Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:44 (2575226): wrapper (7.7.26015): starting
08:21:44 (2575226): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:21:44] Arguments: --nthreads 8
[2026-01-10 08:21:44] Threads: 8
[2026-01-10 08:21:44] Checking for CVMFS
[2026-01-10 08:21:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:45] 2.13.3.0 15513 94851 707512 154981 3 19 37573995 40960000 23754 16776704 0 821691585 99.832 354775760 31470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:21:45] CVMFS is ok
[2026-01-10 08:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:45] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:45] Checking for apptainer binary...
[2026-01-10 08:21:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:45] Running /usr/bin/apptainer --version
[2026-01-10 08:21:46] apptainer version 1.4.5-2.el9
[2026-01-10 08:21:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:46] c-1-1.aglt2.org
[2026-01-10 08:21:46] apptainer works
[2026-01-10 08:21:46] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:21:46] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:21:46] Starting ATLAS job with PandaID=6965384182
[2026-01-10 08:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:18:44]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:18:44] 2026-01-10 15:18:09,920 | INFO     | monitor loop #399: job 0:6965384182 is in state 'finished'
[2026-01-10 10:18:44] 2026-01-10 15:18:09,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,231 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:18:44] 2026-01-10 15:18:10,316 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2915.7963874999996
[2026-01-10 10:18:44] 2026-01-10 15:18:10,365 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384182/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,366 | INFO     | extracted standard info from prmon json
[2026-01-10 10:18:44] 2026-01-10 15:18:10,366 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:18:44] 2026-01-10 15:18:10,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:18:44] 2026-01-10 15:18:10,374 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:18:44] 2026-01-10 15:18:10,375 | INFO     | sum of square deviations: 435468761.42857164
[2026-01-10 10:18:44] 2026-01-10 15:18:10,375 | INFO     | sum of deviations: -7543938836.000018
[2026-01-10 10:18:44] 2026-01-10 15:18:10,375 | INFO     | mean x: 1768054813.5714285
[2026-01-10 10:18:44] 2026-01-10 15:18:10,375 | INFO     | mean y: 2381292.0625
[2026-01-10 10:18:44] 2026-01-10 15:18:10,376 | INFO     | intersect: 30631667600.73397
[2026-01-10 10:18:44] 2026-01-10 15:18:10,376 | INFO     | chi2: 6.7770748247724075
[2026-01-10 10:18:44] 2026-01-10 15:18:10,376 | INFO     | sum of square deviations: 379795842.05607414
[2026-01-10 10:18:44] 2026-01-10 15:18:10,377 | INFO     | sum of deviations: 22672248070.504642
[2026-01-10 10:18:44] 2026-01-10 15:18:10,385 | INFO     | mean x: 1768054661.2149532
[2026-01-10 10:18:44] 2026-01-10 15:18:10,385 | INFO     | mean y: 2463633.9345794395
[2026-01-10 10:18:44] 2026-01-10 15:18:10,385 | INFO     | intersect: -105543120183.592
[2026-01-10 10:18:44] 2026-01-10 15:18:10,385 | INFO     | chi2: 3.4112229846424116
[2026-01-10 10:18:44] 2026-01-10 15:18:10,385 | INFO     | current chi2=3.4112229846424116 (change=49.66526011822557 %)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,386 | INFO     | sum of square deviations: 329047944.67647
[2026-01-10 10:18:44] 2026-01-10 15:18:10,386 | INFO     | sum of deviations: 33581564477.20588
[2026-01-10 10:18:44] 2026-01-10 15:18:10,386 | INFO     | mean x: 1768054508.7941177
[2026-01-10 10:18:44] 2026-01-10 15:18:10,386 | INFO     | mean y: 2496350.343137255
[2026-01-10 10:18:44] 2026-01-10 15:18:10,387 | INFO     | intersect: -180439404129.12225
[2026-01-10 10:18:44] 2026-01-10 15:18:10,387 | INFO     | chi2: 2.8699045671713588
[2026-01-10 10:18:44] 2026-01-10 15:18:10,387 | INFO     | current chi2=2.8699045671713588 (change=15.868749123352826 %)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,387 | INFO     | right removable region: 101
[2026-01-10 10:18:44] 2026-01-10 15:18:10,387 | INFO     | sum of square deviations: 379586002.05607414
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | sum of deviations: -34920217483.23364
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | mean x: 1768054966.2149532
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | mean y: 2455533.271028037
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | intersect: 162655618737.68457
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | chi2: 4.136846624702503
[2026-01-10 10:18:44] 2026-01-10 15:18:10,388 | INFO     | current chi2=4.136846624702503 (change=38.958227086692524 %)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,401 | INFO     | sum of square deviations: 328765463.37254834
[2026-01-10 10:18:44] 2026-01-10 15:18:10,401 | INFO     | sum of deviations: -37099352939.68627
[2026-01-10 10:18:44] 2026-01-10 15:18:10,401 | INFO     | mean x: 1768055118.745098
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | mean y: 2462045.6274509802
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | intersect: 199517642850.4137
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | chi2: 4.054589680235476
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | current chi2=4.054589680235476 (change=1.9883972486638364 %)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | left removable region: 20
[2026-01-10 10:18:44] 2026-01-10 15:18:10,402 | INFO     | sum of square deviations: 164680204.2469135
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | sum of deviations: 139121398.9506173
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | mean x: 1768055088.493827
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | mean y: 2625213.901234568
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | intersect: -1491023026.6864247
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | chi2: 0.06937660678060417
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | current memory leak: 0.84 B/s (using 81 data points, chi2=0.07)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,403 | INFO     | could have reported an average CPU frequency of 2887 MHz (7 samples)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | ..............................
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . Timing measurements:
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . get job = 0 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . initial setup = 2 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . payload setup = 22 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . stage-in = 0 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . payload execution = 6844 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . stage-out = 2 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | . log creation = 0 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,404 | INFO     | ..............................
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | 
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | job summary report
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | --------------------------------------------------
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | PanDA job id: 6965384182
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | task id: 47962010
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | errors: (none)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | pilot state: finished 
[2026-01-10 10:18:44] 2026-01-10 15:18:10,671 | INFO     | transexitcode: 0
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | exeerrorcode: 0
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | exeerrordiag: 
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | exitcode: 0
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | exitmsg: OK
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | cpuconsumptiontime: 14786 s
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | nevents: 50
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | neventsw: 0
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | pid: 2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | pgrp: 2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | corecount: 8
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | event service: False
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | sizes: {0: 2283741, 1: 2284597, 12: 2284597, 15: 2284887, 23: 2284915, 6871: 2312887, 6875: 2321881, 6877: 2321937, 6911: 2322183}
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | --------------------------------------------------
[2026-01-10 10:18:44] 2026-01-10 15:18:10,672 | INFO     | 
[2026-01-10 10:18:44] 2026-01-10 15:18:10,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 10:18:44] 2026-01-10 15:18:10,814 | INFO     | PID=2585671 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:18:44] 2026-01-10 15:18:10,814 | INFO     | .. there are 38 such processes running
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:18:44] 2026-01-10 15:18:10,859 | INFO     | job 6965384182 has completed (purged errors)
[2026-01-10 10:18:44] 2026-01-10 15:18:10,860 | INFO     | overall cleanup function is called
[2026-01-10 10:18:44] 2026-01-10 15:18:11,879 | INFO     | --- collectZombieJob: --- 10, [2608751]
[2026-01-10 10:18:44] 2026-01-10 15:18:11,881 | INFO     | zombie collector waiting for pid 2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:11,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:18:44] 2026-01-10 15:18:11,881 | INFO     | collected zombie processes
[2026-01-10 10:18:44] 2026-01-10 15:18:11,881 | INFO     | will attempt to kill all subprocesses of pid=2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:12,723 | INFO     | process IDs to be killed: [2608751] (in reverse order)
[2026-01-10 10:18:44] 2026-01-10 15:18:12,895 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:18:44] 2026-01-10 15:18:12,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:18:44] 2026-01-10 15:18:12,922 | INFO     | did not find any defunct processes belonging to 2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:12,969 | INFO     | did not find any defunct processes belonging to 2608751
[2026-01-10 10:18:44] 2026-01-10 15:18:12,969 | INFO     | ready for new job
[2026-01-10 10:18:44] 2026-01-10 15:18:12,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:18:44] 2026-01-10 15:18:12,971 | INFO     | ***************************************
[2026-01-10 10:18:44] 2026-01-10 15:18:12,971 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:18:44] 2026-01-10 15:18:12,971 | INFO     | ***************************************
[2026-01-10 10:18:44] 2026-01-10 15:18:12,971 | INFO     | 
[2026-01-10 10:18:44] 2026-01-10 15:18:12,975 | INFO     | architecture information:
[2026-01-10 10:18:44] 2026-01-10 15:18:12,983 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:18:44] 2026-01-10 15:18:13,049 | INFO     | cat /etc/os-release:
[2026-01-10 10:18:44] NAME="CentOS Linux"
[2026-01-10 10:18:44] VERSION="7 (Core)"
[2026-01-10 10:18:44] ID="centos"
[2026-01-10 10:18:44] ID_LIKE="rhel fedora"
[2026-01-10 10:18:44] VERSION_ID="7"
[2026-01-10 10:18:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:18:44] ANSI_COLOR="0;31"
[2026-01-10 10:18:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:18:44] HOME_URL="https://www.centos.org/"
[2026-01-10 10:18:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:18:44] 
[2026-01-10 10:18:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:18:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:18:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:18:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:18:44] 
[2026-01-10 10:18:44] 2026-01-10 15:18:13,049 | INFO     | ***************************************
[2026-01-10 10:18:44] 2026-01-10 15:18:13,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 10:18:44] 2026-01-10 15:18:13,643 | INFO     | sufficient remaining disk space (107362648064 B)
[2026-01-10 10:18:44] 2026-01-10 15:18:13,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:18:44] 2026-01-10 15:18:13,644 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:18:44] 2026-01-10 15:18:13,644 | INFO     | update_server=False
[2026-01-10 10:18:44] 2026-01-10 15:18:13,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:18:44] 2026-01-10 15:18:13,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:18:44] 2026-01-10 15:18:13,645 | INFO     | aborting loop
[2026-01-10 10:18:44] 2026-01-10 15:18:13,649 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:18:45] 2026-01-10 15:18:14,192 | INFO     | all job control threads have been joined
[2026-01-10 10:18:45] 2026-01-10 15:18:14,573 | INFO     | all data control threads have been joined
[2026-01-10 10:18:45] 2026-01-10 15:18:14,651 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:14,654 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:14,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:18:45] 2026-01-10 15:18:14,833 | INFO     | all payload control threads have been joined
[2026-01-10 10:18:45] 2026-01-10 15:18:15,142 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,199 | INFO     | [job] control thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,225 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,420 | INFO     | [job] validate thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,518 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,579 | INFO     | [data] control thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:18:45] 2026-01-10 15:18:15,656 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,676 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,751 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:15,839 | INFO     | [payload] control thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:16,141 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:16,146 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:16,630 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:18,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:18:45] 2026-01-10 15:18:33,076 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:18:45] 2026-01-10 15:18:34,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140617629558592)>', '<ExcThread(monitor, started 140617145374464)>']
[2026-01-10 10:18:45] 2026-01-10 15:18:39,612 | INFO     | all workflow threads have been joined
[2026-01-10 10:18:45] 2026-01-10 15:18:39,612 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:18:45] 2026-01-10 15:18:39,612 | INFO     | traces error code: 0
[2026-01-10 10:18:45] 2026-01-10 15:18:39,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:18:45] 2026-01-10 15:18:43,656 | INFO     | PID=2585671 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | INFO     | .. there are 38 such processes running
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:18:45] 2026-01-10 15:18:43,657 | INFO     | [monitor] control thread has ended
[2026-01-10 10:18:45] 2026-01-10 15:18:43,880 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:18:45] 2026-01-10 15:18:43,914 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:18:45] 2026-01-10 15:18:43,933 [wrapper] pilotpid: 2585671
[2026-01-10 10:18:45] 2026-01-10 15:18:43,953 [wrapper] Pilot exit status: 0
[2026-01-10 10:18:45] 2026-01-10 15:18:44,021 [wrapper] pandaids: 6965384182
[2026-01-10 10:18:45] 2026-01-10 15:18:44,427 [wrapper] cleanup supervisor_pilot 3760742 2585672
[2026-01-10 10:18:45] 2026-01-10 15:18:44,431 [wrapper] Test setup, not cleaning
[2026-01-10 10:18:45] 2026-01-10 15:18:44,462 [wrapper] apfmon messages muted
[2026-01-10 10:18:45] 2026-01-10 15:18:44,476 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:18:45] 2026-01-10 15:18:44,493 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:18:45]  *** Error codes and diagnostics ***
[2026-01-10 10:18:45]     "exeErrorCode": 0,
[2026-01-10 10:18:45]     "exeErrorDiag": "",
[2026-01-10 10:18:45]     "pilotErrorCode": 0,
[2026-01-10 10:18:45]     "pilotErrorDiag": "",
[2026-01-10 10:18:45]  *** Listing of results directory ***
[2026-01-10 10:18:45] total 435412
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:18:45] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:18:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 10:18:45] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:21 EVNT.47962006._000088.pool.root.1
[2026-01-10 10:18:45] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 10:18:45] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:21 shared
[2026-01-10 10:18:45] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:21 input.tar.gz
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:21 boinc_lockfile
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:18:45] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas       529 Jan 10 10:02 boinc_task_state.xml
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas      6838 Jan 10 10:11 init_data.xml
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas  45441386 Jan 10 10:17 HITS.47962010._002323.pool.root.1
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas      1040 Jan 10 10:17 memory_monitor_summary.json
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas   1218778 Jan 10 10:17 log.47962010._002323.job.log.tgz.1
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas        95 Jan 10 10:17 pilot_heartbeat.json
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas      8557 Jan 10 10:18 heartbeat.json
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:18 wrapper_checkpoint.txt
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas       823 Jan 10 10:18 pilotlog.txt
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas    868601 Jan 10 10:18 log.47962010._002323.job.log.1
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:18 boinc_mmap_file
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas       353 Jan 10 10:18 output.list
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:18 runtime_log
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas   2109440 Jan 10 10:18 result.tar.gz
[2026-01-10 10:18:45] -rw-------. 1 boincer umatlas       650 Jan 10 10:18 t1ELDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVqmKDmNOUXOm.diag
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas      9327 Jan 10 10:18 runtime_log.err
[2026-01-10 10:18:45] -rw-r--r--. 1 boincer umatlas     21315 Jan 10 10:18 stderr.txt
[2026-01-10 10:19:25] HITS file was successfully produced:
[2026-01-10 10:19:25] -rw-------. 1 boincer umatlas 45441386 Jan 10 10:17 shared/HITS.pool.root.1
[2026-01-10 10:19:25]  *** Contents of shared directory: ***
[2026-01-10 10:19:25] total 430172
[2026-01-10 10:19:25] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:21 ATLAS.root_0
[2026-01-10 10:19:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 10:19:25] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:21 input.tar.gz
[2026-01-10 10:19:25] -rw-------. 1 boincer umatlas  45441386 Jan 10 10:17 HITS.pool.root.1
[2026-01-10 10:19:25] -rw-------. 1 boincer umatlas   2109440 Jan 10 10:18 result.tar.gz
10:19:27 (2575226): run_atlas exited; CPU time 15012.204814
10:19:27 (2575226): called boinc_finish(0)

</stderr_txt>
]]>

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