Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:27:28 (709705): wrapper (7.7.26015): starting
11:27:28 (709705): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 11:27:28] Arguments: --nthreads 4
[2026-01-11 11:27:28] Threads: 4
[2026-01-11 11:27:28] Checking for CVMFS
[2026-01-11 11:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 11:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 11:27:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 11:27:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 11:27:28] 2.13.3.0 1712136 5592 57972 155013 2 83 3118506 4194304 1764 130560 41 8725136 99.932 956506 258 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 11:27:28] CVMFS is ok
[2026-01-11 11:27:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 11:27:28] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 11:27:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 11:27:28] Further information can be found at the LHC@home message board.
[2026-01-11 11:27:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 11:27:28] Checking for apptainer binary...
[2026-01-11 11:27:28] apptainer is not installed, using version from CVMFS
[2026-01-11 11:27:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 11:27:28] Ryze
[2026-01-11 11:27:28] apptainer works
[2026-01-11 11:27:28] Set ATHENA_PROC_NUMBER=4
[2026-01-11 11:27:28] Set ATHENA_CORE_NUMBER=4
[2026-01-11 11:27:28] Starting ATLAS job with PandaID=6965383970
[2026-01-11 11:27:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 12:10:47]  *** The last 200 lines of the pilot log: ***
[2026-01-11 12:10:47] ]
[2026-01-11 12:10:47] 2026-01-11 11:09:51,973 | INFO     | transferring file log.47962010._002111.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383970/log.47962010._002111.job.log.tgz.1 to /var/lib/boinc
[2026-01-11 12:10:47] 2026-01-11 11:09:51,973 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383970/log.47962010._002111.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.479620
[2026-01-11 12:10:47] 2026-01-11 11:09:51,990 | INFO     | adding to output.list: log.47962010._002111.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a0/de/log.47962010._002111.job.log.tgz.
[2026-01-11 12:10:47] 2026-01-11 11:09:51,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 12:10:47] 2026-01-11 11:09:51,990 | INFO     | summary of transferred files:
[2026-01-11 12:10:47] 2026-01-11 11:09:51,991 | INFO     |  -- lfn=log.47962010._002111.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 12:10:47] 2026-01-11 11:09:51,991 | INFO     | stage-out finished correctly
[2026-01-11 12:10:47] 2026-01-11 11:09:52,174 | WARNING  | process 720109 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 12:10:47] 2026-01-11 11:09:52,174 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383970/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 12:10:47] 2026-01-11 11:09:52,259 | INFO     | number of running child processes to parent process 720109: 1
[2026-01-11 12:10:47] 2026-01-11 11:09:52,259 | INFO     | maximum number of monitored processes: 9
[2026-01-11 12:10:47] 2026-01-11 11:09:53,270 | INFO     | time since job start (2535s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:09:54,761 | INFO     | monitor loop #196: job 0:6965383970 is in state 'finished'
[2026-01-11 12:10:47] 2026-01-11 11:09:54,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:10:47] 2026-01-11 11:09:55,242 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 12:10:47] 2026-01-11 11:09:55,280 | INFO     | time since job start (2537s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:09:55,868 | INFO     | job 6965383970 has state=finished
[2026-01-11 12:10:47] 2026-01-11 11:09:55,868 | INFO     | preparing for final server update for job 6965383970 in state='finished'
[2026-01-11 12:10:47] 2026-01-11 11:09:55,868 | INFO     | this job has now completed (state=finished)
[2026-01-11 12:10:47] 2026-01-11 11:09:55,868 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 12:10:47] 2026-01-11 11:09:55,869 | INFO     | log transfer has been attempted: DONE
[2026-01-11 12:10:47] 2026-01-11 11:09:55,869 | INFO     | job 6965383970 has finished - writing final server update
[2026-01-11 12:10:47] 2026-01-11 11:09:55,869 | INFO     | total number of processed events: 50 (read)
[2026-01-11 12:10:47] 2026-01-11 11:09:55,870 | INFO     | executing command: lscpu
[2026-01-11 12:10:47] 2026-01-11 11:09:55,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 12:10:47] 2026-01-11 11:09:57,264 | INFO     | monitor loop #197: job 0:6965383970 is in state 'finished'
[2026-01-11 12:10:47] 2026-01-11 11:09:57,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:10:47] 2026-01-11 11:09:57,285 | INFO     | time since job start (2539s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:09:59,290 | INFO     | time since job start (2541s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:09:59,767 | INFO     | monitor loop #198: job 0:6965383970 is in state 'finished'
[2026-01-11 12:10:47] 2026-01-11 11:09:59,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:10:47] 2026-01-11 11:10:01,296 | INFO     | time since job start (2543s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:10:01,296 | INFO     | 2545s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 12:10:47] 2026-01-11 11:10:02,270 | INFO     | monitor loop #199: job 0:6965383970 is in state 'finished'
[2026-01-11 12:10:47] 2026-01-11 11:10:02,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:10:47] 2026-01-11 11:10:03,302 | INFO     | time since job start (2545s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:10:04,773 | INFO     | monitor loop #200: job 0:6965383970 is in state 'finished'
[2026-01-11 12:10:47] 2026-01-11 11:10:04,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:10:47] 2026-01-11 11:10:05,307 | INFO     | time since job start (2547s) is within the limit (349056.0s)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,231 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 12:10:47] 2026-01-11 11:10:06,233 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3746.8949166666666
[2026-01-11 12:10:47] 2026-01-11 11:10:06,236 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6965383970/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,236 | INFO     | extracted standard info from prmon json
[2026-01-11 12:10:47] 2026-01-11 11:10:06,236 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 12:10:47] 2026-01-11 11:10:06,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | fitting pss+swap vs Time
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | sum of square deviations: 13283970.0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | sum of deviations: -500833668.0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | mean x: 1768128623.0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | mean y: 2196872.942857143
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | intersect: 66664372694.845436
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | chi2: 0.0560720450869462
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | current memory leak: -37.70 B/s (using 35 data points, chi2=0.06)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | could have reported an average CPU frequency of 3732 MHz (5 samples)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | ..............................
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . Timing measurements:
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . get job = 0 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . initial setup = 1 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . payload setup = 5 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . stage-in = 0 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . payload execution = 2509 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . stage-out = 0 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,237 | INFO     | . log creation = 0 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,238 | INFO     | ..............................
[2026-01-11 12:10:47] 2026-01-11 11:10:06,281 | INFO     | 
[2026-01-11 12:10:47] 2026-01-11 11:10:06,281 | INFO     | job summary report
[2026-01-11 12:10:47] 2026-01-11 11:10:06,281 | INFO     | --------------------------------------------------
[2026-01-11 12:10:47] 2026-01-11 11:10:06,281 | INFO     | PanDA job id: 6965383970
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | task id: 47962010
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | errors: (none)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | pilot state: finished 
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | transexitcode: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | exeerrorcode: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | exeerrordiag: 
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | exitcode: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | exitmsg: OK
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | cpuconsumptiontime: 8859 s
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | nevents: 50
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | neventsw: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | pid: 720109
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | pgrp: 720109
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | corecount: 4
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | event service: False
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | sizes: {0: 2284576, 3: 2284838, 11: 2284866, 2518: 2310834, 2520: 2319842, 2523: 2319898, 2534: 2320304}
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | --------------------------------------------------
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | 
[2026-01-11 12:10:47] 2026-01-11 11:10:06,282 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-01-11 12:10:47] 2026-01-11 11:10:06,302 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,302 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 12:10:47] 2026-01-11 11:10:06,304 | INFO     | job 6965383970 has completed (purged errors)
[2026-01-11 12:10:47] 2026-01-11 11:10:06,304 | INFO     | overall cleanup function is called
[2026-01-11 12:10:47] 2026-01-11 11:10:07,315 | INFO     | --- collectZombieJob: --- 10, [720109]
[2026-01-11 12:10:47] 2026-01-11 11:10:07,315 | INFO     | zombie collector waiting for pid 720109
[2026-01-11 12:10:47] 2026-01-11 11:10:07,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 12:10:47] 2026-01-11 11:10:07,315 | INFO     | collected zombie processes
[2026-01-11 12:10:47] 2026-01-11 11:10:07,316 | INFO     | will attempt to kill all subprocesses of pid=720109
[2026-01-11 12:10:47] 2026-01-11 11:10:07,398 | INFO     | process IDs to be killed: [720109] (in reverse order)
[2026-01-11 12:10:47] 2026-01-11 11:10:07,441 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 12:10:47] 2026-01-11 11:10:07,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 12:10:47] 2026-01-11 11:10:07,444 | INFO     | did not find any defunct processes belonging to 720109
[2026-01-11 12:10:47] 2026-01-11 11:10:07,446 | INFO     | did not find any defunct processes belonging to 720109
[2026-01-11 12:10:47] 2026-01-11 11:10:07,447 | INFO     | ready for new job
[2026-01-11 12:10:47] 2026-01-11 11:10:07,447 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 12:10:47] 2026-01-11 11:10:07,447 | INFO     | ***************************************
[2026-01-11 12:10:47] 2026-01-11 11:10:07,447 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 12:10:47] 2026-01-11 11:10:07,447 | INFO     | ***************************************
[2026-01-11 12:10:47] 2026-01-11 11:10:07,448 | INFO     | 
[2026-01-11 12:10:47] 2026-01-11 11:10:07,448 | INFO     | architecture information:
[2026-01-11 12:10:47] 2026-01-11 11:10:07,449 | INFO     | executing command: cat /etc/os-release
[2026-01-11 12:10:47] 2026-01-11 11:10:07,462 | INFO     | cat /etc/os-release:
[2026-01-11 12:10:47] NAME="CentOS Linux"
[2026-01-11 12:10:47] VERSION="7 (Core)"
[2026-01-11 12:10:47] ID="centos"
[2026-01-11 12:10:47] ID_LIKE="rhel fedora"
[2026-01-11 12:10:47] VERSION_ID="7"
[2026-01-11 12:10:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 12:10:47] ANSI_COLOR="0;31"
[2026-01-11 12:10:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 12:10:47] HOME_URL="https://www.centos.org/"
[2026-01-11 12:10:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 12:10:47] 
[2026-01-11 12:10:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 12:10:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 12:10:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 12:10:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 12:10:47] 
[2026-01-11 12:10:47] 2026-01-11 11:10:07,462 | INFO     | ***************************************
[2026-01-11 12:10:47] 2026-01-11 11:10:07,964 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | INFO     | sufficient remaining disk space (3074439512064 B)
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | INFO     | update_server=False
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:10:47] 2026-01-11 11:10:07,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 12:10:47] 2026-01-11 11:10:08,165 | INFO     | all data control threads have been joined
[2026-01-11 12:10:47] 2026-01-11 11:10:08,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:10:47] 2026-01-11 11:10:08,281 | INFO     | aborting loop
[2026-01-11 12:10:47] 2026-01-11 11:10:08,685 | INFO     | all job control threads have been joined
[2026-01-11 12:10:47] 2026-01-11 11:10:08,985 | INFO     | [job] retrieve thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:08,986 | INFO     | [job] queue monitor thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,019 | INFO     | [payload] failed_post thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,136 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,170 | INFO     | all payload control threads have been joined
[2026-01-11 12:10:47] 2026-01-11 11:10:09,170 | INFO     | [data] control thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,286 | INFO     | [job] job monitor thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,690 | INFO     | [job] control thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:09,986 | INFO     | [data] copytool_out thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,110 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,175 | INFO     | [payload] control thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,228 | INFO     | [job] validate thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,310 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 12:10:47] 2026-01-11 11:10:10,353 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,376 | INFO     | [payload] validate_post thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,414 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:10,467 | INFO     | [data] copytool_in thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:14,315 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 12:10:47] 2026-01-11 11:10:38,485 | INFO     | PID=713509 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 12:10:47] 2026-01-11 11:10:38,485 | INFO     | .. there are 3 such processes running
[2026-01-11 12:10:47] 2026-01-11 11:10:38,485 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 12:10:47] 2026-01-11 11:10:38,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 12:10:47] 2026-01-11 11:10:38,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 12:10:47] 2026-01-11 11:10:41,684 | INFO     | [monitor] cgroup control has ended
[2026-01-11 12:10:47] 2026-01-11 11:10:42,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137174603433792)>', '<ExcThread(monitor, started 137173906994944)>']
[2026-01-11 12:10:47] 2026-01-11 11:10:43,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 12:10:47] 2026-01-11 11:10:43,511 | INFO     | [monitor] control thread has ended
[2026-01-11 12:10:47] 2026-01-11 11:10:47,707 | INFO     | all workflow threads have been joined
[2026-01-11 12:10:47] 2026-01-11 11:10:47,707 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 12:10:47] 2026-01-11 11:10:47,707 | INFO     | traces error code: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:47,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 12:10:47] 2026-01-11 11:10:47,781 [wrapper] ==== pilot stdout END ====
[2026-01-11 12:10:47] 2026-01-11 11:10:47,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 12:10:47] 2026-01-11 11:10:47,785 [wrapper] pilotpid: 713509
[2026-01-11 12:10:47] 2026-01-11 11:10:47,787 [wrapper] Pilot exit status: 0
[2026-01-11 12:10:47] 2026-01-11 11:10:47,796 [wrapper] pandaids: 6965383970
[2026-01-11 12:10:47] 2026-01-11 11:10:47,830 [wrapper] cleanup supervisor_pilot  749139 713510
[2026-01-11 12:10:47] 2026-01-11 11:10:47,833 [wrapper] Test setup, not cleaning
[2026-01-11 12:10:47] 2026-01-11 11:10:47,835 [wrapper] apfmon messages muted
[2026-01-11 12:10:47] 2026-01-11 11:10:47,837 [wrapper] ==== wrapper stdout END ====
[2026-01-11 12:10:47] 2026-01-11 11:10:47,839 [wrapper] ==== wrapper stderr END ====
[2026-01-11 12:10:47]  *** Error codes and diagnostics ***
[2026-01-11 12:10:47]     "exeErrorCode": 0,
[2026-01-11 12:10:47]     "exeErrorDiag": "",
[2026-01-11 12:10:47]     "pilotErrorCode": 0,
[2026-01-11 12:10:47]     "pilotErrorDiag": "",
[2026-01-11 12:10:47]  *** Listing of results directory ***
[2026-01-11 12:10:47] insgesamt 434940
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc      5112 Jan 10 14:13 queuedata.json
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc    579449 Jan 10 14:14 pilot3.tar.gz
[2026-01-11 12:10:47] -rwx------ 1 boinc boinc     36322 Jan 10 14:14 runpilot2-wrapper.sh
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc       100 Jan 11 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 12:10:47] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 11:27 run_atlas
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc       105 Jan 11 11:27 job.xml
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc 394320947 Jan 11 11:27 EVNT.47962006._000059.pool.root.1
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc    592622 Jan 11 11:27 input.tar.gz
[2026-01-11 12:10:47] drwxrwx--x 2 boinc boinc      4096 Jan 11 11:27 shared
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:27 start_atlas.sh
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:27 boinc_setup_complete
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc      8869 Jan 11 11:27 init_data.xml
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:27 boinc_lockfile
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc      2890 Jan 11 11:27 pandaJob.out
[2026-01-11 12:10:47] -rw------- 1 boinc boinc    989548 Jan 11 11:27 agis_schedconf.cvmfs.json
[2026-01-11 12:10:47] -rw------- 1 boinc boinc   1516240 Jan 11 11:27 agis_ddmendpoints.agis.ALL.json
[2026-01-11 12:10:47] drwx------ 5 boinc boinc      4096 Jan 11 11:27 pilot3
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc       528 Jan 11 12:05 boinc_task_state.xml
[2026-01-11 12:10:47] -rw------- 1 boinc boinc  44839006 Jan 11 12:09 HITS.47962010._002111.pool.root.1
[2026-01-11 12:10:47] -rw------- 1 boinc boinc      1013 Jan 11 12:09 memory_monitor_summary.json
[2026-01-11 12:10:47] -rw------- 1 boinc boinc    729513 Jan 11 12:09 log.47962010._002111.job.log.tgz.1
[2026-01-11 12:10:47] -rw------- 1 boinc boinc        95 Jan 11 12:10 pilot_heartbeat.json
[2026-01-11 12:10:47] -rw------- 1 boinc boinc      8481 Jan 11 12:10 heartbeat.json
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc        26 Jan 11 12:10 wrapper_checkpoint.txt
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc      8192 Jan 11 12:10 boinc_mmap_file
[2026-01-11 12:10:47] -rw------- 1 boinc boinc      4831 Jan 11 12:10 pilotlog.txt
[2026-01-11 12:10:47] -rw------- 1 boinc boinc    414704 Jan 11 12:10 log.47962010._002111.job.log.1
[2026-01-11 12:10:47] -rw------- 1 boinc boinc       353 Jan 11 12:10 output.list
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc       620 Jan 11 12:10 runtime_log
[2026-01-11 12:10:47] -rw------- 1 boinc boinc   1167360 Jan 11 12:10 result.tar.gz
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc      8859 Jan 11 12:10 runtime_log.err
[2026-01-11 12:10:47] -rw------- 1 boinc boinc       636 Jan 11 12:10 2cwNDmRyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBpmKDmAJfhKo.diag
[2026-01-11 12:10:47] -rw-r--r-- 1 boinc boinc     22603 Jan 11 12:10 stderr.txt
[2026-01-11 12:10:47] HITS file was successfully produced:
[2026-01-11 12:10:47] -rw------- 1 boinc boinc 44839006 Jan 11 12:09 shared/HITS.pool.root.1
[2026-01-11 12:10:47]  *** Contents of shared directory: ***
[2026-01-11 12:10:47] insgesamt 430616
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc 394320947 Jan 11 11:27 ATLAS.root_0
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc    592622 Jan 11 11:27 input.tar.gz
[2026-01-11 12:10:47] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:27 start_atlas.sh
[2026-01-11 12:10:47] -rw------- 1 boinc boinc  44839006 Jan 11 12:09 HITS.pool.root.1
[2026-01-11 12:10:47] -rw------- 1 boinc boinc   1167360 Jan 11 12:10 result.tar.gz
12:10:49 (709705): run_atlas exited; CPU time 8837.519466
12:10:49 (709705): called boinc_finish(0)

</stderr_txt>
]]>

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