Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:02:22 (629404): wrapper (7.7.26015): starting
10:02:22 (629404): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 10:02:22] Arguments: --nthreads 4
[2026-01-11 10:02:22] Threads: 4
[2026-01-11 10:02:22] Checking for CVMFS
[2026-01-11 10:02:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 10:02:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 10:02:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 10:02:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 10:02:23] 2.13.3.0 1712136 5507 60728 155010 2 253 3103422 4194304 1764 130560 41 8456246 99.931 950807 263 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 10:02:23] CVMFS is ok
[2026-01-11 10:02:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 10:02:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 10:02:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 10:02:23] Further information can be found at the LHC@home message board.
[2026-01-11 10:02:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 10:02:23] Checking for apptainer binary...
[2026-01-11 10:02:23] apptainer is not installed, using version from CVMFS
[2026-01-11 10:02:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 10:02:23] Ryze
[2026-01-11 10:02:23] apptainer works
[2026-01-11 10:02:23] Set ATHENA_PROC_NUMBER=4
[2026-01-11 10:02:23] Set ATHENA_CORE_NUMBER=4
[2026-01-11 10:02:23] Starting ATLAS job with PandaID=6965383974
[2026-01-11 10:02:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 10:42:41]  *** The last 200 lines of the pilot log: ***
[2026-01-11 10:42:41]  lfn=log.47962010._002115.job.log.tgz.1
[2026-01-11 10:42:41]  mtime=0
[2026-01-11 10:42:41]  protocol_id=None
[2026-01-11 10:42:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 10:42:41]  replicas=None
[2026-01-11 10:42:41]  scope=mc16_13TeV
[2026-01-11 10:42:41]  status=None
[2026-01-11 10:42:41]  status_code=0
[2026-01-11 10:42:41]  storage_token=
[2026-01-11 10:42:41]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6965383974/log.47962010._002115.job.log.tgz.1
[2026-01-11 10:42:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c1/67/log.47962010._002115.job.log.tgz.1
[2026-01-11 10:42:41]  workdir=None
[2026-01-11 10:42:41] ]
[2026-01-11 10:42:41] 2026-01-11 09:41:48,302 | INFO     | transferring file log.47962010._002115.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383974/log.47962010._002115.job.log.tgz.1 to /var/lib/boinc
[2026-01-11 10:42:41] 2026-01-11 09:41:48,302 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383974/log.47962010._002115.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.479620
[2026-01-11 10:42:41] 2026-01-11 09:41:48,319 | INFO     | adding to output.list: log.47962010._002115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c1/67/log.47962010._002115.job.log.tgz.
[2026-01-11 10:42:41] 2026-01-11 09:41:48,320 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 10:42:41] 2026-01-11 09:41:48,320 | INFO     | summary of transferred files:
[2026-01-11 10:42:41] 2026-01-11 09:41:48,320 | INFO     |  -- lfn=log.47962010._002115.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 10:42:41] 2026-01-11 09:41:48,320 | INFO     | stage-out finished correctly
[2026-01-11 10:42:41] 2026-01-11 09:41:48,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 10:42:41] 2026-01-11 09:41:48,979 | INFO     | job 6965383974 has state=finished
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | preparing for final server update for job 6965383974 in state='finished'
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | this job has now completed (state=finished)
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | log transfer has been attempted: DONE
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | job 6965383974 has finished - writing final server update
[2026-01-11 10:42:41] 2026-01-11 09:41:48,980 | INFO     | total number of processed events: 50 (read)
[2026-01-11 10:42:41] 2026-01-11 09:41:48,981 | INFO     | executing command: lscpu
[2026-01-11 10:42:41] 2026-01-11 09:41:49,005 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 10:42:41] 2026-01-11 09:41:49,104 | INFO     | time since job start (2358s) is within the limit (349056.0s)
[2026-01-11 10:42:41] 2026-01-11 09:41:49,880 | INFO     | monitor loop #183: job 0:6965383974 is in state 'finished'
[2026-01-11 10:42:41] 2026-01-11 09:41:49,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:42:41] 2026-01-11 09:41:51,108 | INFO     | time since job start (2360s) is within the limit (349056.0s)
[2026-01-11 10:42:41] 2026-01-11 09:41:52,382 | INFO     | monitor loop #184: job 0:6965383974 is in state 'finished'
[2026-01-11 10:42:41] 2026-01-11 09:41:52,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,114 | INFO     | time since job start (2362s) is within the limit (349056.0s)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,577 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 10:42:41] 2026-01-11 09:41:53,579 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3760.9334583333334
[2026-01-11 10:42:41] 2026-01-11 09:41:53,582 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383974/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,582 | INFO     | extracted standard info from prmon json
[2026-01-11 10:42:41] 2026-01-11 09:41:53,582 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 10:42:41] 2026-01-11 09:41:53,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | fitting pss+swap vs Time
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | sum of square deviations: 10150888.0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | sum of deviations: -238312909.0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | mean x: 1768123423.5
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | mean y: 2125409.1875
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | intersect: 41512448104.63286
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | chi2: 0.053783915285672834
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | current memory leak: -23.48 B/s (using 32 data points, chi2=0.05)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,583 | INFO     | could have reported an average CPU frequency of 3647 MHz (5 samples)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | ..............................
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . Timing measurements:
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . get job = 0 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . initial setup = 1 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . payload setup = 4 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . stage-in = 0 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . payload execution = 2335 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . stage-out = 0 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | . log creation = 0 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,584 | INFO     | ..............................
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | 
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | job summary report
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | --------------------------------------------------
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | PanDA job id: 6965383974
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | task id: 47962010
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | errors: (none)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | pilot state: finished 
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | transexitcode: 0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,628 | INFO     | exeerrorcode: 0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | exeerrordiag: 
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | exitcode: 0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | exitmsg: OK
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | cpuconsumptiontime: 8210 s
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | nevents: 50
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | neventsw: 0
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | pid: 639795
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | pgrp: 639795
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | corecount: 4
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | event service: False
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | sizes: {0: 2284576, 1: 2284604, 3: 2284866, 11: 2284894, 2342: 2310699, 2343: 2319890, 2348: 2320112}
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | --------------------------------------------------
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | 
[2026-01-11 10:42:41] 2026-01-11 09:41:53,629 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-01-11 10:42:41] 2026-01-11 09:41:53,648 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,648 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,649 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 10:42:41] 2026-01-11 09:41:53,650 | INFO     | job 6965383974 has completed (purged errors)
[2026-01-11 10:42:41] 2026-01-11 09:41:53,650 | INFO     | overall cleanup function is called
[2026-01-11 10:42:41] 2026-01-11 09:41:54,221 | INFO     | PID=633204 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 10:42:41] 2026-01-11 09:41:54,221 | INFO     | .. there are 3 such processes running
[2026-01-11 10:42:41] 2026-01-11 09:41:54,661 | INFO     | --- collectZombieJob: --- 10, [639795]
[2026-01-11 10:42:41] 2026-01-11 09:41:54,661 | INFO     | zombie collector waiting for pid 639795
[2026-01-11 10:42:41] 2026-01-11 09:41:54,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 10:42:41] 2026-01-11 09:41:54,661 | INFO     | collected zombie processes
[2026-01-11 10:42:41] 2026-01-11 09:41:54,661 | INFO     | will attempt to kill all subprocesses of pid=639795
[2026-01-11 10:42:41] 2026-01-11 09:41:54,759 | INFO     | process IDs to be killed: [639795] (in reverse order)
[2026-01-11 10:42:41] 2026-01-11 09:41:54,804 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 10:42:41] 2026-01-11 09:41:54,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 10:42:41] 2026-01-11 09:41:54,807 | INFO     | did not find any defunct processes belonging to 639795
[2026-01-11 10:42:41] 2026-01-11 09:41:54,809 | INFO     | did not find any defunct processes belonging to 639795
[2026-01-11 10:42:41] 2026-01-11 09:41:54,809 | INFO     | ready for new job
[2026-01-11 10:42:41] 2026-01-11 09:41:54,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 10:42:41] 2026-01-11 09:41:54,810 | INFO     | ***************************************
[2026-01-11 10:42:41] 2026-01-11 09:41:54,811 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 10:42:41] 2026-01-11 09:41:54,811 | INFO     | ***************************************
[2026-01-11 10:42:41] 2026-01-11 09:41:54,811 | INFO     | 
[2026-01-11 10:42:41] 2026-01-11 09:41:54,812 | INFO     | architecture information:
[2026-01-11 10:42:41] 2026-01-11 09:41:54,812 | INFO     | executing command: cat /etc/os-release
[2026-01-11 10:42:41] 2026-01-11 09:41:54,830 | INFO     | cat /etc/os-release:
[2026-01-11 10:42:41] NAME="CentOS Linux"
[2026-01-11 10:42:41] VERSION="7 (Core)"
[2026-01-11 10:42:41] ID="centos"
[2026-01-11 10:42:41] ID_LIKE="rhel fedora"
[2026-01-11 10:42:41] VERSION_ID="7"
[2026-01-11 10:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 10:42:41] ANSI_COLOR="0;31"
[2026-01-11 10:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 10:42:41] HOME_URL="https://www.centos.org/"
[2026-01-11 10:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 10:42:41] 
[2026-01-11 10:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 10:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 10:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 10:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 10:42:41] 
[2026-01-11 10:42:41] 2026-01-11 09:41:54,830 | INFO     | ***************************************
[2026-01-11 10:42:41] 2026-01-11 09:41:55,333 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-01-11 10:42:41] 2026-01-11 09:41:55,351 | INFO     | sufficient remaining disk space (3073239941120 B)
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | INFO     | update_server=False
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 10:42:41] 2026-01-11 09:41:55,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:42:41] 2026-01-11 09:41:55,875 | INFO     | all payload control threads have been joined
[2026-01-11 10:42:41] 2026-01-11 09:41:55,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:42:41] 2026-01-11 09:41:55,890 | INFO     | aborting loop
[2026-01-11 10:42:41] 2026-01-11 09:41:56,010 | INFO     | all data control threads have been joined
[2026-01-11 10:42:41] 2026-01-11 09:41:56,059 | INFO     | all job control threads have been joined
[2026-01-11 10:42:41] 2026-01-11 09:41:56,356 | INFO     | [job] retrieve thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,357 | INFO     | [job] queue monitor thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 10:42:41] 2026-01-11 09:41:56,429 | INFO     | [payload] failed_post thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,449 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,881 | INFO     | [payload] control thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,895 | INFO     | [job] job monitor thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:56,998 | INFO     | [payload] validate_post thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,015 | INFO     | [data] control thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,064 | INFO     | [job] control thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,365 | INFO     | [job] validate thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,455 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,621 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:57,645 | INFO     | [data] copytool_in thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:58,393 | INFO     | [data] copytool_out thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:41:59,358 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:42:05,709 | INFO     | job.realtimelogging is not enabled
[2026-01-11 10:42:41] 2026-01-11 09:42:06,714 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 10:42:41] 2026-01-11 09:42:26,395 | INFO     | PID=633204 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 10:42:41] 2026-01-11 09:42:26,395 | INFO     | .. there are 3 such processes running
[2026-01-11 10:42:41] 2026-01-11 09:42:26,395 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 10:42:41] 2026-01-11 09:42:26,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 10:42:41] 2026-01-11 09:42:26,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 10:42:41] 2026-01-11 09:42:34,648 | INFO     | [monitor] cgroup control has ended
[2026-01-11 10:42:41] 2026-01-11 09:42:36,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137176379193152)>', '<ExcThread(monitor, started 137175383389952)>']
[2026-01-11 10:42:41] 2026-01-11 09:42:37,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 10:42:41] 2026-01-11 09:42:37,449 | INFO     | [monitor] control thread has ended
[2026-01-11 10:42:41] 2026-01-11 09:42:41,738 | INFO     | all workflow threads have been joined
[2026-01-11 10:42:41] 2026-01-11 09:42:41,750 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 10:42:41] 2026-01-11 09:42:41,751 | INFO     | traces error code: 0
[2026-01-11 10:42:41] 2026-01-11 09:42:41,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 10:42:41] 2026-01-11 09:42:41,820 [wrapper] ==== pilot stdout END ====
[2026-01-11 10:42:41] 2026-01-11 09:42:41,821 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 10:42:41] 2026-01-11 09:42:41,825 [wrapper] pilotpid: 633204
[2026-01-11 10:42:41] 2026-01-11 09:42:41,827 [wrapper] Pilot exit status: 0
[2026-01-11 10:42:41] 2026-01-11 09:42:41,839 [wrapper] pandaids: 6965383974
[2026-01-11 10:42:41] 2026-01-11 09:42:41,869 [wrapper] cleanup supervisor_pilot  652312 633205
[2026-01-11 10:42:41] 2026-01-11 09:42:41,872 [wrapper] Test setup, not cleaning
[2026-01-11 10:42:41] 2026-01-11 09:42:41,874 [wrapper] apfmon messages muted
[2026-01-11 10:42:41] 2026-01-11 09:42:41,876 [wrapper] ==== wrapper stdout END ====
[2026-01-11 10:42:41] 2026-01-11 09:42:41,878 [wrapper] ==== wrapper stderr END ====
[2026-01-11 10:42:41]  *** Error codes and diagnostics ***
[2026-01-11 10:42:41]     "exeErrorCode": 0,
[2026-01-11 10:42:41]     "exeErrorDiag": "",
[2026-01-11 10:42:41]     "pilotErrorCode": 0,
[2026-01-11 10:42:41]     "pilotErrorDiag": "",
[2026-01-11 10:42:41]  *** Listing of results directory ***
[2026-01-11 10:42:41] insgesamt 436880
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:13 queuedata.json
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-11 10:42:41] -rwx------ 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc       100 Jan 11 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 10:42:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 10:02 run_atlas
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc       105 Jan 11 10:02 job.xml
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc 394320947 Jan 11 10:02 EVNT.47962006._000059.pool.root.1
[2026-01-11 10:42:41] drwxrwx--x 2 boinc boinc      4096 Jan 11 10:02 shared
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc    592615 Jan 11 10:02 input.tar.gz
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 10:02 start_atlas.sh
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc         0 Jan 11 10:02 boinc_setup_complete
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc      8869 Jan 11 10:02 init_data.xml
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc         0 Jan 11 10:02 boinc_lockfile
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc      2890 Jan 11 10:02 pandaJob.out
[2026-01-11 10:42:41] -rw------- 1 boinc boinc    989548 Jan 11 10:02 agis_schedconf.cvmfs.json
[2026-01-11 10:42:41] -rw------- 1 boinc boinc   1516240 Jan 11 10:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 10:42:41] drwx------ 5 boinc boinc      4096 Jan 11 10:02 pilot3
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc       529 Jan 11 10:38 boinc_task_state.xml
[2026-01-11 10:42:41] -rw------- 1 boinc boinc  46892385 Jan 11 10:41 HITS.47962010._002115.pool.root.1
[2026-01-11 10:42:41] -rw------- 1 boinc boinc      1010 Jan 11 10:41 memory_monitor_summary.json
[2026-01-11 10:42:41] -rw------- 1 boinc boinc    731780 Jan 11 10:41 log.47962010._002115.job.log.tgz.1
[2026-01-11 10:42:41] -rw------- 1 boinc boinc        95 Jan 11 10:41 pilot_heartbeat.json
[2026-01-11 10:42:41] -rw------- 1 boinc boinc      8486 Jan 11 10:41 heartbeat.json
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc      8192 Jan 11 10:42 boinc_mmap_file
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc        26 Jan 11 10:42 wrapper_checkpoint.txt
[2026-01-11 10:42:41] -rw------- 1 boinc boinc      4903 Jan 11 10:42 pilotlog.txt
[2026-01-11 10:42:41] -rw------- 1 boinc boinc    388260 Jan 11 10:42 log.47962010._002115.job.log.1
[2026-01-11 10:42:41] -rw------- 1 boinc boinc       353 Jan 11 10:42 output.list
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc       620 Jan 11 10:42 runtime_log
[2026-01-11 10:42:41] -rw------- 1 boinc boinc   1136640 Jan 11 10:42 result.tar.gz
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc      8859 Jan 11 10:42 runtime_log.err
[2026-01-11 10:42:41] -rw------- 1 boinc boinc       635 Jan 11 10:42 ojyNDmRyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDpmKDmKlsken.diag
[2026-01-11 10:42:41] -rw-r--r-- 1 boinc boinc     21856 Jan 11 10:42 stderr.txt
[2026-01-11 10:42:41] HITS file was successfully produced:
[2026-01-11 10:42:41] -rw------- 1 boinc boinc 46892385 Jan 11 10:41 shared/HITS.pool.root.1
[2026-01-11 10:42:41]  *** Contents of shared directory: ***
[2026-01-11 10:42:41] insgesamt 432584
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc 394320947 Jan 11 10:02 ATLAS.root_0
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc    592615 Jan 11 10:02 input.tar.gz
[2026-01-11 10:42:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 10:02 start_atlas.sh
[2026-01-11 10:42:41] -rw------- 1 boinc boinc  46892385 Jan 11 10:41 HITS.pool.root.1
[2026-01-11 10:42:41] -rw------- 1 boinc boinc   1136640 Jan 11 10:42 result.tar.gz
10:42:43 (629404): run_atlas exited; CPU time 8189.626062
10:42:43 (629404): called boinc_finish(0)

</stderr_txt>
]]>

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