Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:20 (2757032): wrapper (7.7.26015): starting
08:19:20 (2757032): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:19:20] Arguments: --nthreads 8
[2026-01-10 08:19:20] Threads: 8
[2026-01-10 08:19:20] Checking for CVMFS
[2026-01-10 08:19:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:19:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:19:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:19:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:19:21] 2.13.3.0 5782 22253 184068 154981 2 14 36999003 40960000 7646 16776704 0 24403704 99.700 17159769 39370 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:19:21] CVMFS is ok
[2026-01-10 08:19:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:19:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:19:21] Further information can be found at the LHC@home message board.
[2026-01-10 08:19:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:19:21] Checking for apptainer binary...
[2026-01-10 08:19:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:19:21] Running /usr/bin/apptainer --version
[2026-01-10 08:19:21] apptainer version 1.4.5-2.el9
[2026-01-10 08:19:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:19:22] c-206-39.aglt2.org
[2026-01-10 08:19:22] apptainer works
[2026-01-10 08:19:22] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:19:22] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:19:22] Starting ATLAS job with PandaID=6965384091
[2026-01-10 08:19:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:35:07]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:35:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:35:07]  replicas=None
[2026-01-10 09:35:07]  scope=mc16_13TeV
[2026-01-10 09:35:07]  status=None
[2026-01-10 09:35:07]  status_code=0
[2026-01-10 09:35:07]  storage_token=
[2026-01-10 09:35:07]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6965384091/log.47962010._002232.job.log.tgz.1
[2026-01-10 09:35:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/91/87/log.47962010._002232.job.log.tgz.1
[2026-01-10 09:35:07]  workdir=None
[2026-01-10 09:35:07] ]
[2026-01-10 09:35:07] 2026-01-10 14:34:16,212 | INFO     | transferring file log.47962010._002232.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965384091/log.47962010._002232.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:35:07] 2026-01-10 14:34:16,212 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384091/log.47962010._002232.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002232.job
[2026-01-10 09:35:07] 2026-01-10 14:34:16,239 | INFO     | adding to output.list: log.47962010._002232.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/91/87/log.47962010._002232.job.log.tgz.
[2026-01-10 09:35:07] 2026-01-10 14:34:16,240 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:35:07] 2026-01-10 14:34:16,240 | INFO     | summary of transferred files:
[2026-01-10 09:35:07] 2026-01-10 14:34:16,240 | INFO     |  -- lfn=log.47962010._002232.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:35:07] 2026-01-10 14:34:16,240 | INFO     | stage-out finished correctly
[2026-01-10 09:35:07] 2026-01-10 14:34:16,570 | INFO     | time since job start (4402s) is within the limit (349056.0s)
[2026-01-10 09:35:07] 2026-01-10 14:34:16,695 | INFO     | monitor loop #318: job 0:6965384091 is in state 'finished'
[2026-01-10 09:35:07] 2026-01-10 14:34:16,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:35:07] 2026-01-10 14:34:18,576 | INFO     | time since job start (4404s) is within the limit (349056.0s)
[2026-01-10 09:35:07] 2026-01-10 14:34:19,200 | INFO     | monitor loop #319: job 0:6965384091 is in state 'finished'
[2026-01-10 09:35:07] 2026-01-10 14:34:19,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:35:07] 2026-01-10 14:34:19,794 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:35:07] 2026-01-10 14:34:20,399 | INFO     | job 6965384091 has state=finished
[2026-01-10 09:35:07] 2026-01-10 14:34:20,399 | INFO     | preparing for final server update for job 6965384091 in state='finished'
[2026-01-10 09:35:07] 2026-01-10 14:34:20,400 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:35:07] 2026-01-10 14:34:20,400 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:35:07] 2026-01-10 14:34:20,400 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:35:07] 2026-01-10 14:34:20,400 | INFO     | job 6965384091 has finished - writing final server update
[2026-01-10 09:35:07] 2026-01-10 14:34:20,400 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:35:07] 2026-01-10 14:34:20,409 | INFO     | executing command: lscpu
[2026-01-10 09:35:07] 2026-01-10 14:34:20,463 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:35:07] 2026-01-10 14:34:20,583 | INFO     | time since job start (4406s) is within the limit (349056.0s)
[2026-01-10 09:35:07] 2026-01-10 14:34:21,703 | INFO     | monitor loop #320: job 0:6965384091 is in state 'finished'
[2026-01-10 09:35:07] 2026-01-10 14:34:21,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:35:07] 2026-01-10 14:34:22,593 | INFO     | time since job start (4408s) is within the limit (349056.0s)
[2026-01-10 09:35:07] 2026-01-10 14:34:24,206 | INFO     | monitor loop #321: job 0:6965384091 is in state 'finished'
[2026-01-10 09:35:07] 2026-01-10 14:34:24,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:35:07] 2026-01-10 14:34:24,599 | INFO     | time since job start (4410s) is within the limit (349056.0s)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,220 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:35:07] 2026-01-10 14:34:25,236 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3231.119
[2026-01-10 09:35:07] 2026-01-10 14:34:25,246 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384091/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,247 | INFO     | extracted standard info from prmon json
[2026-01-10 09:35:07] 2026-01-10 14:34:25,247 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:35:07] 2026-01-10 14:34:25,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:35:07] 2026-01-10 14:34:25,249 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | sum of square deviations: 73885680.46774182
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | sum of deviations: 38876743267.38711
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | mean x: 1768053627.6290324
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | mean y: 2177315.4516129033
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | intersect: -930302132385.2115
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | chi2: 6.634503326249764
[2026-01-10 09:35:07] 2026-01-10 14:34:25,250 | INFO     | current memory leak: 526.17 B/s (using 62 data points, chi2=6.63)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | could have reported an average CPU frequency of 3249 MHz (6 samples)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | ..............................
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . Timing measurements:
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . get job = 0 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . initial setup = 4 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . payload setup = 71 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . stage-in = 0 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . payload execution = 4239 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . stage-out = 0 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | . log creation = 0 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,251 | INFO     | ..............................
[2026-01-10 09:35:07] 2026-01-10 14:34:25,333 | INFO     | 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | job summary report
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | --------------------------------------------------
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | PanDA job id: 6965384091
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | task id: 47962010
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | errors: (none)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | pilot state: finished 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | transexitcode: 0
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | exeerrorcode: 0
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | exeerrordiag: 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | exitcode: 0
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | exitmsg: OK
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | cpuconsumptiontime: 11474 s
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | nevents: 50
[2026-01-10 09:35:07] 2026-01-10 14:34:25,334 | INFO     | neventsw: 0
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | pid: 2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | pgrp: 2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | corecount: 8
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | event service: False
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | sizes: {0: 2283741, 1: 2284597, 12: 2284597, 23: 2284625, 34: 2284653, 42: 2284943, 45: 2285127, 4313: 2311805, 4314: 2311804, 4315: 2320854, 4318: 2320910, 4324: 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | --------------------------------------------------
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | 
[2026-01-10 09:35:07] 2026-01-10 14:34:25,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:35:07] 2026-01-10 14:34:25,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | job 6965384091 has completed (purged errors)
[2026-01-10 09:35:07] 2026-01-10 14:34:25,360 | INFO     | overall cleanup function is called
[2026-01-10 09:35:07] 2026-01-10 14:34:26,375 | INFO     | --- collectZombieJob: --- 10, [2779860]
[2026-01-10 09:35:07] 2026-01-10 14:34:26,375 | INFO     | zombie collector waiting for pid 2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:26,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:35:07] 2026-01-10 14:34:26,375 | INFO     | collected zombie processes
[2026-01-10 09:35:07] 2026-01-10 14:34:26,376 | INFO     | will attempt to kill all subprocesses of pid=2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:26,607 | INFO     | process IDs to be killed: [2779860] (in reverse order)
[2026-01-10 09:35:07] 2026-01-10 14:34:26,713 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:35:07] 2026-01-10 14:34:26,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:35:07] 2026-01-10 14:34:26,724 | INFO     | did not find any defunct processes belonging to 2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:26,731 | INFO     | did not find any defunct processes belonging to 2779860
[2026-01-10 09:35:07] 2026-01-10 14:34:26,732 | INFO     | ready for new job
[2026-01-10 09:35:07] 2026-01-10 14:34:26,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:35:07] 2026-01-10 14:34:26,733 | INFO     | ***************************************
[2026-01-10 09:35:07] 2026-01-10 14:34:26,733 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:35:07] 2026-01-10 14:34:26,733 | INFO     | ***************************************
[2026-01-10 09:35:07] 2026-01-10 14:34:26,734 | INFO     | 
[2026-01-10 09:35:07] 2026-01-10 14:34:26,737 | INFO     | architecture information:
[2026-01-10 09:35:07] 2026-01-10 14:34:26,738 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:35:07] 2026-01-10 14:34:26,758 | INFO     | cat /etc/os-release:
[2026-01-10 09:35:07] NAME="CentOS Linux"
[2026-01-10 09:35:07] VERSION="7 (Core)"
[2026-01-10 09:35:07] ID="centos"
[2026-01-10 09:35:07] ID_LIKE="rhel fedora"
[2026-01-10 09:35:07] VERSION_ID="7"
[2026-01-10 09:35:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:35:07] ANSI_COLOR="0;31"
[2026-01-10 09:35:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:35:07] HOME_URL="https://www.centos.org/"
[2026-01-10 09:35:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:35:07] 
[2026-01-10 09:35:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:35:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:35:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:35:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:35:07] 
[2026-01-10 09:35:07] 2026-01-10 14:34:26,758 | INFO     | ***************************************
[2026-01-10 09:35:07] 2026-01-10 14:34:27,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:35:07] 2026-01-10 14:34:27,293 | INFO     | sufficient remaining disk space (85053145088 B)
[2026-01-10 09:35:07] 2026-01-10 14:34:27,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:35:07] 2026-01-10 14:34:27,293 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:35:07] 2026-01-10 14:34:27,294 | INFO     | update_server=False
[2026-01-10 09:35:07] 2026-01-10 14:34:27,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:35:07] 2026-01-10 14:34:27,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:35:07] 2026-01-10 14:34:27,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:07] 2026-01-10 14:34:27,652 | INFO     | all data control threads have been joined
[2026-01-10 09:35:07] 2026-01-10 14:34:27,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:35:07] 2026-01-10 14:34:27,717 | INFO     | aborting loop
[2026-01-10 09:35:07] 2026-01-10 14:34:28,299 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,301 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,657 | INFO     | [data] control thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,666 | INFO     | all payload control threads have been joined
[2026-01-10 09:35:07] 2026-01-10 14:34:28,723 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,765 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,831 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:28,893 | INFO     | all job control threads have been joined
[2026-01-10 09:35:07] 2026-01-10 14:34:28,918 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,012 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,120 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,303 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,308 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,588 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,671 | INFO     | [payload] control thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,698 | INFO     | [job] validate thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:29,898 | INFO     | [job] control thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:30,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:35:07] 2026-01-10 14:34:34,388 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:35:07] 2026-01-10 14:34:58,044 | INFO     | PID=2765622 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:35:07] 2026-01-10 14:34:58,045 | INFO     | .. there are 10 such processes running
[2026-01-10 09:35:07] 2026-01-10 14:34:58,046 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:35:07] 2026-01-10 14:34:58,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:35:07] 2026-01-10 14:34:58,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:35:07] 2026-01-10 14:35:01,116 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:35:07] 2026-01-10 14:35:01,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367961552704)>', '<ExcThread(monitor, started 140367601047296)>']
[2026-01-10 09:35:07] 2026-01-10 14:35:02,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:35:07] 2026-01-10 14:35:02,072 | INFO     | [monitor] control thread has ended
[2026-01-10 09:35:07] 2026-01-10 14:35:06,636 | INFO     | all workflow threads have been joined
[2026-01-10 09:35:07] 2026-01-10 14:35:06,636 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:35:07] 2026-01-10 14:35:06,636 | INFO     | traces error code: 0
[2026-01-10 09:35:07] 2026-01-10 14:35:06,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:35:07] 2026-01-10 14:35:06,945 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:35:07] 2026-01-10 14:35:06,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:35:07] 2026-01-10 14:35:06,952 [wrapper] pilotpid: 2765622
[2026-01-10 09:35:07] 2026-01-10 14:35:06,955 [wrapper] Pilot exit status: 0
[2026-01-10 09:35:07] 2026-01-10 14:35:06,967 [wrapper] pandaids: 6965384091
[2026-01-10 09:35:07] 2026-01-10 14:35:07,039 [wrapper] cleanup supervisor_pilot 2859285 2765623
[2026-01-10 09:35:07] 2026-01-10 14:35:07,043 [wrapper] Test setup, not cleaning
[2026-01-10 09:35:07] 2026-01-10 14:35:07,046 [wrapper] apfmon messages muted
[2026-01-10 09:35:07] 2026-01-10 14:35:07,049 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:35:07] 2026-01-10 14:35:07,052 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:35:07]  *** Error codes and diagnostics ***
[2026-01-10 09:35:07]     "exeErrorCode": 0,
[2026-01-10 09:35:07]     "exeErrorDiag": "",
[2026-01-10 09:35:07]     "pilotErrorCode": 0,
[2026-01-10 09:35:07]     "pilotErrorDiag": "",
[2026-01-10 09:35:07]  *** Listing of results directory ***
[2026-01-10 09:35:07] total 434980
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:35:07] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:35:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:19 run_atlas
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:19 job.xml
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas 393525946 Jan 10 08:19 EVNT.47962006._000076.pool.root.1
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:19 start_atlas.sh
[2026-01-10 09:35:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:19 shared
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:19 input.tar.gz
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:19 boinc_lockfile
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:19 pandaJob.out
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas        57 Jan 10 08:19 setup.sh.local
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas    989556 Jan 10 08:20 agis_schedconf.cvmfs.json
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:35:07] drwx------. 5 boincer umatlas      4096 Jan 10 08:20 pilot3
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas      6905 Jan 10 09:27 init_data.xml
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:29 boinc_task_state.xml
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas  44341246 Jan 10 09:34 HITS.47962010._002232.pool.root.1
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas      1023 Jan 10 09:34 memory_monitor_summary.json
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas        95 Jan 10 09:34 pilot_heartbeat.json
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas   1196539 Jan 10 09:34 log.47962010._002232.job.log.tgz.1
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas      8533 Jan 10 09:34 heartbeat.json
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:34 wrapper_checkpoint.txt
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:34 boinc_mmap_file
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas      4824 Jan 10 09:35 pilotlog.txt
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas    620423 Jan 10 09:35 log.47962010._002232.job.log.1
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas       353 Jan 10 09:35 output.list
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:35 runtime_log
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas   1832960 Jan 10 09:35 result.tar.gz
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 09:35 runtime_log.err
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas       652 Jan 10 09:35 o0cKDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxpmKDmUhMu7m.diag
[2026-01-10 09:35:07] -rw-r--r--. 1 boincer umatlas     22049 Jan 10 09:35 stderr.txt
[2026-01-10 09:35:07] HITS file was successfully produced:
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas 44341246 Jan 10 09:34 shared/HITS.pool.root.1
[2026-01-10 09:35:07]  *** Contents of shared directory: ***
[2026-01-10 09:35:07] total 430000
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas 393525946 Jan 10 08:19 ATLAS.root_0
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:19 start_atlas.sh
[2026-01-10 09:35:07] -rw-r--r--. 2 boincer umatlas    592618 Jan 10 08:19 input.tar.gz
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas  44341246 Jan 10 09:34 HITS.pool.root.1
[2026-01-10 09:35:07] -rw-------. 1 boincer umatlas   1832960 Jan 10 09:35 result.tar.gz
09:35:08 (2757032): run_atlas exited; CPU time 11448.304081
09:35:08 (2757032): called boinc_finish(0)

</stderr_txt>
]]>

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