Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:07 (2273599): wrapper (7.7.26015): starting
17:20:07 (2273599): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 17:20:07] Arguments: --nthreads 12
[2026-01-11 17:20:07] Threads: 12
[2026-01-11 17:20:07] Checking for CVMFS
[2026-01-11 17:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 17:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 17:20:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 17:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 17:20:08] 2.13.3.0 36987 5985 106572 155023 3 98 35867076 46080000 1043 130560 0 9778389 99.995 225056 24887 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 17:20:08] CVMFS is ok
[2026-01-11 17:20:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 17:20:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 17:20:08] Further information can be found at the LHC@home message board.
[2026-01-11 17:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 17:20:08] Checking for apptainer binary...
[2026-01-11 17:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 17:20:08] Running /usr/bin/apptainer --version
[2026-01-11 17:20:08] apptainer version 1.4.5-2.el9
[2026-01-11 17:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 17:20:08] minis01.farm.particle.cz
[2026-01-11 17:20:08] apptainer works
[2026-01-11 17:20:08] Set ATHENA_PROC_NUMBER=12
[2026-01-11 17:20:08] Set ATHENA_CORE_NUMBER=12
[2026-01-11 17:20:08] Starting ATLAS job with PandaID=6965384431
[2026-01-11 17:20:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 17:41:24]  *** The last 200 lines of the pilot log: ***
[2026-01-11 17:41:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 17:41:24]  replicas=None
[2026-01-11 17:41:24]  scope=mc16_13TeV
[2026-01-11 17:41:24]  status=None
[2026-01-11 17:41:24]  status_code=0
[2026-01-11 17:41:24]  storage_token=
[2026-01-11 17:41:24]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6965384431/log.47962010._002567.job.log.tgz.1
[2026-01-11 17:41:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/17/1f/log.47962010._002567.job.log.tgz.1
[2026-01-11 17:41:24]  workdir=None
[2026-01-11 17:41:24] ]
[2026-01-11 17:41:24] 2026-01-11 16:40:40,429 | INFO     | transferring file log.47962010._002567.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6965384431/log.47962010._002567.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 17:41:24] 2026-01-11 16:40:40,429 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6965384431/log.47962010._002567.job.log.tgz.1 /var/lib/boinc/slots/0/log.47962010._002567.job
[2026-01-11 17:41:24] 2026-01-11 16:40:40,446 | INFO     | adding to output.list: log.47962010._002567.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/17/1f/log.47962010._002567.job.log.tgz.
[2026-01-11 17:41:24] 2026-01-11 16:40:40,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 17:41:24] 2026-01-11 16:40:40,447 | INFO     | summary of transferred files:
[2026-01-11 17:41:24] 2026-01-11 16:40:40,447 | INFO     |  -- lfn=log.47962010._002567.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 17:41:24] 2026-01-11 16:40:40,447 | INFO     | stage-out finished correctly
[2026-01-11 17:41:24] 2026-01-11 16:40:41,118 | INFO     | time since job start (1225s) is within the limit (349056.0s)
[2026-01-11 17:41:24] 2026-01-11 16:40:41,494 | INFO     | monitor loop #96: job 0:6965384431 is in state 'finished'
[2026-01-11 17:41:24] 2026-01-11 16:40:41,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:41:24] 2026-01-11 16:40:42,312 | INFO     | PID=2277480 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 17:41:24] 2026-01-11 16:40:42,312 | INFO     | .. there are 2 such processes running
[2026-01-11 17:41:24] 2026-01-11 16:40:43,312 | INFO     | time since job start (1227s) is within the limit (349056.0s)
[2026-01-11 17:41:24] 2026-01-11 16:40:43,377 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 17:41:24] 2026-01-11 16:40:43,998 | INFO     | monitor loop #97: job 0:6965384431 is in state 'finished'
[2026-01-11 17:41:24] 2026-01-11 16:40:43,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:41:24] 2026-01-11 16:40:44,782 | INFO     | job 6965384431 has state=finished
[2026-01-11 17:41:24] 2026-01-11 16:40:44,783 | INFO     | preparing for final server update for job 6965384431 in state='finished'
[2026-01-11 17:41:24] 2026-01-11 16:40:44,783 | INFO     | this job has now completed (state=finished)
[2026-01-11 17:41:24] 2026-01-11 16:40:44,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 17:41:24] 2026-01-11 16:40:44,783 | INFO     | log transfer has been attempted: DONE
[2026-01-11 17:41:24] 2026-01-11 16:40:44,784 | INFO     | job 6965384431 has finished - writing final server update
[2026-01-11 17:41:24] 2026-01-11 16:40:44,784 | INFO     | total number of processed events: 50 (read)
[2026-01-11 17:41:24] 2026-01-11 16:40:44,788 | INFO     | executing command: lscpu
[2026-01-11 17:41:24] 2026-01-11 16:40:44,821 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 17:41:24] 2026-01-11 16:40:45,318 | INFO     | time since job start (1229s) is within the limit (349056.0s)
[2026-01-11 17:41:24] 2026-01-11 16:40:46,500 | INFO     | monitor loop #98: job 0:6965384431 is in state 'finished'
[2026-01-11 17:41:24] 2026-01-11 16:40:46,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 17:41:24] 2026-01-11 16:40:47,323 | INFO     | time since job start (1231s) is within the limit (349056.0s)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,416 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 17:41:24] 2026-01-11 16:40:48,421 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2777.9549062500005
[2026-01-11 17:41:24] 2026-01-11 16:40:48,426 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6965384431/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,426 | INFO     | extracted standard info from prmon json
[2026-01-11 17:41:24] 2026-01-11 16:40:48,427 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 17:41:24] 2026-01-11 16:40:48,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 17:41:24] 2026-01-11 16:40:48,427 | INFO     | fitting pss+swap vs Time
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | sum of square deviations: 676370.3076923075
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | sum of deviations: -184627329.92307693
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | mean x: 1768149111.7692308
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | mean y: 3128445.6923076925
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | intersect: 482650940892.717
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | chi2: 0.08149051782950952
[2026-01-11 17:41:24] 2026-01-11 16:40:48,428 | INFO     | current memory leak: -272.97 B/s (using 13 data points, chi2=0.08)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | ..............................
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . Timing measurements:
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . get job = 0 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . initial setup = 1 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . payload setup = 5 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . stage-in = 0 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . payload execution = 1200 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . stage-out = 0 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | . log creation = 0 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,429 | INFO     | ..............................
[2026-01-11 17:41:24] 2026-01-11 16:40:48,833 | INFO     | 
[2026-01-11 17:41:24] 2026-01-11 16:40:48,833 | INFO     | job summary report
[2026-01-11 17:41:24] 2026-01-11 16:40:48,833 | INFO     | --------------------------------------------------
[2026-01-11 17:41:24] 2026-01-11 16:40:48,833 | INFO     | PanDA job id: 6965384431
[2026-01-11 17:41:24] 2026-01-11 16:40:48,833 | INFO     | task id: 47962010
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | errors: (none)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | pilot state: finished 
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | transexitcode: 0
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | exeerrorcode: 0
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | exeerrordiag: 
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | exitcode: 0
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | exitmsg: OK
[2026-01-11 17:41:24] 2026-01-11 16:40:48,834 | INFO     | cpuconsumptiontime: 10881 s
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | nevents: 50
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | neventsw: 0
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | pid: 2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | pgrp: 2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | corecount: 12
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | event service: False
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | sizes: {0: 2284571, 1: 2284571, 4: 2284861, 11: 2284889, 1209: 2310199, 1210: 2319193, 1213: 2319377, 1218: 2319623}
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | --------------------------------------------------
[2026-01-11 17:41:24] 2026-01-11 16:40:48,835 | INFO     | 
[2026-01-11 17:41:24] 2026-01-11 16:40:48,836 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 17:41:24] 2026-01-11 16:40:48,855 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,855 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,855 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,855 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 17:41:24] 2026-01-11 16:40:48,857 | INFO     | job 6965384431 has completed (purged errors)
[2026-01-11 17:41:24] 2026-01-11 16:40:48,858 | INFO     | overall cleanup function is called
[2026-01-11 17:41:24] 2026-01-11 16:40:49,877 | INFO     | --- collectZombieJob: --- 10, [2284191]
[2026-01-11 17:41:24] 2026-01-11 16:40:49,878 | INFO     | zombie collector waiting for pid 2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:49,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 17:41:24] 2026-01-11 16:40:49,878 | INFO     | collected zombie processes
[2026-01-11 17:41:24] 2026-01-11 16:40:49,878 | INFO     | will attempt to kill all subprocesses of pid=2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:50,023 | INFO     | process IDs to be killed: [2284191] (in reverse order)
[2026-01-11 17:41:24] 2026-01-11 16:40:50,076 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 17:41:24] 2026-01-11 16:40:50,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 17:41:24] 2026-01-11 16:40:50,083 | INFO     | did not find any defunct processes belonging to 2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:50,089 | INFO     | did not find any defunct processes belonging to 2284191
[2026-01-11 17:41:24] 2026-01-11 16:40:50,089 | INFO     | ready for new job
[2026-01-11 17:41:24] 2026-01-11 16:40:50,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 17:41:24] 2026-01-11 16:40:50,091 | INFO     | ***************************************
[2026-01-11 17:41:24] 2026-01-11 16:40:50,091 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 17:41:24] 2026-01-11 16:40:50,091 | INFO     | ***************************************
[2026-01-11 17:41:24] 2026-01-11 16:40:50,091 | INFO     | 
[2026-01-11 17:41:24] 2026-01-11 16:40:50,093 | INFO     | architecture information:
[2026-01-11 17:41:24] 2026-01-11 16:40:50,093 | INFO     | executing command: cat /etc/os-release
[2026-01-11 17:41:24] 2026-01-11 16:40:50,108 | INFO     | cat /etc/os-release:
[2026-01-11 17:41:24] NAME="CentOS Linux"
[2026-01-11 17:41:24] VERSION="7 (Core)"
[2026-01-11 17:41:24] ID="centos"
[2026-01-11 17:41:24] ID_LIKE="rhel fedora"
[2026-01-11 17:41:24] VERSION_ID="7"
[2026-01-11 17:41:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 17:41:24] ANSI_COLOR="0;31"
[2026-01-11 17:41:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 17:41:24] HOME_URL="https://www.centos.org/"
[2026-01-11 17:41:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 17:41:24] 
[2026-01-11 17:41:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 17:41:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 17:41:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 17:41:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 17:41:24] 
[2026-01-11 17:41:24] 2026-01-11 16:40:50,108 | INFO     | ***************************************
[2026-01-11 17:41:24] 2026-01-11 16:40:50,612 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 17:41:24] 2026-01-11 16:40:50,627 | INFO     | sufficient remaining disk space (72760688640 B)
[2026-01-11 17:41:24] 2026-01-11 16:40:50,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 17:41:24] 2026-01-11 16:40:50,628 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 17:41:24] 2026-01-11 16:40:50,628 | INFO     | update_server=False
[2026-01-11 17:41:24] 2026-01-11 16:40:50,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 17:41:24] 2026-01-11 16:40:50,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:41:24] 2026-01-11 16:40:50,629 | INFO     | aborting loop
[2026-01-11 17:41:24] 2026-01-11 16:40:50,970 | INFO     | all payload control threads have been joined
[2026-01-11 17:41:24] 2026-01-11 16:40:51,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 17:41:24] 2026-01-11 16:40:51,033 | INFO     | all data control threads have been joined
[2026-01-11 17:41:24] 2026-01-11 16:40:51,634 | INFO     | [job] retrieve thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:51,634 | INFO     | [job] job monitor thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:51,711 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:51,975 | INFO     | [payload] control thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:52,039 | INFO     | [data] control thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:52,051 | INFO     | [payload] validate_post thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:52,143 | INFO     | all job control threads have been joined
[2026-01-11 17:41:24] 2026-01-11 16:40:52,318 | INFO     | [data] copytool_in thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:52,733 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:52,907 | INFO     | [job] validate thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:53,035 | INFO     | [data] copytool_out thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:53,054 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:53,079 | INFO     | [payload] failed_post thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:53,147 | INFO     | [job] control thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:53,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 17:41:24] 2026-01-11 16:40:53,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 17:41:24] 2026-01-11 16:40:54,516 | INFO     | [job] queue monitor thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:40:57,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:41:01,675 | INFO     | job.realtimelogging is not enabled
[2026-01-11 17:41:24] 2026-01-11 16:41:02,680 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 17:41:24] 2026-01-11 16:41:17,858 | INFO     | [monitor] cgroup control has ended
[2026-01-11 17:41:24] 2026-01-11 16:41:19,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965367514944)>', '<ExcThread(monitor, started 139964931110656)>']
[2026-01-11 17:41:24] 2026-01-11 16:41:20,579 | INFO     | PID=2277480 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | INFO     | .. there are 2 such processes running
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 17:41:24] 2026-01-11 16:41:20,580 | INFO     | [monitor] control thread has ended
[2026-01-11 17:41:24] 2026-01-11 16:41:24,090 | INFO     | all workflow threads have been joined
[2026-01-11 17:41:24] 2026-01-11 16:41:24,090 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 17:41:24] 2026-01-11 16:41:24,090 | INFO     | traces error code: 0
[2026-01-11 17:41:24] 2026-01-11 16:41:24,090 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 17:41:24] 2026-01-11 16:41:24,186 [wrapper] ==== pilot stdout END ====
[2026-01-11 17:41:24] 2026-01-11 16:41:24,188 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 17:41:24] 2026-01-11 16:41:24,191 [wrapper] pilotpid: 2277480
[2026-01-11 17:41:24] 2026-01-11 16:41:24,193 [wrapper] Pilot exit status: 0
[2026-01-11 17:41:24] 2026-01-11 16:41:24,203 [wrapper] pandaids: 6965384431
[2026-01-11 17:41:24] 2026-01-11 16:41:24,241 [wrapper] cleanup supervisor_pilot 2319239 2277481
[2026-01-11 17:41:24] 2026-01-11 16:41:24,244 [wrapper] Test setup, not cleaning
[2026-01-11 17:41:24] 2026-01-11 16:41:24,246 [wrapper] apfmon messages muted
[2026-01-11 17:41:24] 2026-01-11 16:41:24,249 [wrapper] ==== wrapper stdout END ====
[2026-01-11 17:41:24] 2026-01-11 16:41:24,251 [wrapper] ==== wrapper stderr END ====
[2026-01-11 17:41:24]  *** Error codes and diagnostics ***
[2026-01-11 17:41:24]     "exeErrorCode": 0,
[2026-01-11 17:41:24]     "exeErrorDiag": "",
[2026-01-11 17:41:24]     "pilotErrorCode": 0,
[2026-01-11 17:41:24]     "pilotErrorDiag": "",
[2026-01-11 17:41:24]  *** Listing of results directory ***
[2026-01-11 17:41:24] total 431472
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-11 17:41:24] -rwx------. 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:15 queuedata.json
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc       100 Jan 11 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 17:41:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 17:20 run_atlas
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc       105 Jan 11 17:20 job.xml
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc 392102156 Jan 11 17:20 EVNT.47962006._000112.pool.root.1
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc      6523 Jan 11 17:20 init_data.xml
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc     15847 Jan 11 17:20 start_atlas.sh
[2026-01-11 17:41:24] drwxrwx--x. 2 boinc boinc      4096 Jan 11 17:20 shared
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc    592615 Jan 11 17:20 input.tar.gz
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc         0 Jan 11 17:20 boinc_lockfile
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc      2891 Jan 11 17:20 pandaJob.out
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc    989556 Jan 11 17:20 agis_schedconf.cvmfs.json
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc   1516240 Jan 11 17:20 agis_ddmendpoints.agis.ALL.json
[2026-01-11 17:41:24] drwx------. 5 boinc boinc      4096 Jan 11 17:20 pilot3
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc       527 Jan 11 17:36 boinc_task_state.xml
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc  42197876 Jan 11 17:40 HITS.47962010._002567.pool.root.1
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc        95 Jan 11 17:40 pilot_heartbeat.json
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc      1014 Jan 11 17:40 memory_monitor_summary.json
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc   1571397 Jan 11 17:40 log.47962010._002567.job.log.tgz.1
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc      8548 Jan 11 17:40 heartbeat.json
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc      8192 Jan 11 17:41 boinc_mmap_file
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc        26 Jan 11 17:41 wrapper_checkpoint.txt
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc      4895 Jan 11 17:41 pilotlog.txt
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc    229884 Jan 11 17:41 log.47962010._002567.job.log.1
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc       353 Jan 11 17:41 output.list
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc       620 Jan 11 17:41 runtime_log
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc   1822720 Jan 11 17:41 result.tar.gz
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc      8864 Jan 11 17:41 runtime_log.err
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc       661 Jan 11 17:41 GszLDmSyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuZhKDmxkxtKn.diag
[2026-01-11 17:41:24] -rw-r--r--. 1 boinc boinc     22059 Jan 11 17:41 stderr.txt
[2026-01-11 17:41:24] HITS file was successfully produced:
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc 42197876 Jan 11 17:40 shared/HITS.pool.root.1
[2026-01-11 17:41:24]  *** Contents of shared directory: ***
[2026-01-11 17:41:24] total 426512
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc 392102156 Jan 11 17:20 ATLAS.root_0
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc     15847 Jan 11 17:20 start_atlas.sh
[2026-01-11 17:41:24] -rw-r--r--. 2 boinc boinc    592615 Jan 11 17:20 input.tar.gz
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc  42197876 Jan 11 17:40 HITS.pool.root.1
[2026-01-11 17:41:24] -rw-------. 1 boinc boinc   1822720 Jan 11 17:41 result.tar.gz
17:41:25 (2273599): run_atlas exited; CPU time 10826.081384
17:41:25 (2273599): called boinc_finish(0)

</stderr_txt>
]]>

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