Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:20:59 (2180221): wrapper (7.7.26015): starting
16:20:59 (2180221): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 16:20:59] Arguments: --nthreads 12
[2026-01-11 16:20:59] Threads: 12
[2026-01-11 16:20:59] Checking for CVMFS
[2026-01-11 16:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 16:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 16:20:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 16:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 16:20:59] 2.13.3.0 36987 5925 103584 155021 2 59 35832488 46080001 922 130560 0 9553324 99.995 220945 24758 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-11 16:20:59] CVMFS is ok
[2026-01-11 16:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 16:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 16:20:59] Further information can be found at the LHC@home message board.
[2026-01-11 16:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 16:20:59] Checking for apptainer binary...
[2026-01-11 16:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 16:20:59] Running /usr/bin/apptainer --version
[2026-01-11 16:20:59] apptainer version 1.4.5-2.el9
[2026-01-11 16:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 16:20:59] minis01.farm.particle.cz
[2026-01-11 16:20:59] apptainer works
[2026-01-11 16:20:59] Set ATHENA_PROC_NUMBER=12
[2026-01-11 16:20:59] Set ATHENA_CORE_NUMBER=12
[2026-01-11 16:20:59] Starting ATLAS job with PandaID=6965384348
[2026-01-11 16:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:46:16]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:46:16]  protocol_id=None
[2026-01-11 16:46:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 16:46:16]  replicas=None
[2026-01-11 16:46:16]  scope=mc16_13TeV
[2026-01-11 16:46:16]  status=None
[2026-01-11 16:46:16]  status_code=0
[2026-01-11 16:46:16]  storage_token=
[2026-01-11 16:46:16]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6965384348/log.47962010._002484.job.log.tgz.1
[2026-01-11 16:46:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/82/64/log.47962010._002484.job.log.tgz.1
[2026-01-11 16:46:16]  workdir=None
[2026-01-11 16:46:16] ]
[2026-01-11 16:46:16] 2026-01-11 15:45:35,130 | INFO     | transferring file log.47962010._002484.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6965384348/log.47962010._002484.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-11 16:46:16] 2026-01-11 15:45:35,131 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6965384348/log.47962010._002484.job.log.tgz.1 /var/lib/boinc/slots/3/log.47962010._002484.job
[2026-01-11 16:46:16] 2026-01-11 15:45:35,149 | INFO     | adding to output.list: log.47962010._002484.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/82/64/log.47962010._002484.job.log.tgz.
[2026-01-11 16:46:16] 2026-01-11 15:45:35,150 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 16:46:16] 2026-01-11 15:45:35,150 | INFO     | summary of transferred files:
[2026-01-11 16:46:16] 2026-01-11 15:45:35,150 | INFO     |  -- lfn=log.47962010._002484.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 16:46:16] 2026-01-11 15:45:35,150 | INFO     | stage-out finished correctly
[2026-01-11 16:46:16] 2026-01-11 15:45:36,908 | INFO     | time since job start (1468s) is within the limit (349056.0s)
[2026-01-11 16:46:16] 2026-01-11 15:45:37,456 | INFO     | monitor loop #114: job 0:6965384348 is in state 'finished'
[2026-01-11 16:46:16] 2026-01-11 15:45:37,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:46:16] 2026-01-11 15:45:38,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 16:46:16] 2026-01-11 15:45:38,913 | INFO     | time since job start (1470s) is within the limit (349056.0s)
[2026-01-11 16:46:16] 2026-01-11 15:45:39,964 | INFO     | monitor loop #115: job 0:6965384348 is in state 'finished'
[2026-01-11 16:46:16] 2026-01-11 15:45:39,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:46:16] 2026-01-11 15:45:40,093 | INFO     | PID=2184123 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 16:46:16] 2026-01-11 15:45:40,093 | INFO     | .. there are 2 such processes running
[2026-01-11 16:46:16] 2026-01-11 15:45:40,805 | INFO     | job 6965384348 has state=finished
[2026-01-11 16:46:16] 2026-01-11 15:45:40,806 | INFO     | preparing for final server update for job 6965384348 in state='finished'
[2026-01-11 16:46:16] 2026-01-11 15:45:40,806 | INFO     | this job has now completed (state=finished)
[2026-01-11 16:46:16] 2026-01-11 15:45:40,806 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 16:46:16] 2026-01-11 15:45:40,807 | INFO     | log transfer has been attempted: DONE
[2026-01-11 16:46:16] 2026-01-11 15:45:40,807 | INFO     | job 6965384348 has finished - writing final server update
[2026-01-11 16:46:16] 2026-01-11 15:45:40,807 | INFO     | total number of processed events: 50 (read)
[2026-01-11 16:46:16] 2026-01-11 15:45:40,808 | INFO     | executing command: lscpu
[2026-01-11 16:46:16] 2026-01-11 15:45:40,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 16:46:16] 2026-01-11 15:45:41,093 | INFO     | time since job start (1473s) is within the limit (349056.0s)
[2026-01-11 16:46:16] 2026-01-11 15:45:42,467 | INFO     | monitor loop #116: job 0:6965384348 is in state 'finished'
[2026-01-11 16:46:16] 2026-01-11 15:45:42,467 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:46:16] 2026-01-11 15:45:43,099 | INFO     | time since job start (1475s) is within the limit (349056.0s)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,430 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 16:46:16] 2026-01-11 15:45:44,437 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 2715.4861562499996
[2026-01-11 16:46:16] 2026-01-11 15:45:44,444 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6965384348/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,444 | INFO     | extracted standard info from prmon json
[2026-01-11 16:46:16] 2026-01-11 15:45:44,445 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:46:16] 2026-01-11 15:45:44,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:46:16] 2026-01-11 15:45:44,446 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:46:16] 2026-01-11 15:45:44,446 | INFO     | sum of square deviations: 1515608.4705882352
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | sum of deviations: -519738567.35294116
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | mean x: 1768145686.8235295
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | mean y: 3164077.882352941
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | intersect: 606342811799.8782
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | chi2: 0.13920110684021386
[2026-01-11 16:46:16] 2026-01-11 15:45:44,447 | INFO     | current memory leak: -342.92 B/s (using 17 data points, chi2=0.14)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,448 | INFO     | could have reported an average CPU frequency of 2761 MHz (4 samples)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,448 | INFO     | ..............................
[2026-01-11 16:46:16] 2026-01-11 15:45:44,448 | INFO     | . Timing measurements:
[2026-01-11 16:46:16] 2026-01-11 15:45:44,448 | INFO     | . get job = 0 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . initial setup = 1 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . payload setup = 5 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . stage-in = 0 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . payload execution = 1442 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . stage-out = 0 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | . log creation = 0 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,449 | INFO     | ..............................
[2026-01-11 16:46:16] 2026-01-11 15:45:44,523 | INFO     | 
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | job summary report
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | --------------------------------------------------
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | PanDA job id: 6965384348
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | task id: 47962010
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | errors: (none)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | pilot state: finished 
[2026-01-11 16:46:16] 2026-01-11 15:45:44,524 | INFO     | transexitcode: 0
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | exeerrorcode: 0
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | exeerrordiag: 
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | exitcode: 0
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | exitmsg: OK
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | cpuconsumptiontime: 13182 s
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | nevents: 50
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | neventsw: 0
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | pid: 2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | pgrp: 2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:44,525 | INFO     | corecount: 12
[2026-01-11 16:46:16] 2026-01-11 15:45:44,526 | INFO     | event service: False
[2026-01-11 16:46:16] 2026-01-11 15:45:44,526 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 1451: 2310316, 1452: 2319310, 1455: 2319366, 1461: 2319740}
[2026-01-11 16:46:16] 2026-01-11 15:45:44,526 | INFO     | --------------------------------------------------
[2026-01-11 16:46:16] 2026-01-11 15:45:44,526 | INFO     | 
[2026-01-11 16:46:16] 2026-01-11 15:45:44,526 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-11 16:46:16] 2026-01-11 15:45:44,545 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,547 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,548 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:46:16] 2026-01-11 15:45:44,548 | INFO     | job 6965384348 has completed (purged errors)
[2026-01-11 16:46:16] 2026-01-11 15:45:44,548 | INFO     | overall cleanup function is called
[2026-01-11 16:46:16] 2026-01-11 15:45:45,569 | INFO     | --- collectZombieJob: --- 10, [2191060]
[2026-01-11 16:46:16] 2026-01-11 15:45:45,569 | INFO     | zombie collector waiting for pid 2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:45,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:46:16] 2026-01-11 15:45:45,570 | INFO     | collected zombie processes
[2026-01-11 16:46:16] 2026-01-11 15:45:45,570 | INFO     | will attempt to kill all subprocesses of pid=2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:45,703 | INFO     | process IDs to be killed: [2191060] (in reverse order)
[2026-01-11 16:46:16] 2026-01-11 15:45:45,753 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:46:16] 2026-01-11 15:45:45,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:46:16] 2026-01-11 15:45:45,759 | INFO     | did not find any defunct processes belonging to 2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:45,763 | INFO     | did not find any defunct processes belonging to 2191060
[2026-01-11 16:46:16] 2026-01-11 15:45:45,763 | INFO     | ready for new job
[2026-01-11 16:46:16] 2026-01-11 15:45:45,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:46:16] 2026-01-11 15:45:45,764 | INFO     | ***************************************
[2026-01-11 16:46:16] 2026-01-11 15:45:45,765 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:46:16] 2026-01-11 15:45:45,765 | INFO     | ***************************************
[2026-01-11 16:46:16] 2026-01-11 15:45:45,765 | INFO     | 
[2026-01-11 16:46:16] 2026-01-11 15:45:45,766 | INFO     | architecture information:
[2026-01-11 16:46:16] 2026-01-11 15:45:45,767 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:46:16] 2026-01-11 15:45:45,779 | INFO     | cat /etc/os-release:
[2026-01-11 16:46:16] NAME="CentOS Linux"
[2026-01-11 16:46:16] VERSION="7 (Core)"
[2026-01-11 16:46:16] ID="centos"
[2026-01-11 16:46:16] ID_LIKE="rhel fedora"
[2026-01-11 16:46:16] VERSION_ID="7"
[2026-01-11 16:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:46:16] ANSI_COLOR="0;31"
[2026-01-11 16:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:46:16] HOME_URL="https://www.centos.org/"
[2026-01-11 16:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:46:16] 
[2026-01-11 16:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:46:16] 
[2026-01-11 16:46:16] 2026-01-11 15:45:45,780 | INFO     | ***************************************
[2026-01-11 16:46:16] 2026-01-11 15:45:46,283 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-11 16:46:16] 2026-01-11 15:45:46,298 | INFO     | sufficient remaining disk space (71428997120 B)
[2026-01-11 16:46:16] 2026-01-11 15:45:46,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:46:16] 2026-01-11 15:45:46,298 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:46:16] 2026-01-11 15:45:46,298 | INFO     | update_server=False
[2026-01-11 16:46:16] 2026-01-11 15:45:46,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:46:16] 2026-01-11 15:45:46,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:46:16] 2026-01-11 15:45:46,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:46:16] 2026-01-11 15:45:46,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:46:16] 2026-01-11 15:45:46,299 | INFO     | aborting loop
[2026-01-11 16:46:16] 2026-01-11 15:45:46,534 | INFO     | all job control threads have been joined
[2026-01-11 16:46:16] 2026-01-11 15:45:46,967 | INFO     | all payload control threads have been joined
[2026-01-11 16:46:16] 2026-01-11 15:45:46,997 | INFO     | all data control threads have been joined
[2026-01-11 16:46:16] 2026-01-11 15:45:47,304 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,305 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,305 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,313 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,540 | INFO     | [job] control thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,848 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:47,973 | INFO     | [payload] control thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,003 | INFO     | [data] control thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,095 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,192 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,203 | INFO     | [job] validate thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,302 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,302 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,469 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,606 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:45:48,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:46:16] 2026-01-11 15:45:52,992 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:46:16] 2026-01-11 15:46:09,945 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:46:16] 2026-01-11 15:46:10,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932591736640)>', '<ExcThread(monitor, started 139932207130368)>']
[2026-01-11 16:46:16] 2026-01-11 15:46:15,449 | INFO     | all workflow threads have been joined
[2026-01-11 16:46:16] 2026-01-11 15:46:15,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:46:16] 2026-01-11 15:46:15,450 | INFO     | traces error code: 0
[2026-01-11 16:46:16] 2026-01-11 15:46:15,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:46:16] 2026-01-11 15:46:16,352 | INFO     | PID=2184123 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 16:46:16] 2026-01-11 15:46:16,352 | INFO     | .. there are 2 such processes running
[2026-01-11 16:46:16] 2026-01-11 15:46:16,352 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:46:16] 2026-01-11 15:46:16,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:46:16] 2026-01-11 15:46:16,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:46:16] 2026-01-11 15:46:16,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:46:16] 2026-01-11 15:46:16,353 | INFO     | [monitor] control thread has ended
[2026-01-11 16:46:16] 2026-01-11 15:46:16,461 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:46:16] 2026-01-11 15:46:16,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:46:16] 2026-01-11 15:46:16,467 [wrapper] pilotpid: 2184123
[2026-01-11 16:46:16] 2026-01-11 15:46:16,469 [wrapper] Pilot exit status: 0
[2026-01-11 16:46:16] 2026-01-11 15:46:16,488 [wrapper] pandaids: 6965384348
[2026-01-11 16:46:16] 2026-01-11 15:46:16,525 [wrapper] cleanup supervisor_pilot 2206102 2184124
[2026-01-11 16:46:16] 2026-01-11 15:46:16,528 [wrapper] Test setup, not cleaning
[2026-01-11 16:46:16] 2026-01-11 15:46:16,530 [wrapper] apfmon messages muted
[2026-01-11 16:46:16] 2026-01-11 15:46:16,533 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:46:16] 2026-01-11 15:46:16,536 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:46:16]  *** Error codes and diagnostics ***
[2026-01-11 16:46:16]     "exeErrorCode": 0,
[2026-01-11 16:46:16]     "exeErrorDiag": "",
[2026-01-11 16:46:16]     "pilotErrorCode": 0,
[2026-01-11 16:46:16]     "pilotErrorDiag": "",
[2026-01-11 16:46:16]  *** Listing of results directory ***
[2026-01-11 16:46:16] total 437608
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:13 queuedata.json
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-11 16:46:16] -rwx------. 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc       100 Jan 11 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:46:16] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 16:20 run_atlas
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc       105 Jan 11 16:20 job.xml
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc 391896450 Jan 11 16:20 EVNT.47962006._000020.pool.root.1
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc      6523 Jan 11 16:20 init_data.xml
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc     15847 Jan 11 16:20 start_atlas.sh
[2026-01-11 16:46:16] drwxrwx--x. 2 boinc boinc      4096 Jan 11 16:20 shared
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc    592615 Jan 11 16:20 input.tar.gz
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc         0 Jan 11 16:20 boinc_lockfile
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc      2890 Jan 11 16:20 pandaJob.out
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc    989556 Jan 11 16:21 agis_schedconf.cvmfs.json
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc   1516240 Jan 11 16:21 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:46:16] drwx------. 5 boinc boinc      4096 Jan 11 16:21 pilot3
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc       529 Jan 11 16:39 boinc_task_state.xml
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc  48635901 Jan 11 16:45 HITS.47962010._002484.pool.root.1
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc        95 Jan 11 16:45 pilot_heartbeat.json
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc      1013 Jan 11 16:45 memory_monitor_summary.json
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc   1571149 Jan 11 16:45 log.47962010._002484.job.log.tgz.1
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc      8552 Jan 11 16:45 heartbeat.json
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc      8192 Jan 11 16:46 boinc_mmap_file
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc        27 Jan 11 16:46 wrapper_checkpoint.txt
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc       822 Jan 11 16:46 pilotlog.txt
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc    263643 Jan 11 16:46 log.47962010._002484.job.log.1
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc       353 Jan 11 16:46 output.list
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc       620 Jan 11 16:46 runtime_log
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc   1853440 Jan 11 16:46 result.tar.gz
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc       661 Jan 11 16:46 wiSLDmSyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWZhKDm06Oa2n.diag
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc      8864 Jan 11 16:46 runtime_log.err
[2026-01-11 16:46:16] -rw-r--r--. 1 boinc boinc     21996 Jan 11 16:46 stderr.txt
[2026-01-11 16:46:16] HITS file was successfully produced:
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc 48635901 Jan 11 16:45 shared/HITS.pool.root.1
[2026-01-11 16:46:16]  *** Contents of shared directory: ***
[2026-01-11 16:46:16] total 432620
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc 391896450 Jan 11 16:20 ATLAS.root_0
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc     15847 Jan 11 16:20 start_atlas.sh
[2026-01-11 16:46:16] -rw-r--r--. 2 boinc boinc    592615 Jan 11 16:20 input.tar.gz
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc  48635901 Jan 11 16:45 HITS.pool.root.1
[2026-01-11 16:46:16] -rw-------. 1 boinc boinc   1853440 Jan 11 16:46 result.tar.gz
16:46:18 (2180221): run_atlas exited; CPU time 13137.358876
16:46:18 (2180221): called boinc_finish(0)

</stderr_txt>
]]>

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