Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:07 (3029666): wrapper (7.7.26015): starting
08:22:07 (3029666): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:22:07] Arguments: --nthreads 9
[2026-01-10 08:22:07] Threads: 9
[2026-01-10 08:22:07] Checking for CVMFS
[2026-01-10 08:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:22:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:22:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:22:08] 2.13.3.0 1684472 18366 180328 154981 0 54 28965010 40960000 9155 16776704 0 22038427 99.687 17170552 42110 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:22:08] CVMFS is ok
[2026-01-10 08:22:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:22:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:22:08] Further information can be found at the LHC@home message board.
[2026-01-10 08:22:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:22:08] Checking for apptainer binary...
[2026-01-10 08:22:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:22:08] Running /usr/bin/apptainer --version
[2026-01-10 08:22:08] apptainer version 1.4.5-2.el9
[2026-01-10 08:22:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:22:09] c-206-36.aglt2.org
[2026-01-10 08:22:09] apptainer works
[2026-01-10 08:22:09] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:22:09] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:22:09] Starting ATLAS job with PandaID=6965384340
[2026-01-10 08:22:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:50:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:50:48] 2026-01-10 14:49:59,103 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:50:48] 2026-01-10 14:49:59,103 | INFO     | summary of transferred files:
[2026-01-10 09:50:48] 2026-01-10 14:49:59,104 | INFO     |  -- lfn=log.47962010._002476.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:50:48] 2026-01-10 14:49:59,104 | INFO     | stage-out finished correctly
[2026-01-10 09:50:48] 2026-01-10 14:49:59,856 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:50:48] 2026-01-10 14:50:00,047 | WARNING  | process 3051168 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:50:48] 2026-01-10 14:50:00,047 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384340/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:48] 2026-01-10 14:50:00,102 | INFO     | time since job start (5205s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:00,498 | INFO     | number of running child processes to parent process 3051168: 1
[2026-01-10 09:50:48] 2026-01-10 14:50:00,499 | INFO     | maximum number of monitored processes: 17
[2026-01-10 09:50:48] 2026-01-10 14:50:00,882 | INFO     | job 6965384340 has state=finished
[2026-01-10 09:50:48] 2026-01-10 14:50:00,888 | INFO     | preparing for final server update for job 6965384340 in state='finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:00,888 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:50:48] 2026-01-10 14:50:00,888 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:50:48] 2026-01-10 14:50:00,888 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:50:48] 2026-01-10 14:50:00,889 | INFO     | job 6965384340 has finished - writing final server update
[2026-01-10 09:50:48] 2026-01-10 14:50:00,889 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:50:48] 2026-01-10 14:50:00,891 | INFO     | executing command: lscpu
[2026-01-10 09:50:48] 2026-01-10 14:50:00,949 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:50:48] 2026-01-10 14:50:02,124 | INFO     | time since job start (5207s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:03,005 | INFO     | monitor loop #356: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:03,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:04,133 | INFO     | time since job start (5209s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:05,510 | INFO     | monitor loop #357: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:05,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:05,617 | INFO     | PID=3037448 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:48] 2026-01-10 14:50:05,617 | INFO     | .. there are 10 such processes running
[2026-01-10 09:50:48] 2026-01-10 14:50:06,618 | INFO     | time since job start (5211s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:08,015 | INFO     | monitor loop #358: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:08,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:08,627 | INFO     | time since job start (5213s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:10,520 | INFO     | monitor loop #359: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:10,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:10,634 | INFO     | time since job start (5215s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:12,642 | INFO     | time since job start (5217s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:13,025 | INFO     | monitor loop #360: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:13,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:14,650 | INFO     | time since job start (5219s) is within the limit (349056.0s)
[2026-01-10 09:50:48] 2026-01-10 14:50:15,533 | INFO     | monitor loop #361: job 0:6965384340 is in state 'finished'
[2026-01-10 09:50:48] 2026-01-10 14:50:15,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:48] 2026-01-10 14:50:15,888 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:50:48] 2026-01-10 14:50:15,922 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3267.820531250001
[2026-01-10 09:50:48] 2026-01-10 14:50:15,992 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384340/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:48] 2026-01-10 14:50:15,992 | INFO     | extracted standard info from prmon json
[2026-01-10 09:50:48] 2026-01-10 14:50:15,992 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:50:48] 2026-01-10 14:50:15,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:50:48] 2026-01-10 14:50:16,028 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:50:48] 2026-01-10 14:50:16,028 | INFO     | sum of square deviations: 136062776.03947344
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | sum of deviations: -69256774.02631688
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | mean x: 1768054141.3026316
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | mean y: 2702272.1315789474
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | intersect: 902652498.7458439
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | chi2: 0.2898883667908784
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | current memory leak: -0.51 B/s (using 76 data points, chi2=0.29)
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | could have reported an average CPU frequency of 3266 MHz (6 samples)
[2026-01-10 09:50:48] 2026-01-10 14:50:16,029 | INFO     | ..............................
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . Timing measurements:
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . get job = 0 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . initial setup = 2 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . payload setup = 54 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . stage-in = 0 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . payload execution = 5074 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . stage-out = 4 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | . log creation = 1 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,030 | INFO     | ..............................
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | 
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | job summary report
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | --------------------------------------------------
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | PanDA job id: 6965384340
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | task id: 47962010
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | errors: (none)
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | pilot state: finished 
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | transexitcode: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | exeerrorcode: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | exeerrordiag: 
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | exitcode: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:16,155 | INFO     | exitmsg: OK
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | cpuconsumptiontime: 12166 s
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | nevents: 50
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | neventsw: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | pid: 3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | pgrp: 3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | corecount: 9
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | event service: False
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | sizes: {0: 2284398, 1: 2284597, 12: 2284597, 23: 2284625, 31: 2284915, 34: 2284943, 5133: 2312153, 5134: 2312152, 5139: 2321202, 5140: 2321258, 5156: 2321504}
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | --------------------------------------------------
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | 
[2026-01-10 09:50:48] 2026-01-10 14:50:16,156 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:50:48] 2026-01-10 14:50:16,183 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,183 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | job 6965384340 has completed (purged errors)
[2026-01-10 09:50:48] 2026-01-10 14:50:16,185 | INFO     | overall cleanup function is called
[2026-01-10 09:50:48] 2026-01-10 14:50:17,201 | INFO     | --- collectZombieJob: --- 10, [3051168]
[2026-01-10 09:50:48] 2026-01-10 14:50:17,202 | INFO     | zombie collector waiting for pid 3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:17,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:50:48] 2026-01-10 14:50:17,202 | INFO     | collected zombie processes
[2026-01-10 09:50:48] 2026-01-10 14:50:17,202 | INFO     | will attempt to kill all subprocesses of pid=3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:17,610 | INFO     | process IDs to be killed: [3051168] (in reverse order)
[2026-01-10 09:50:48] 2026-01-10 14:50:17,745 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:50:48] 2026-01-10 14:50:17,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:50:48] 2026-01-10 14:50:17,756 | INFO     | did not find any defunct processes belonging to 3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:17,767 | INFO     | did not find any defunct processes belonging to 3051168
[2026-01-10 09:50:48] 2026-01-10 14:50:17,767 | INFO     | ready for new job
[2026-01-10 09:50:48] 2026-01-10 14:50:17,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:50:48] 2026-01-10 14:50:17,769 | INFO     | ***************************************
[2026-01-10 09:50:48] 2026-01-10 14:50:17,769 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:50:48] 2026-01-10 14:50:17,769 | INFO     | ***************************************
[2026-01-10 09:50:48] 2026-01-10 14:50:17,769 | INFO     | 
[2026-01-10 09:50:48] 2026-01-10 14:50:17,773 | INFO     | architecture information:
[2026-01-10 09:50:48] 2026-01-10 14:50:17,773 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:50:48] 2026-01-10 14:50:17,888 | INFO     | cat /etc/os-release:
[2026-01-10 09:50:48] NAME="CentOS Linux"
[2026-01-10 09:50:48] VERSION="7 (Core)"
[2026-01-10 09:50:48] ID="centos"
[2026-01-10 09:50:48] ID_LIKE="rhel fedora"
[2026-01-10 09:50:48] VERSION_ID="7"
[2026-01-10 09:50:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:50:48] ANSI_COLOR="0;31"
[2026-01-10 09:50:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:50:48] HOME_URL="https://www.centos.org/"
[2026-01-10 09:50:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:50:48] 
[2026-01-10 09:50:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:50:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:50:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:50:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:50:48] 
[2026-01-10 09:50:48] 2026-01-10 14:50:17,889 | INFO     | ***************************************
[2026-01-10 09:50:48] 2026-01-10 14:50:18,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:50:48] 2026-01-10 14:50:18,493 | INFO     | sufficient remaining disk space (85032173568 B)
[2026-01-10 09:50:48] 2026-01-10 14:50:18,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:50:48] 2026-01-10 14:50:18,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:50:48] 2026-01-10 14:50:18,494 | INFO     | update_server=False
[2026-01-10 09:50:48] 2026-01-10 14:50:18,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:50:48] 2026-01-10 14:50:18,549 | INFO     | all data control threads have been joined
[2026-01-10 09:50:48] 2026-01-10 14:50:18,712 | INFO     | all job control threads have been joined
[2026-01-10 09:50:48] 2026-01-10 14:50:19,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:48] 2026-01-10 14:50:19,045 | INFO     | aborting loop
[2026-01-10 09:50:48] 2026-01-10 14:50:19,140 | INFO     | all payload control threads have been joined
[2026-01-10 09:50:48] 2026-01-10 14:50:19,494 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,554 | INFO     | [data] control thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:50:48] 2026-01-10 14:50:19,717 | INFO     | [job] control thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,733 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,740 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,918 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:19,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:50:48] 2026-01-10 14:50:20,049 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,144 | INFO     | [payload] control thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,885 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,936 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,986 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,986 | INFO     | [job] validate thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:20,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:21,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:48] 2026-01-10 14:50:21,942 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:22,175 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:23,689 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:50:48] 2026-01-10 14:50:24,699 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:50:48] 2026-01-10 14:50:24,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464328136512)>', '<ExcThread(monitor, started 140463818405632)>']
[2026-01-10 09:50:48] 2026-01-10 14:50:29,987 | INFO     | all workflow threads have been joined
[2026-01-10 09:50:48] 2026-01-10 14:50:29,988 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:50:48] 2026-01-10 14:50:29,988 | INFO     | traces error code: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:29,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:50:48] 2026-01-10 14:50:48,086 | INFO     | PID=3037448 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:48] 2026-01-10 14:50:48,086 | INFO     | .. there are 10 such processes running
[2026-01-10 09:50:48] 2026-01-10 14:50:48,087 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:50:48] 2026-01-10 14:50:48,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:50:48] 2026-01-10 14:50:48,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:50:48] 2026-01-10 14:50:48,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:50:48] 2026-01-10 14:50:48,087 | INFO     | [monitor] control thread has ended
[2026-01-10 09:50:48] 2026-01-10 14:50:48,204 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:50:48] 2026-01-10 14:50:48,207 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:50:48] 2026-01-10 14:50:48,209 [wrapper] pilotpid: 3037448
[2026-01-10 09:50:48] 2026-01-10 14:50:48,211 [wrapper] Pilot exit status: 0
[2026-01-10 09:50:48] 2026-01-10 14:50:48,276 [wrapper] pandaids: 6965384340
[2026-01-10 09:50:48] 2026-01-10 14:50:48,380 [wrapper] cleanup supervisor_pilot 3167402 3037449
[2026-01-10 09:50:48] 2026-01-10 14:50:48,393 [wrapper] Test setup, not cleaning
[2026-01-10 09:50:48] 2026-01-10 14:50:48,395 [wrapper] apfmon messages muted
[2026-01-10 09:50:48] 2026-01-10 14:50:48,398 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:50:48] 2026-01-10 14:50:48,400 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:50:48]  *** Error codes and diagnostics ***
[2026-01-10 09:50:48]     "exeErrorCode": 0,
[2026-01-10 09:50:48]     "exeErrorDiag": "",
[2026-01-10 09:50:48]     "pilotErrorCode": 0,
[2026-01-10 09:50:48]     "pilotErrorDiag": "",
[2026-01-10 09:50:48]  *** Listing of results directory ***
[2026-01-10 09:50:48] total 435648
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:50:48] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:50:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:22 run_atlas
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:22 job.xml
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas 392887092 Jan 10 08:22 EVNT.47962006._000016.pool.root.1
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:50:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:22 shared
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:22 input.tar.gz
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:22 boinc_lockfile
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:22 pandaJob.out
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas        57 Jan 10 08:22 setup.sh.local
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas    989556 Jan 10 08:23 agis_schedconf.cvmfs.json
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:50:48] drwx------. 5 boincer umatlas      4096 Jan 10 08:23 pilot3
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:40 boinc_task_state.xml
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas      6905 Jan 10 09:49 init_data.xml
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas  45229257 Jan 10 09:49 HITS.47962010._002476.pool.root.1
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas      1024 Jan 10 09:49 memory_monitor_summary.json
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas   1312974 Jan 10 09:49 log.47962010._002476.job.log.tgz.1
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas      8536 Jan 10 09:50 heartbeat.json
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:50 boinc_mmap_file
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:50 wrapper_checkpoint.txt
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas       823 Jan 10 09:50 pilotlog.txt
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas        95 Jan 10 09:50 pilot_heartbeat.json
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas    720615 Jan 10 09:50 log.47962010._002476.job.log.1
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas       353 Jan 10 09:50 output.list
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:50 runtime_log
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas   2058240 Jan 10 09:50 result.tar.gz
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 09:50 runtime_log.err
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas       653 Jan 10 09:50 57PLDmSyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUZhKDmsVWRim.diag
[2026-01-10 09:50:48] -rw-r--r--. 1 boincer umatlas     22462 Jan 10 09:50 stderr.txt
[2026-01-10 09:50:48] HITS file was successfully produced:
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas 45229257 Jan 10 09:49 shared/HITS.pool.root.1
[2026-01-10 09:50:48]  *** Contents of shared directory: ***
[2026-01-10 09:50:48] total 430464
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas 392887092 Jan 10 08:22 ATLAS.root_0
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:22 start_atlas.sh
[2026-01-10 09:50:48] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:22 input.tar.gz
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas  45229257 Jan 10 09:49 HITS.pool.root.1
[2026-01-10 09:50:48] -rw-------. 1 boincer umatlas   2058240 Jan 10 09:50 result.tar.gz
09:50:49 (3029666): run_atlas exited; CPU time 12149.910481
09:50:49 (3029666): called boinc_finish(0)

</stderr_txt>
]]>

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