Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:10:23 (2588895): wrapper (7.7.26015): starting
15:10:23 (2588895): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 15:10:23] Arguments: --nthreads 8
[2026-01-10 15:10:23] Threads: 8
[2026-01-10 15:10:23] Checking for CVMFS
[2026-01-10 15:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 15:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 15:10:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 15:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 15:10:25] 2.13.3.0 7109 95289 603400 154990 0 355 20567068 21042177 16842 16776704 0 391374702 99.465 517727884 31699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 15:10:25] CVMFS is ok
[2026-01-10 15:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 15:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 15:10:25] Further information can be found at the LHC@home message board.
[2026-01-10 15:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 15:10:25] Checking for apptainer binary...
[2026-01-10 15:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 15:10:25] Running /usr/bin/apptainer --version
[2026-01-10 15:10:25] apptainer version 1.4.5-2.el9
[2026-01-10 15:10:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 15:10:26] c-16-11.aglt2.org
[2026-01-10 15:10:26] apptainer works
[2026-01-10 15:10:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 15:10:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 15:10:26] Starting ATLAS job with PandaID=6965384150
[2026-01-10 15:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:40:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:40:02] 2026-01-11 01:38:57,632 | INFO     | monitor loop #1042: job 0:6965384150 is in state 'finished'
[2026-01-10 20:40:02] 2026-01-11 01:38:57,632 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:40:02] 2026-01-11 01:38:59,366 | INFO     | time since job start (19662s) is within the limit (349056.0s)
[2026-01-10 20:40:02] 2026-01-11 01:39:00,138 | INFO     | monitor loop #1043: job 0:6965384150 is in state 'finished'
[2026-01-10 20:40:02] 2026-01-11 01:39:00,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:40:02] 2026-01-11 01:39:01,373 | INFO     | time since job start (19664s) is within the limit (349056.0s)
[2026-01-10 20:40:02] 2026-01-11 01:39:02,647 | INFO     | monitor loop #1044: job 0:6965384150 is in state 'finished'
[2026-01-10 20:40:02] 2026-01-11 01:39:02,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,382 | INFO     | time since job start (19666s) is within the limit (349056.0s)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,432 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 20:40:02] 2026-01-11 01:39:03,466 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0391999999997
[2026-01-10 20:40:02] 2026-01-11 01:39:03,481 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384150/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,493 | INFO     | extracted standard info from prmon json
[2026-01-10 20:40:02] 2026-01-11 01:39:03,493 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:40:02] 2026-01-11 01:39:03,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:40:02] 2026-01-11 01:39:03,515 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:40:02] 2026-01-11 01:39:03,516 | INFO     | sum of square deviations: 10065851245.73051
[2026-01-10 20:40:02] 2026-01-11 01:39:03,532 | INFO     | sum of deviations: 237948752866.97876
[2026-01-10 20:40:02] 2026-01-11 01:39:03,533 | INFO     | mean x: 1768085767.1285267
[2026-01-10 20:40:02] 2026-01-11 01:39:03,533 | INFO     | mean y: 2409024.4639498433
[2026-01-10 20:40:02] 2026-01-11 01:39:03,533 | INFO     | intersect: -41793738462.6685
[2026-01-10 20:40:02] 2026-01-11 01:39:03,534 | INFO     | chi2: 18.46763042787837
[2026-01-10 20:40:02] 2026-01-11 01:39:03,534 | INFO     | sum of square deviations: 9600221268.512718
[2026-01-10 20:40:02] 2026-01-11 01:39:03,538 | INFO     | sum of deviations: 329731480814.32837
[2026-01-10 20:40:02] 2026-01-11 01:39:03,538 | INFO     | mean x: 1768085614.678344
[2026-01-10 20:40:02] 2026-01-11 01:39:03,538 | INFO     | mean y: 2439092.092356688
[2026-01-10 20:40:02] 2026-01-11 01:39:03,538 | INFO     | intersect: -60724649547.68028
[2026-01-10 20:40:02] 2026-01-11 01:39:03,539 | INFO     | chi2: 15.215700473652296
[2026-01-10 20:40:02] 2026-01-11 01:39:03,539 | INFO     | current chi2=15.215700473652296 (change=17.608810003675533 %)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,539 | INFO     | right removable region: 313
[2026-01-10 20:40:02] 2026-01-11 01:39:03,540 | INFO     | sum of square deviations: 9599612488.51272
[2026-01-10 20:40:02] 2026-01-11 01:39:03,543 | INFO     | sum of deviations: 128669296182.26462
[2026-01-10 20:40:02] 2026-01-11 01:39:03,543 | INFO     | mean x: 1768085919.678344
[2026-01-10 20:40:02] 2026-01-11 01:39:03,543 | INFO     | mean y: 2444764.200636943
[2026-01-10 20:40:02] 2026-01-11 01:39:03,543 | INFO     | intersect: -23696258818.576084
[2026-01-10 20:40:02] 2026-01-11 01:39:03,544 | INFO     | chi2: 13.421550238378625
[2026-01-10 20:40:02] 2026-01-11 01:39:03,544 | INFO     | current chi2=13.421550238378625 (change=27.323917972076593 %)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,545 | INFO     | sum of square deviations: 9147978654.685986
[2026-01-10 20:40:02] 2026-01-11 01:39:03,548 | INFO     | sum of deviations: 37726224815.9481
[2026-01-10 20:40:02] 2026-01-11 01:39:03,548 | INFO     | mean x: 1768086072.2297735
[2026-01-10 20:40:02] 2026-01-11 01:39:03,548 | INFO     | mean y: 2475468.8317152103
[2026-01-10 20:40:02] 2026-01-11 01:39:03,548 | INFO     | intersect: -7289103925.127501
[2026-01-10 20:40:02] 2026-01-11 01:39:03,549 | INFO     | chi2: 10.09330977613476
[2026-01-10 20:40:02] 2026-01-11 01:39:03,549 | INFO     | current chi2=10.09330977613476 (change=24.797735009230422 %)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,549 | INFO     | left removable region: 20
[2026-01-10 20:40:02] 2026-01-11 01:39:03,550 | INFO     | sum of square deviations: 7798953120.279851
[2026-01-10 20:40:02] 2026-01-11 01:39:03,553 | INFO     | sum of deviations: -13608686470.068241
[2026-01-10 20:40:02] 2026-01-11 01:39:03,553 | INFO     | mean x: 1768086194.3993175
[2026-01-10 20:40:02] 2026-01-11 01:39:03,553 | INFO     | mean y: 2565584.6587030715
[2026-01-10 20:40:02] 2026-01-11 01:39:03,553 | INFO     | intersect: 3087765649.404449
[2026-01-10 20:40:02] 2026-01-11 01:39:03,554 | INFO     | chi2: 1.9823159492030393
[2026-01-10 20:40:02] 2026-01-11 01:39:03,554 | INFO     | current memory leak: -1.74 B/s (using 293 data points, chi2=1.98)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,555 | INFO     | could have reported an average CPU frequency of 2900 MHz (14 samples)
[2026-01-10 20:40:02] 2026-01-11 01:39:03,555 | INFO     | ..............................
[2026-01-10 20:40:02] 2026-01-11 01:39:03,555 | INFO     | . Timing measurements:
[2026-01-10 20:40:02] 2026-01-11 01:39:03,555 | INFO     | . get job = 0 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,555 | INFO     | . initial setup = 6 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | . payload setup = 71 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | . stage-in = 0 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | . payload execution = 19471 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | . stage-out = 3 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | . log creation = 1 s
[2026-01-10 20:40:02] 2026-01-11 01:39:03,556 | INFO     | ..............................
[2026-01-10 20:40:02] 2026-01-11 01:39:04,075 | INFO     | 
[2026-01-10 20:40:02] 2026-01-11 01:39:04,075 | INFO     | job summary report
[2026-01-10 20:40:02] 2026-01-11 01:39:04,075 | INFO     | --------------------------------------------------
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | PanDA job id: 6965384150
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | task id: 47962010
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | errors: (none)
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | pilot state: finished 
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | transexitcode: 0
[2026-01-10 20:40:02] 2026-01-11 01:39:04,076 | INFO     | exeerrorcode: 0
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | exeerrordiag: 
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | exitcode: 0
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | exitmsg: OK
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | cpuconsumptiontime: 29550 s
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | nevents: 50
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | neventsw: 0
[2026-01-10 20:40:02] 2026-01-11 01:39:04,077 | INFO     | pid: 2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | pgrp: 2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | corecount: 8
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | event service: False
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284454, 3: 2284653, 15: 2284653, 25: 2284943, 26: 2285099, 19547: 2318387, 19548: 2318386, 19553: 2327436, 19557: 2327492, 1959
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | --------------------------------------------------
[2026-01-10 20:40:02] 2026-01-11 01:39:04,078 | INFO     | 
[2026-01-10 20:40:02] 2026-01-11 01:39:04,079 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 20:40:02] 2026-01-11 01:39:04,262 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,263 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,263 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,270 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:40:02] 2026-01-11 01:39:04,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,270 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:40:02] 2026-01-11 01:39:04,271 | INFO     | job 6965384150 has completed (purged errors)
[2026-01-10 20:40:02] 2026-01-11 01:39:04,271 | INFO     | overall cleanup function is called
[2026-01-10 20:40:02] 2026-01-11 01:39:05,299 | INFO     | --- collectZombieJob: --- 10, [2610649]
[2026-01-10 20:40:02] 2026-01-11 01:39:05,299 | INFO     | zombie collector waiting for pid 2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:05,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:40:02] 2026-01-11 01:39:05,301 | INFO     | collected zombie processes
[2026-01-10 20:40:02] 2026-01-11 01:39:05,301 | INFO     | will attempt to kill all subprocesses of pid=2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:06,139 | INFO     | process IDs to be killed: [2610649] (in reverse order)
[2026-01-10 20:40:02] 2026-01-11 01:39:06,411 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:40:02] 2026-01-11 01:39:06,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:40:02] 2026-01-11 01:39:06,469 | INFO     | did not find any defunct processes belonging to 2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:06,546 | INFO     | did not find any defunct processes belonging to 2610649
[2026-01-10 20:40:02] 2026-01-11 01:39:06,546 | INFO     | ready for new job
[2026-01-10 20:40:02] 2026-01-11 01:39:06,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:40:02] 2026-01-11 01:39:06,558 | INFO     | ***************************************
[2026-01-10 20:40:02] 2026-01-11 01:39:06,559 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:40:02] 2026-01-11 01:39:06,559 | INFO     | ***************************************
[2026-01-10 20:40:02] 2026-01-11 01:39:06,559 | INFO     | 
[2026-01-10 20:40:02] 2026-01-11 01:39:06,569 | INFO     | architecture information:
[2026-01-10 20:40:02] 2026-01-11 01:39:06,581 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:40:02] 2026-01-11 01:39:06,657 | INFO     | cat /etc/os-release:
[2026-01-10 20:40:02] NAME="CentOS Linux"
[2026-01-10 20:40:02] VERSION="7 (Core)"
[2026-01-10 20:40:02] ID="centos"
[2026-01-10 20:40:02] ID_LIKE="rhel fedora"
[2026-01-10 20:40:02] VERSION_ID="7"
[2026-01-10 20:40:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:40:02] ANSI_COLOR="0;31"
[2026-01-10 20:40:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:40:02] HOME_URL="https://www.centos.org/"
[2026-01-10 20:40:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:40:02] 
[2026-01-10 20:40:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:40:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:40:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:40:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:40:02] 
[2026-01-10 20:40:02] 2026-01-11 01:39:06,657 | INFO     | ***************************************
[2026-01-10 20:40:02] 2026-01-11 01:39:07,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 20:40:02] 2026-01-11 01:39:07,229 | INFO     | sufficient remaining disk space (53614739456 B)
[2026-01-10 20:40:02] 2026-01-11 01:39:07,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:40:02] 2026-01-11 01:39:07,230 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:40:02] 2026-01-11 01:39:07,230 | INFO     | update_server=False
[2026-01-10 20:40:02] 2026-01-11 01:39:07,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:40:02] 2026-01-11 01:39:07,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:40:02] 2026-01-11 01:39:07,565 | INFO     | all data control threads have been joined
[2026-01-10 20:40:02] 2026-01-11 01:39:07,688 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 20:40:02] 2026-01-11 01:39:07,688 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 20:40:02] 2026-01-11 01:39:07,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:40:02] 2026-01-11 01:39:07,689 | INFO     | will abort loop
[2026-01-10 20:40:02] 2026-01-11 01:39:08,010 | INFO     | all job control threads have been joined
[2026-01-10 20:40:02] 2026-01-11 01:39:08,236 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,380 | INFO     | [job] validate thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,409 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,497 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,571 | INFO     | [data] control thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,641 | INFO     | all payload control threads have been joined
[2026-01-10 20:40:02] 2026-01-11 01:39:08,695 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,732 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:08,855 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:40:02] 2026-01-11 01:39:09,016 | INFO     | [job] control thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,202 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,239 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:40:02] 2026-01-11 01:39:09,502 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,580 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,647 | INFO     | [payload] control thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,692 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:09,861 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:13,363 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:40:02] 2026-01-11 01:39:37,240 | INFO     | PID=2595625 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:40:02] 2026-01-11 01:39:37,241 | INFO     | .. there are 27 such processes running
[2026-01-10 20:40:02] 2026-01-11 01:39:37,241 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:40:02] 2026-01-11 01:39:37,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:40:02] 2026-01-11 01:39:37,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:40:02] 2026-01-11 01:39:53,108 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:40:02] 2026-01-11 01:39:55,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234499417920)>', '<ExcThread(monitor, started 140233995691776)>']
[2026-01-10 20:40:02] 2026-01-11 01:39:55,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:40:02] 2026-01-11 01:39:55,359 | INFO     | [monitor] control thread has ended
[2026-01-10 20:40:02] 2026-01-11 01:40:00,042 | INFO     | all workflow threads have been joined
[2026-01-10 20:40:02] 2026-01-11 01:40:00,042 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:40:02] 2026-01-11 01:40:00,043 | INFO     | traces error code: 0
[2026-01-10 20:40:02] 2026-01-11 01:40:00,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:40:02] 2026-01-11 01:40:00,483 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:40:02] 2026-01-11 01:40:00,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:40:02] 2026-01-11 01:40:00,558 [wrapper] pilotpid: 2595625
[2026-01-10 20:40:02] 2026-01-11 01:40:00,613 [wrapper] Pilot exit status: 0
[2026-01-10 20:40:02] 2026-01-11 01:40:00,792 [wrapper] pandaids: 6965384150
[2026-01-10 20:40:02] 2026-01-11 01:40:01,475 [wrapper] cleanup supervisor_pilot 3701747 2595626
[2026-01-10 20:40:02] 2026-01-11 01:40:01,508 [wrapper] Test setup, not cleaning
[2026-01-10 20:40:02] 2026-01-11 01:40:01,551 [wrapper] apfmon messages muted
[2026-01-10 20:40:02] 2026-01-11 01:40:01,577 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:40:02] 2026-01-11 01:40:01,593 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:40:02]  *** Error codes and diagnostics ***
[2026-01-10 20:40:02]     "exeErrorCode": 0,
[2026-01-10 20:40:02]     "exeErrorDiag": "",
[2026-01-10 20:40:02]     "pilotErrorCode": 0,
[2026-01-10 20:40:02]     "pilotErrorDiag": "",
[2026-01-10 20:40:02]  *** Listing of results directory ***
[2026-01-10 20:40:02] total 435656
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 20:40:02] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:15 queuedata.json
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas       100 Jan 10 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:40:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 15:10 run_atlas
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas       105 Jan 10 15:10 job.xml
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas 392458857 Jan 10 15:10 EVNT.47962006._000084.pool.root.1
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 15:10 start_atlas.sh
[2026-01-10 20:40:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 15:10 shared
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 15:10 input.tar.gz
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas         0 Jan 10 15:10 boinc_lockfile
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 15:10 pandaJob.out
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas        57 Jan 10 15:10 setup.sh.local
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas    989540 Jan 10 15:11 agis_schedconf.cvmfs.json
[2026-01-10 20:40:02] drwx------. 5 boincer umatlas      4096 Jan 10 15:11 pilot3
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas       531 Jan 10 20:10 boinc_task_state.xml
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas      6524 Jan 10 20:27 init_data.xml
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas  42400858 Jan 10 20:38 HITS.47962010._002291.pool.root.1
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas      1040 Jan 10 20:38 memory_monitor_summary.json
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas   1516240 Jan 10 20:38 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas   1375854 Jan 10 20:38 log.47962010._002291.job.log.tgz.1
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas        95 Jan 10 20:38 pilot_heartbeat.json
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas      8578 Jan 10 20:39 heartbeat.json
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:39 boinc_mmap_file
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas        28 Jan 10 20:39 wrapper_checkpoint.txt
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas      5010 Jan 10 20:40 pilotlog.txt
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas   2293414 Jan 10 20:40 log.47962010._002291.job.log.1
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas       353 Jan 10 20:40 output.list
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:40 runtime_log
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas   3686400 Jan 10 20:40 result.tar.gz
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 20:40 runtime_log.err
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas       656 Jan 10 20:40 fc2KDmSyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKqmKDm7zaUDo.diag
[2026-01-10 20:40:02] -rw-r--r--. 1 boincer umatlas     21482 Jan 10 20:40 stderr.txt
[2026-01-10 20:40:02] HITS file was successfully produced:
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas 42400858 Jan 10 20:38 shared/HITS.pool.root.1
[2026-01-10 20:40:02]  *** Contents of shared directory: ***
[2026-01-10 20:40:02] total 428872
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas 392458857 Jan 10 15:10 ATLAS.root_0
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 15:10 start_atlas.sh
[2026-01-10 20:40:02] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 15:10 input.tar.gz
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas  42400858 Jan 10 20:38 HITS.pool.root.1
[2026-01-10 20:40:02] -rw-------. 1 boincer umatlas   3686400 Jan 10 20:40 result.tar.gz
20:40:23 (2588895): run_atlas exited; CPU time 30184.220378
20:40:23 (2588895): called boinc_finish(0)

</stderr_txt>
]]>

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