Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:48:19 (74315): wrapper (7.7.26015): starting
08:48:19 (74315): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:48:19] Arguments: --nthreads 8
[2026-01-10 08:48:19] Threads: 8
[2026-01-10 08:48:19] Checking for CVMFS
[2026-01-10 08:48:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:48:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:48:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:48:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:48:21] 2.13.3.0 3539256 18429 216096 154981 2 273 29383762 40960000 12752 16776704 0 40576676 99.608 49864186 34955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:48:21] CVMFS is ok
[2026-01-10 08:48:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:48:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:48:21] Further information can be found at the LHC@home message board.
[2026-01-10 08:48:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:48:21] Checking for apptainer binary...
[2026-01-10 08:48:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:48:21] Running /usr/bin/apptainer --version
[2026-01-10 08:48:21] apptainer version 1.4.5-2.el9
[2026-01-10 08:48:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:48:22] c-210-31-1.aglt2.org
[2026-01-10 08:48:22] apptainer works
[2026-01-10 08:48:22] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:48:22] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:48:22] Starting ATLAS job with PandaID=6965384269
[2026-01-10 08:48:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:02:41]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:02:41] 2026-01-10 16:01:59,794 | INFO     | time since job start (7958s) is within the limit (349056.0s)
[2026-01-10 11:02:41] 2026-01-10 16:02:01,514 | INFO     | monitor loop #495: job 0:6965384269 is in state 'finished'
[2026-01-10 11:02:41] 2026-01-10 16:02:01,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:02:41] 2026-01-10 16:02:01,801 | INFO     | time since job start (7960s) is within the limit (349056.0s)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,408 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 11:02:41] 2026-01-10 16:02:03,412 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2878.8019464285712
[2026-01-10 11:02:41] 2026-01-10 16:02:03,423 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384269/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,423 | INFO     | extracted standard info from prmon json
[2026-01-10 11:02:41] 2026-01-10 16:02:03,423 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:02:41] 2026-01-10 16:02:03,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:02:41] 2026-01-10 16:02:03,427 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:02:41] 2026-01-10 16:02:03,427 | INFO     | sum of square deviations: 649961683.46875
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | sum of deviations: 41219750427.734375
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | mean x: 1768056977.140625
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | mean y: 2417630.0703125
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | intersect: -112125526513.97095
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | chi2: 7.838860152189035
[2026-01-10 11:02:41] 2026-01-10 16:02:03,428 | INFO     | sum of square deviations: 576821773.6260146
[2026-01-10 11:02:41] 2026-01-10 16:02:03,429 | INFO     | sum of deviations: 64157386897.8618
[2026-01-10 11:02:41] 2026-01-10 16:02:03,429 | INFO     | mean x: 1768056824.7723577
[2026-01-10 11:02:41] 2026-01-10 16:02:03,429 | INFO     | mean y: 2464811.9593495936
[2026-01-10 11:02:41] 2026-01-10 16:02:03,429 | INFO     | intersect: -196650836000.97192
[2026-01-10 11:02:41] 2026-01-10 16:02:03,430 | INFO     | chi2: 6.071865067856596
[2026-01-10 11:02:41] 2026-01-10 16:02:03,430 | INFO     | current chi2=6.071865067856596 (change=22.54147988389611 %)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,430 | INFO     | right removable region: 122
[2026-01-10 11:02:41] 2026-01-10 16:02:03,430 | INFO     | sum of square deviations: 576552994.504066
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | sum of deviations: -582158399.3496037
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | mean x: 1768057129.7886178
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | mean y: 2504437.1788617885
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | intersect: 1787751098.7138708
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | chi2: 3.3817715921690352
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | current chi2=3.3817715921690352 (change=56.85888603045608 %)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,431 | INFO     | sum of square deviations: 508887128.81355965
[2026-01-10 11:02:41] 2026-01-10 16:02:03,432 | INFO     | sum of deviations: -21167300624.01695
[2026-01-10 11:02:41] 2026-01-10 16:02:03,432 | INFO     | mean x: 1768057282.4237287
[2026-01-10 11:02:41] 2026-01-10 16:02:03,432 | INFO     | mean y: 2550290.220338983
[2026-01-10 11:02:41] 2026-01-10 16:02:03,432 | INFO     | intersect: 73545381103.80307
[2026-01-10 11:02:41] 2026-01-10 16:02:03,432 | INFO     | chi2: 2.07943198160795
[2026-01-10 11:02:41] 2026-01-10 16:02:03,433 | INFO     | current chi2=2.07943198160795 (change=38.510572789032665 %)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,433 | INFO     | sum of square deviations: 446788952.92035353
[2026-01-10 11:02:41] 2026-01-10 16:02:03,433 | INFO     | sum of deviations: -21752723916.575222
[2026-01-10 11:02:41] 2026-01-10 16:02:03,433 | INFO     | mean x: 1768057434.9734514
[2026-01-10 11:02:41] 2026-01-10 16:02:03,433 | INFO     | mean y: 2551698.1415929203
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | intersect: 86083608537.70424
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | chi2: 2.070681706427685
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | current chi2=2.070681706427685 (change=0.42080122156719946 %)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | left removable region: 30
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | sum of square deviations: 241028626.11956495
[2026-01-10 11:02:41] 2026-01-10 16:02:03,434 | INFO     | sum of deviations: -498530352.641304
[2026-01-10 11:02:41] 2026-01-10 16:02:03,435 | INFO     | mean x: 1768057709.597826
[2026-01-10 11:02:41] 2026-01-10 16:02:03,435 | INFO     | mean y: 2628287.7934782607
[2026-01-10 11:02:41] 2026-01-10 16:02:03,435 | INFO     | intersect: 3659581603.449591
[2026-01-10 11:02:41] 2026-01-10 16:02:03,435 | INFO     | chi2: 0.11691766186380141
[2026-01-10 11:02:41] 2026-01-10 16:02:03,435 | INFO     | current memory leak: -2.07 B/s (using 92 data points, chi2=0.12)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | could have reported an average CPU frequency of 2949 MHz (8 samples)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | ..............................
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | . Timing measurements:
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | . get job = 0 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | . initial setup = 4 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,436 | INFO     | . payload setup = 45 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,437 | INFO     | . stage-in = 0 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,437 | INFO     | . payload execution = 7834 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,437 | INFO     | . stage-out = 0 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,437 | INFO     | . log creation = 0 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,437 | INFO     | ..............................
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | 
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | job summary report
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | --------------------------------------------------
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | PanDA job id: 6965384269
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | task id: 47962010
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | errors: (none)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:02:41] 2026-01-10 16:02:03,633 | INFO     | pilot state: finished 
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | transexitcode: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | exeerrorcode: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | exeerrordiag: 
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | exitcode: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | exitmsg: OK
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | cpuconsumptiontime: 16066 s
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | nevents: 50
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | neventsw: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | pid: 90716
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | pgrp: 90716
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | corecount: 8
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | event service: False
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | sizes: {0: 2284398, 1: 2284597, 2: 2284597, 12: 2284625, 24: 2284653, 29: 2284943, 34: 2285099, 7884: 2313462, 7887: 2322456, 7889: 2322512, 7899: 2322758}
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | --------------------------------------------------
[2026-01-10 11:02:41] 2026-01-10 16:02:03,634 | INFO     | 
[2026-01-10 11:02:41] 2026-01-10 16:02:03,635 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 11:02:41] 2026-01-10 16:02:03,658 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,658 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:02:41] 2026-01-10 16:02:03,660 | INFO     | job 6965384269 has completed (purged errors)
[2026-01-10 11:02:41] 2026-01-10 16:02:03,660 | INFO     | overall cleanup function is called
[2026-01-10 11:02:41] 2026-01-10 16:02:04,675 | INFO     | --- collectZombieJob: --- 10, [90716]
[2026-01-10 11:02:41] 2026-01-10 16:02:04,675 | INFO     | zombie collector waiting for pid 90716
[2026-01-10 11:02:41] 2026-01-10 16:02:04,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:02:41] 2026-01-10 16:02:04,679 | INFO     | collected zombie processes
[2026-01-10 11:02:41] 2026-01-10 16:02:04,679 | INFO     | will attempt to kill all subprocesses of pid=90716
[2026-01-10 11:02:41] 2026-01-10 16:02:05,328 | INFO     | process IDs to be killed: [90716] (in reverse order)
[2026-01-10 11:02:41] 2026-01-10 16:02:05,432 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:02:41] 2026-01-10 16:02:05,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:02:41] 2026-01-10 16:02:05,444 | INFO     | did not find any defunct processes belonging to 90716
[2026-01-10 11:02:41] 2026-01-10 16:02:05,456 | INFO     | did not find any defunct processes belonging to 90716
[2026-01-10 11:02:41] 2026-01-10 16:02:05,456 | INFO     | ready for new job
[2026-01-10 11:02:41] 2026-01-10 16:02:05,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:02:41] 2026-01-10 16:02:05,458 | INFO     | ***************************************
[2026-01-10 11:02:41] 2026-01-10 16:02:05,460 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:02:41] 2026-01-10 16:02:05,460 | INFO     | ***************************************
[2026-01-10 11:02:41] 2026-01-10 16:02:05,460 | INFO     | 
[2026-01-10 11:02:41] 2026-01-10 16:02:05,463 | INFO     | architecture information:
[2026-01-10 11:02:41] 2026-01-10 16:02:05,464 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:02:41] 2026-01-10 16:02:05,483 | INFO     | cat /etc/os-release:
[2026-01-10 11:02:41] NAME="CentOS Linux"
[2026-01-10 11:02:41] VERSION="7 (Core)"
[2026-01-10 11:02:41] ID="centos"
[2026-01-10 11:02:41] ID_LIKE="rhel fedora"
[2026-01-10 11:02:41] VERSION_ID="7"
[2026-01-10 11:02:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:02:41] ANSI_COLOR="0;31"
[2026-01-10 11:02:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:02:41] HOME_URL="https://www.centos.org/"
[2026-01-10 11:02:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:02:41] 
[2026-01-10 11:02:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:02:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:02:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:02:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:02:41] 
[2026-01-10 11:02:41] 2026-01-10 16:02:05,483 | INFO     | ***************************************
[2026-01-10 11:02:41] 2026-01-10 16:02:05,987 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 11:02:41] 2026-01-10 16:02:06,017 | INFO     | sufficient remaining disk space (74775003136 B)
[2026-01-10 11:02:41] 2026-01-10 16:02:06,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:02:41] 2026-01-10 16:02:06,018 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:02:41] 2026-01-10 16:02:06,018 | INFO     | update_server=False
[2026-01-10 11:02:41] 2026-01-10 16:02:06,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:02:41] 2026-01-10 16:02:06,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:02:41] 2026-01-10 16:02:06,018 | INFO     | aborting loop
[2026-01-10 11:02:41] 2026-01-10 16:02:06,127 | INFO     | all job control threads have been joined
[2026-01-10 11:02:41] 2026-01-10 16:02:06,491 | INFO     | all data control threads have been joined
[2026-01-10 11:02:41] 2026-01-10 16:02:06,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:02:41] 2026-01-10 16:02:06,771 | INFO     | all payload control threads have been joined
[2026-01-10 11:02:41] 2026-01-10 16:02:07,024 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,025 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,132 | INFO     | [job] control thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,167 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,391 | INFO     | [job] validate thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,394 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,461 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,497 | INFO     | [data] control thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,530 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,712 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:07,785 | INFO     | [payload] control thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:08,002 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:08,129 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:08,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:02:41] 2026-01-10 16:02:08,657 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:08,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:02:41] 2026-01-10 16:02:09,551 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:12,764 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:02:41] 2026-01-10 16:02:35,039 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:02:41] 2026-01-10 16:02:35,712 | INFO     | PID=79797 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 11:02:41] 2026-01-10 16:02:35,713 | INFO     | .. there are 13 such processes running
[2026-01-10 11:02:41] 2026-01-10 16:02:35,713 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:02:41] 2026-01-10 16:02:35,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:02:41] 2026-01-10 16:02:35,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:02:41] 2026-01-10 16:02:36,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140488775333696)>', '<ExcThread(monitor, started 140488413787904)>']
[2026-01-10 11:02:41] 2026-01-10 16:02:36,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:02:41] 2026-01-10 16:02:36,720 | INFO     | [monitor] control thread has ended
[2026-01-10 11:02:41] 2026-01-10 16:02:41,454 | INFO     | all workflow threads have been joined
[2026-01-10 11:02:41] 2026-01-10 16:02:41,454 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:02:41] 2026-01-10 16:02:41,454 | INFO     | traces error code: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:41,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:02:41] 2026-01-10 16:02:41,718 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:02:41] 2026-01-10 16:02:41,721 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:02:41] 2026-01-10 16:02:41,724 [wrapper] pilotpid: 79797
[2026-01-10 11:02:41] 2026-01-10 16:02:41,727 [wrapper] Pilot exit status: 0
[2026-01-10 11:02:41] 2026-01-10 16:02:41,740 [wrapper] pandaids: 6965384269
[2026-01-10 11:02:41] 2026-01-10 16:02:41,810 [wrapper] cleanup supervisor_pilot  382255 79798
[2026-01-10 11:02:41] 2026-01-10 16:02:41,816 [wrapper] Test setup, not cleaning
[2026-01-10 11:02:41] 2026-01-10 16:02:41,819 [wrapper] apfmon messages muted
[2026-01-10 11:02:41] 2026-01-10 16:02:41,822 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:02:41] 2026-01-10 16:02:41,825 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:02:41]  *** Error codes and diagnostics ***
[2026-01-10 11:02:41]     "exeErrorCode": 0,
[2026-01-10 11:02:41]     "exeErrorDiag": "",
[2026-01-10 11:02:41]     "pilotErrorCode": 0,
[2026-01-10 11:02:41]     "pilotErrorDiag": "",
[2026-01-10 11:02:41]  *** Listing of results directory ***
[2026-01-10 11:02:41] total 435476
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 11:02:41] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:02:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:48 run_atlas
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:48 job.xml
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas 391552305 Jan 10 08:48 EVNT.47962006._000101.pool.root.1
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:48 start_atlas.sh
[2026-01-10 11:02:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:48 shared
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:48 input.tar.gz
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:48 boinc_lockfile
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:48 pandaJob.out
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas        57 Jan 10 08:48 setup.sh.local
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas    989556 Jan 10 08:49 agis_schedconf.cvmfs.json
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:02:41] drwx------. 5 boincer umatlas      4096 Jan 10 08:49 pilot3
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas       529 Jan 10 10:49 boinc_task_state.xml
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 10:55 init_data.xml
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas  45931842 Jan 10 11:01 HITS.47962010._002410.pool.root.1
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas      1042 Jan 10 11:01 memory_monitor_summary.json
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas   1233794 Jan 10 11:01 log.47962010._002410.job.log.tgz.1
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas      8563 Jan 10 11:02 heartbeat.json
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas        95 Jan 10 11:02 pilot_heartbeat.json
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 11:02 boinc_mmap_file
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas        27 Jan 10 11:02 wrapper_checkpoint.txt
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas      4822 Jan 10 11:02 pilotlog.txt
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas   1029818 Jan 10 11:02 log.47962010._002410.job.log.1
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas       353 Jan 10 11:02 output.list
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas       620 Jan 10 11:02 runtime_log
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas   2283520 Jan 10 11:02 result.tar.gz
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 11:02 runtime_log.err
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas       656 Jan 10 11:02 AUULDmayny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQahKDmHAliVo.diag
[2026-01-10 11:02:41] -rw-r--r--. 1 boincer umatlas     21239 Jan 10 11:02 stderr.txt
[2026-01-10 11:02:41] HITS file was successfully produced:
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas 45931842 Jan 10 11:01 shared/HITS.pool.root.1
[2026-01-10 11:02:41]  *** Contents of shared directory: ***
[2026-01-10 11:02:41] total 430060
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas 391552305 Jan 10 08:48 ATLAS.root_0
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:48 start_atlas.sh
[2026-01-10 11:02:41] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:48 input.tar.gz
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas  45931842 Jan 10 11:01 HITS.pool.root.1
[2026-01-10 11:02:41] -rw-------. 1 boincer umatlas   2283520 Jan 10 11:02 result.tar.gz
11:02:43 (74315): run_atlas exited; CPU time 16191.983503
11:02:43 (74315): called boinc_finish(0)

</stderr_txt>
]]>

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