29,419 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:30:29] 2026-01-10 14:30:29,419 | INFO     | traces error code: 0
[2026-01-10 09:30:29] 2026-01-10 14:30:29,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:30:29] 2026-01-10 14:30:29,595 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:30:29] 2026-01-10 14:30:29,598 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:30:29] 2026-01-10 14:30:29,600 [wrapper] pilotpid: 687065
[2026-01-10 09:30:29] 2026-01-10 14:30:29,602 [wrapper] Pilot exit status: 0
[2026-01-10 09:30:29] 2026-01-10 14:30:29,612 [wrapper] pandaids: 6965384346
[2026-01-10 09:30:29] 2026-01-10 14:30:29,685 [wrapper] cleanup supervisor_pilot  867745 687066
[2026-01-10 09:30:29] 2026-01-10 14:30:29,687 [wrapper] Test setup, not cleaning
[2026-01-10 09:30:29] 2026-01-10 14:30:29,690 [wrapper] apfmon messages muted
[2026-01-10 09:30:29] 2026-01-10 14:30:29,692 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:30:29] 2026-01-10 14:30:29,694 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:30:29]  *** Error codes and diagnostics ***
[2026-01-10 09:30:29]     "exeErrorCode": 0,
[2026-01-10 09:30:29]     "exeErrorDiag": "",
[2026-01-10 09:30:29]     "pilotErrorCode": 0,
[2026-01-10 09:30:29]     "pilotErrorDiag": "",
[2026-01-10 09:30:29]  *** Listing of results directory ***
[2026-01-10 09:30:29] total 433964
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:30:29] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:30:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:23 run_atlas
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:23 job.xml
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas 391896450 Jan 10 08:23 EVNT.47962006._000020.pool.root.1
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:30:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:23 shared
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 08:23 input.tar.gz
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:23 boinc_lockfile
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:23 pandaJob.out
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas        57 Jan 10 08:23 setup.sh.local
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas    989556 Jan 10 08:23 agis_schedconf.cvmfs.json
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:30:29] drwx------. 5 boincer umatlas      4096 Jan 10 08:23 pilot3
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:21 boinc_task_state.xml
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas  45004484 Jan 10 09:29 HITS.47962010._002482.pool.root.1
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas      1048 Jan 10 09:29 memory_monitor_summary.json
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas   1190877 Jan 10 09:29 log.47962010._002482.job.log.tgz.1
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas        95 Jan 10 09:29 pilot_heartbeat.json
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas      8572 Jan 10 09:29 heartbeat.json
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas      6660 Jan 10 09:30 init_data.xml
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:30 boinc_mmap_file
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:30 wrapper_checkpoint.txt
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas      4895 Jan 10 09:30 pilotlog.txt
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas    587624 Jan 10 09:30 log.47962010._002482.job.log.1
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas       353 Jan 10 09:30 output.list
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:30 runtime_log
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas   1802240 Jan 10 09:30 result.tar.gz
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas       650 Jan 10 09:30 zeOMDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6ahKDmsOs5Nn.diag
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas      9332 Jan 10 09:30 runtime_log.err
[2026-01-10 09:30:29] -rw-r--r--. 1 boincer umatlas     21532 Jan 10 09:30 stderr.txt
[2026-01-10 09:30:29] HITS file was successfully produced:
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas 45004484 Jan 10 09:29 shared/HITS.pool.root.1
[2026-01-10 09:30:29]  *** Contents of shared directory: ***
[2026-01-10 09:30:29] total 429024
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas 391896450 Jan 10 08:23 ATLAS.root_0
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:23 start_atlas.sh
[2026-01-10 09:30:29] -rw-r--r--. 2 boincer umatlas    592619 Jan 10 08:23 input.tar.gz
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas  45004484 Jan 10 09:29 HITS.pool.root.1
[2026-01-10 09:30:29] -rw-------. 1 boincer umatlas   1802240 Jan 10 09:30 result.tar.gz
09:30:31 (680733): run_atlas exited; CPU time 18186.013945
09:30:31 (680733): called boinc_finish(0)

</stderr_txt>
]]>

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