Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:27 (17413): wrapper (7.7.26015): starting
08:20:27 (17413): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:20:27] Arguments: --nthreads 8
[2026-01-10 08:20:27] Threads: 8
[2026-01-10 08:20:27] Checking for CVMFS
[2026-01-10 08:20:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:20:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:20:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:20:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:20:27] 2.11.2.0 2919 119321 120848 154981 0 1 19198664 20275200 1 130560 0 25990984 99.794 7660370 31204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:20:27] CVMFS is ok
[2026-01-10 08:20:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:20:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:20:27] Further information can be found at the LHC@home message board.
[2026-01-10 08:20:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:20:27] Checking for apptainer binary...
[2026-01-10 08:20:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:20:27] Running /usr/bin/apptainer --version
[2026-01-10 08:20:28] apptainer version 1.3.2-1.el7
[2026-01-10 08:20:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:20:29] c-204-17.aglt2.org
[2026-01-10 08:20:29] apptainer works
[2026-01-10 08:20:29] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:20:29] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:20:29] Starting ATLAS job with PandaID=6965383990
[2026-01-10 08:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:14:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:14:59]  lfn=log.47962010._002131.job.log.tgz.1
[2026-01-10 09:14:59]  mtime=0
[2026-01-10 09:14:59]  protocol_id=None
[2026-01-10 09:14:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:14:59]  replicas=None
[2026-01-10 09:14:59]  scope=mc16_13TeV
[2026-01-10 09:14:59]  status=None
[2026-01-10 09:14:59]  status_code=0
[2026-01-10 09:14:59]  storage_token=
[2026-01-10 09:14:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965383990/log.47962010._002131.job.log.tgz.1
[2026-01-10 09:14:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/4b/4a/log.47962010._002131.job.log.tgz.1
[2026-01-10 09:14:59]  workdir=None
[2026-01-10 09:14:59] ]
[2026-01-10 09:14:59] 2026-01-10 14:14:01,471 | INFO     | transferring file log.47962010._002131.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965383990/log.47962010._002131.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:14:59] 2026-01-10 14:14:01,471 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965383990/log.47962010._002131.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002131.job
[2026-01-10 09:14:59] 2026-01-10 14:14:01,500 | INFO     | adding to output.list: log.47962010._002131.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/4b/4a/log.47962010._002131.job.log.tgz.
[2026-01-10 09:14:59] 2026-01-10 14:14:01,501 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:14:59] 2026-01-10 14:14:01,501 | INFO     | summary of transferred files:
[2026-01-10 09:14:59] 2026-01-10 14:14:01,501 | INFO     |  -- lfn=log.47962010._002131.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:14:59] 2026-01-10 14:14:01,502 | INFO     | stage-out finished correctly
[2026-01-10 09:14:59] 2026-01-10 14:14:02,525 | INFO     | time since job start (3194s) is within the limit (349056.0s)
[2026-01-10 09:14:59] 2026-01-10 14:14:02,682 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:14:59] 2026-01-10 14:14:02,884 | INFO     | job 6965383990 has state=finished
[2026-01-10 09:14:59] 2026-01-10 14:14:02,884 | INFO     | preparing for final server update for job 6965383990 in state='finished'
[2026-01-10 09:14:59] 2026-01-10 14:14:02,885 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:14:59] 2026-01-10 14:14:02,885 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:14:59] 2026-01-10 14:14:02,885 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:14:59] 2026-01-10 14:14:02,886 | INFO     | job 6965383990 has finished - writing final server update
[2026-01-10 09:14:59] 2026-01-10 14:14:02,886 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:14:59] 2026-01-10 14:14:02,887 | INFO     | executing command: lscpu
[2026-01-10 09:14:59] 2026-01-10 14:14:02,915 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:14:59] 2026-01-10 14:14:03,471 | INFO     | monitor loop #243: job 0:6965383990 is in state 'finished'
[2026-01-10 09:14:59] 2026-01-10 14:14:03,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:59] 2026-01-10 14:14:04,531 | INFO     | time since job start (3196s) is within the limit (349056.0s)
[2026-01-10 09:14:59] 2026-01-10 14:14:05,975 | INFO     | monitor loop #244: job 0:6965383990 is in state 'finished'
[2026-01-10 09:14:59] 2026-01-10 14:14:05,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:59] 2026-01-10 14:14:06,536 | INFO     | time since job start (3198s) is within the limit (349056.0s)
[2026-01-10 09:14:59] 2026-01-10 14:14:08,479 | INFO     | monitor loop #245: job 0:6965383990 is in state 'finished'
[2026-01-10 09:14:59] 2026-01-10 14:14:08,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:14:59] 2026-01-10 14:14:08,541 | INFO     | time since job start (3200s) is within the limit (349056.0s)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,560 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:14:59] 2026-01-10 14:14:09,563 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-10 09:14:59] 2026-01-10 14:14:09,564 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383990/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,565 | INFO     | extracted standard info from prmon json
[2026-01-10 09:14:59] 2026-01-10 14:14:09,565 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:14:59] 2026-01-10 14:14:09,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:14:59] 2026-01-10 14:14:09,567 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:14:59] 2026-01-10 14:14:09,567 | INFO     | sum of square deviations: 28240324.80000001
[2026-01-10 09:14:59] 2026-01-10 14:14:09,567 | INFO     | sum of deviations: -1756858327.0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,568 | INFO     | mean x: 1768052929.2666667
[2026-01-10 09:14:59] 2026-01-10 14:14:09,568 | INFO     | mean y: 2637937.0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,568 | INFO     | intersect: 109994946218.06071
[2026-01-10 09:14:59] 2026-01-10 14:14:09,568 | INFO     | chi2: 0.3501862544246615
[2026-01-10 09:14:59] 2026-01-10 14:14:09,568 | INFO     | current memory leak: -62.21 B/s (using 45 data points, chi2=0.35)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | could have reported an average CPU frequency of 1819 MHz (5 samples)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | ..............................
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . Timing measurements:
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . get job = 0 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . initial setup = 2 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . payload setup = 11 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . stage-in = 0 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,569 | INFO     | . payload execution = 3160 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,570 | INFO     | . stage-out = 1 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,570 | INFO     | . log creation = 0 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,570 | INFO     | ..............................
[2026-01-10 09:14:59] 2026-01-10 14:14:09,659 | INFO     | 
[2026-01-10 09:14:59] 2026-01-10 14:14:09,659 | INFO     | job summary report
[2026-01-10 09:14:59] 2026-01-10 14:14:09,659 | INFO     | --------------------------------------------------
[2026-01-10 09:14:59] 2026-01-10 14:14:09,659 | INFO     | PanDA job id: 6965383990
[2026-01-10 09:14:59] 2026-01-10 14:14:09,659 | INFO     | task id: 47962010
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | errors: (none)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | pilot state: finished 
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | transexitcode: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | exeerrorcode: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,660 | INFO     | exeerrordiag: 
[2026-01-10 09:14:59] 2026-01-10 14:14:09,661 | INFO     | exitcode: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,661 | INFO     | exitmsg: OK
[2026-01-10 09:14:59] 2026-01-10 14:14:09,661 | INFO     | cpuconsumptiontime: 20575 s
[2026-01-10 09:14:59] 2026-01-10 14:14:09,661 | INFO     | nevents: 50
[2026-01-10 09:14:59] 2026-01-10 14:14:09,661 | INFO     | neventsw: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | pid: 27508
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | pgrp: 27508
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | corecount: 8
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | event service: False
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | sizes: {0: 2284569, 6: 2284831, 11: 2284859, 3174: 2311096, 3175: 2311095, 3176: 2320145, 3177: 2320329, 3184: 2320607}
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | --------------------------------------------------
[2026-01-10 09:14:59] 2026-01-10 14:14:09,662 | INFO     | 
[2026-01-10 09:14:59] 2026-01-10 14:14:09,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:14:59] 2026-01-10 14:14:09,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,693 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,696 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,696 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:14:59] 2026-01-10 14:14:09,697 | INFO     | job 6965383990 has completed (purged errors)
[2026-01-10 09:14:59] 2026-01-10 14:14:09,697 | INFO     | overall cleanup function is called
[2026-01-10 09:14:59] 2026-01-10 14:14:10,711 | INFO     | --- collectZombieJob: --- 10, [27508]
[2026-01-10 09:14:59] 2026-01-10 14:14:10,711 | INFO     | zombie collector waiting for pid 27508
[2026-01-10 09:14:59] 2026-01-10 14:14:10,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:14:59] 2026-01-10 14:14:10,712 | INFO     | collected zombie processes
[2026-01-10 09:14:59] 2026-01-10 14:14:10,712 | INFO     | will attempt to kill all subprocesses of pid=27508
[2026-01-10 09:14:59] 2026-01-10 14:14:10,805 | INFO     | process IDs to be killed: [27508] (in reverse order)
[2026-01-10 09:14:59] 2026-01-10 14:14:10,923 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:14:59] 2026-01-10 14:14:10,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:14:59] 2026-01-10 14:14:10,928 | INFO     | did not find any defunct processes belonging to 27508
[2026-01-10 09:14:59] 2026-01-10 14:14:10,932 | INFO     | did not find any defunct processes belonging to 27508
[2026-01-10 09:14:59] 2026-01-10 14:14:10,932 | INFO     | ready for new job
[2026-01-10 09:14:59] 2026-01-10 14:14:10,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:14:59] 2026-01-10 14:14:10,934 | INFO     | ***************************************
[2026-01-10 09:14:59] 2026-01-10 14:14:10,934 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:14:59] 2026-01-10 14:14:10,934 | INFO     | ***************************************
[2026-01-10 09:14:59] 2026-01-10 14:14:10,934 | INFO     | 
[2026-01-10 09:14:59] 2026-01-10 14:14:10,935 | INFO     | architecture information:
[2026-01-10 09:14:59] 2026-01-10 14:14:10,936 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:14:59] 2026-01-10 14:14:10,956 | INFO     | cat /etc/os-release:
[2026-01-10 09:14:59] NAME="CentOS Linux"
[2026-01-10 09:14:59] VERSION="7 (Core)"
[2026-01-10 09:14:59] ID="centos"
[2026-01-10 09:14:59] ID_LIKE="rhel fedora"
[2026-01-10 09:14:59] VERSION_ID="7"
[2026-01-10 09:14:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:14:59] ANSI_COLOR="0;31"
[2026-01-10 09:14:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:14:59] HOME_URL="https://www.centos.org/"
[2026-01-10 09:14:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:14:59] 
[2026-01-10 09:14:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:14:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:14:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:14:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:14:59] 
[2026-01-10 09:14:59] 2026-01-10 14:14:10,956 | INFO     | ***************************************
[2026-01-10 09:14:59] 2026-01-10 14:14:11,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:14:59] 2026-01-10 14:14:11,490 | INFO     | sufficient remaining disk space (18343788544 B)
[2026-01-10 09:14:59] 2026-01-10 14:14:11,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:14:59] 2026-01-10 14:14:11,490 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:14:59] 2026-01-10 14:14:11,491 | INFO     | update_server=False
[2026-01-10 09:14:59] 2026-01-10 14:14:11,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:14:59] 2026-01-10 14:14:11,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:14:59] 2026-01-10 14:14:11,556 | INFO     | all data control threads have been joined
[2026-01-10 09:14:59] 2026-01-10 14:14:11,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:14:59] 2026-01-10 14:14:11,986 | INFO     | aborting loop
[2026-01-10 09:14:59] 2026-01-10 14:14:12,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:14:59] 2026-01-10 14:14:12,155 | INFO     | all payload control threads have been joined
[2026-01-10 09:14:59] 2026-01-10 14:14:12,215 | INFO     | all job control threads have been joined
[2026-01-10 09:14:59] 2026-01-10 14:14:12,496 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:12,497 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:12,559 | INFO     | [data] control thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:12,696 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:12,798 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:12,992 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,010 | INFO     | [job] validate thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,116 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,161 | INFO     | [payload] control thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,217 | INFO     | [job] control thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:14:59] 2026-01-10 14:14:13,302 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,411 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:13,463 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:14,117 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:17,281 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:21,993 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:14:59] 2026-01-10 14:14:22,997 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:14:59] 2026-01-10 14:14:41,758 | INFO     | PID=21103 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:14:59] 2026-01-10 14:14:41,758 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:14:59] 2026-01-10 14:14:41,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:14:59] 2026-01-10 14:14:41,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:14:59] 2026-01-10 14:14:52,925 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:14:59] 2026-01-10 14:14:54,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648415278912)>', '<ExcThread(monitor, started 140647713445632)>']
[2026-01-10 09:14:59] 2026-01-10 14:14:54,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:14:59] 2026-01-10 14:14:54,807 | INFO     | [monitor] control thread has ended
[2026-01-10 09:14:59] 2026-01-10 14:14:59,358 | INFO     | all workflow threads have been joined
[2026-01-10 09:14:59] 2026-01-10 14:14:59,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:14:59] 2026-01-10 14:14:59,359 | INFO     | traces error code: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:59,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:14:59] 2026-01-10 14:14:59,462 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:14:59] 2026-01-10 14:14:59,467 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:14:59] 2026-01-10 14:14:59,471 [wrapper] pilotpid: 21103
[2026-01-10 09:14:59] 2026-01-10 14:14:59,476 [wrapper] Pilot exit status: 0
[2026-01-10 09:14:59] 2026-01-10 14:14:59,493 [wrapper] pandaids: 6965383990
[2026-01-10 09:14:59] 2026-01-10 14:14:59,539 [wrapper] cleanup supervisor_pilot 18858 21104
[2026-01-10 09:14:59] 2026-01-10 14:14:59,544 [wrapper] Test setup, not cleaning
[2026-01-10 09:14:59] 2026-01-10 14:14:59,549 [wrapper] apfmon messages muted
[2026-01-10 09:14:59] 2026-01-10 14:14:59,555 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:14:59] 2026-01-10 14:14:59,559 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:14:59]  *** Error codes and diagnostics ***
[2026-01-10 09:14:59]     "exeErrorCode": 0,
[2026-01-10 09:14:59]     "exeErrorDiag": "",
[2026-01-10 09:14:59]     "pilotErrorCode": 0,
[2026-01-10 09:14:59]     "pilotErrorDiag": "",
[2026-01-10 09:14:59]  *** Listing of results directory ***
[2026-01-10 09:14:59] total 432268
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:14:59] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:14:59] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:20 run_atlas
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:20 job.xml
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas 392203700 Jan 10 08:20 EVNT.47962006._000062.pool.root.1
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:14:59] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:20 shared
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas    592614 Jan 10 08:20 input.tar.gz
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:20 boinc_lockfile
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:20 pandaJob.out
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas        57 Jan 10 08:20 setup.sh.local
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas    989556 Jan 10 08:20 agis_schedconf.cvmfs.json
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas   1516240 Jan 10 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:14:59] drwx------ 5 boincer umatlas      4096 Jan 10 08:20 pilot3
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:04 boinc_task_state.xml
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas      5910 Jan 10 09:09 init_data.xml
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas  43178950 Jan 10 09:13 HITS.47962010._002131.pool.root.1
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas      1051 Jan 10 09:13 memory_monitor_summary.json
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas   1182600 Jan 10 09:14 log.47962010._002131.job.log.tgz.1
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas      8608 Jan 10 09:14 heartbeat.json
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas        95 Jan 10 09:14 pilot_heartbeat.json
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:14 boinc_mmap_file
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:14 wrapper_checkpoint.txt
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas      4818 Jan 10 09:14 pilotlog.txt
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas    491940 Jan 10 09:14 log.47962010._002131.job.log.1
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas       353 Jan 10 09:14 output.list
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:14 runtime_log
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas   1689600 Jan 10 09:14 result.tar.gz
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas       659 Jan 10 09:14 UN5NDmRyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJpmKDmEsqaYo.diag
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 09:14 runtime_log.err
[2026-01-10 09:14:59] -rw-r--r-- 1 boincer umatlas     21708 Jan 10 09:14 stderr.txt
[2026-01-10 09:14:59] HITS file was successfully produced:
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas 43178950 Jan 10 09:13 shared/HITS.pool.root.1
[2026-01-10 09:14:59]  *** Contents of shared directory: ***
[2026-01-10 09:14:59] total 427428
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas 392203700 Jan 10 08:20 ATLAS.root_0
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:14:59] -rw-r--r-- 2 boincer umatlas    592614 Jan 10 08:20 input.tar.gz
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas  43178950 Jan 10 09:13 HITS.pool.root.1
[2026-01-10 09:14:59] -rw------- 1 boincer umatlas   1689600 Jan 10 09:14 result.tar.gz
09:15:00 (17413): run_atlas exited; CPU time 20329.707877
09:15:00 (17413): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN