Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:56 (408681): wrapper (7.7.26015): starting
08:20:56 (408681): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:20:57] Arguments: --nthreads 9
[2026-01-10 08:20:57] Threads: 9
[2026-01-10 08:20:57] Checking for CVMFS
[2026-01-10 08:20:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:20:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:20:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:20:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:20:58] 2.13.3.0 10749 51217 492084 154981 0 117 26568587 32935936 36372 16776704 0 539985529 99.786 288820832 29008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:20:58] CVMFS is ok
[2026-01-10 08:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:20:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:20:58] Further information can be found at the LHC@home message board.
[2026-01-10 08:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:20:58] Checking for apptainer binary...
[2026-01-10 08:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:20:59] Running /usr/bin/apptainer --version
[2026-01-10 08:20:59] apptainer version 1.4.5-2.el9
[2026-01-10 08:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:00] lc-12-33.aglt2.org
[2026-01-10 08:21:00] apptainer works
[2026-01-10 08:21:00] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:21:00] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:21:00] Starting ATLAS job with PandaID=6965384232
[2026-01-10 08:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:11:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:11:29] 2026-01-10 15:10:46,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:29] 2026-01-10 15:10:46,679 | INFO     | time since job start (6516s) is within the limit (349056.0s)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,467 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:11:29] 2026-01-10 15:10:47,505 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2916.8253437499984
[2026-01-10 10:11:29] 2026-01-10 15:10:47,601 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384232/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,602 | INFO     | extracted standard info from prmon json
[2026-01-10 10:11:29] 2026-01-10 15:10:47,602 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:11:29] 2026-01-10 15:10:47,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:11:29] 2026-01-10 15:10:47,631 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:11:29] 2026-01-10 15:10:47,632 | INFO     | sum of square deviations: 348722876.1153839
[2026-01-10 10:11:29] 2026-01-10 15:10:47,632 | INFO     | sum of deviations: 7480763260.576916
[2026-01-10 10:11:29] 2026-01-10 15:10:47,638 | INFO     | mean x: 1768054625.6346154
[2026-01-10 10:11:29] 2026-01-10 15:10:47,639 | INFO     | mean y: 2349056.173076923
[2026-01-10 10:11:29] 2026-01-10 15:10:47,639 | INFO     | intersect: -37925756588.84979
[2026-01-10 10:11:29] 2026-01-10 15:10:47,639 | INFO     | chi2: 10.352971114286012
[2026-01-10 10:11:29] 2026-01-10 15:10:47,639 | INFO     | sum of square deviations: 300895774.5050512
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | sum of deviations: 36957449622.73737
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | mean x: 1768054473.2929294
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | mean y: 2443139.767676768
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | intersect: -217158413420.8218
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | chi2: 6.587348645633974
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | current chi2=6.587348645633974 (change=36.372384575244055 %)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,640 | INFO     | sum of square deviations: 257638292.13829744
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | sum of deviations: 49087287549.74467
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | mean x: 1768054320.9042554
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | mean y: 2484977.638297872
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | intersect: -336861224735.2344
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | chi2: 5.454535489116019
[2026-01-10 10:11:29] 2026-01-10 15:10:47,641 | INFO     | current chi2=5.454535489116019 (change=17.19679976660674 %)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,642 | INFO     | right removable region: 93
[2026-01-10 10:11:29] 2026-01-10 15:10:47,642 | INFO     | sum of square deviations: 300696914.5050512
[2026-01-10 10:11:29] 2026-01-10 15:10:47,665 | INFO     | sum of deviations: -24895029758.080807
[2026-01-10 10:11:29] 2026-01-10 15:10:47,665 | INFO     | mean x: 1768054778.2929294
[2026-01-10 10:11:29] 2026-01-10 15:10:47,665 | INFO     | mean y: 2451793.3131313133
[2026-01-10 10:11:29] 2026-01-10 15:10:47,666 | INFO     | intersect: 146381660213.0924
[2026-01-10 10:11:29] 2026-01-10 15:10:47,666 | INFO     | chi2: 6.06758708415544
[2026-01-10 10:11:29] 2026-01-10 15:10:47,666 | INFO     | current chi2=6.06758708415544 (change=41.392794230993196 %)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,666 | INFO     | sum of square deviations: 257310964.13829744
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | sum of deviations: -37216908319.702126
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | mean x: 1768054930.9042554
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | mean y: 2494287.255319149
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | intersect: 255730183497.94308
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | chi2: 5.072627378573302
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | current chi2=5.072627378573302 (change=16.397946857331803 %)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | left removable region: 20
[2026-01-10 10:11:29] 2026-01-10 15:10:47,667 | INFO     | sum of square deviations: 120535793.34246568
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | sum of deviations: -23695487.36986327
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | mean x: 1768054900.8493152
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | mean y: 2699172.602739726
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | intersect: 350271635.6077176
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | chi2: 0.07652818455415718
[2026-01-10 10:11:29] 2026-01-10 15:10:47,668 | INFO     | current memory leak: -0.20 B/s (using 73 data points, chi2=0.08)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | could have reported an average CPU frequency of 2870 MHz (7 samples)
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | ..............................
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | . Timing measurements:
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | . get job = 0 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | . initial setup = 7 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,669 | INFO     | . payload setup = 42 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,670 | INFO     | . stage-in = 0 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,670 | INFO     | . payload execution = 6352 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,670 | INFO     | . stage-out = 3 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,670 | INFO     | . log creation = 1 s
[2026-01-10 10:11:29] 2026-01-10 15:10:47,670 | INFO     | ..............................
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | 
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | job summary report
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | --------------------------------------------------
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | PanDA job id: 6965384232
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | task id: 47962010
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | errors: (none)
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:11:29] 2026-01-10 15:10:48,424 | INFO     | pilot state: finished 
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | transexitcode: 0
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | exeerrorcode: 0
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | exeerrordiag: 
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | exitcode: 0
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | exitmsg: OK
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | cpuconsumptiontime: 15900 s
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | nevents: 50
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | neventsw: 0
[2026-01-10 10:11:29] 2026-01-10 15:10:48,425 | INFO     | pid: 511460
[2026-01-10 10:11:29] 2026-01-10 15:10:48,427 | INFO     | pgrp: 511460
[2026-01-10 10:11:29] 2026-01-10 15:10:48,427 | INFO     | corecount: 9
[2026-01-10 10:11:29] 2026-01-10 15:10:48,427 | INFO     | event service: False
[2026-01-10 10:11:29] 2026-01-10 15:10:48,428 | INFO     | sizes: {0: 2283739, 1: 2284424, 2: 2284424, 3: 2284651, 14: 2284651, 25: 2284679, 36: 2284835, 37: 2285125, 47: 2285153, 6399: 2312858, 6403: 2321852, 6404: 232218
[2026-01-10 10:11:29] 2026-01-10 15:10:48,428 | INFO     | --------------------------------------------------
[2026-01-10 10:11:29] 2026-01-10 15:10:48,428 | INFO     | 
[2026-01-10 10:11:29] 2026-01-10 15:10:48,428 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,539 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:11:29] 2026-01-10 15:10:48,540 | INFO     | job 6965384232 has completed (purged errors)
[2026-01-10 10:11:29] 2026-01-10 15:10:48,540 | INFO     | overall cleanup function is called
[2026-01-10 10:11:29] 2026-01-10 15:10:49,581 | INFO     | --- collectZombieJob: --- 10, [511460]
[2026-01-10 10:11:29] 2026-01-10 15:10:49,581 | INFO     | zombie collector waiting for pid 511460
[2026-01-10 10:11:29] 2026-01-10 15:10:49,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:11:29] 2026-01-10 15:10:49,582 | INFO     | collected zombie processes
[2026-01-10 10:11:29] 2026-01-10 15:10:49,582 | INFO     | will attempt to kill all subprocesses of pid=511460
[2026-01-10 10:11:29] 2026-01-10 15:10:52,876 | INFO     | PID=442180 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:11:29] 2026-01-10 15:10:52,876 | INFO     | .. there are 60 such processes running
[2026-01-10 10:11:29] 2026-01-10 15:10:53,191 | INFO     | process IDs to be killed: [511460] (in reverse order)
[2026-01-10 10:11:29] 2026-01-10 15:10:54,356 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:11:29] 2026-01-10 15:10:54,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:11:29] 2026-01-10 15:10:54,411 | INFO     | did not find any defunct processes belonging to 511460
[2026-01-10 10:11:29] 2026-01-10 15:10:54,468 | INFO     | did not find any defunct processes belonging to 511460
[2026-01-10 10:11:29] 2026-01-10 15:10:54,468 | INFO     | ready for new job
[2026-01-10 10:11:29] 2026-01-10 15:10:54,468 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:11:29] 2026-01-10 15:10:54,470 | INFO     | ***************************************
[2026-01-10 10:11:29] 2026-01-10 15:10:54,470 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:11:29] 2026-01-10 15:10:54,470 | INFO     | ***************************************
[2026-01-10 10:11:29] 2026-01-10 15:10:54,470 | INFO     | 
[2026-01-10 10:11:29] 2026-01-10 15:10:54,483 | INFO     | architecture information:
[2026-01-10 10:11:29] 2026-01-10 15:10:54,487 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:11:29] 2026-01-10 15:10:54,534 | INFO     | cat /etc/os-release:
[2026-01-10 10:11:29] NAME="CentOS Linux"
[2026-01-10 10:11:29] VERSION="7 (Core)"
[2026-01-10 10:11:29] ID="centos"
[2026-01-10 10:11:29] ID_LIKE="rhel fedora"
[2026-01-10 10:11:29] VERSION_ID="7"
[2026-01-10 10:11:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:11:29] ANSI_COLOR="0;31"
[2026-01-10 10:11:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:11:29] HOME_URL="https://www.centos.org/"
[2026-01-10 10:11:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:11:29] 
[2026-01-10 10:11:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:11:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:11:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:11:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:11:29] 
[2026-01-10 10:11:29] 2026-01-10 15:10:54,534 | INFO     | ***************************************
[2026-01-10 10:11:29] 2026-01-10 15:10:55,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 10:11:29] 2026-01-10 15:10:55,148 | INFO     | sufficient remaining disk space (73180119040 B)
[2026-01-10 10:11:29] 2026-01-10 15:10:55,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:11:29] 2026-01-10 15:10:55,148 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:11:29] 2026-01-10 15:10:55,148 | INFO     | update_server=False
[2026-01-10 10:11:29] 2026-01-10 15:10:55,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:11:29] 2026-01-10 15:10:55,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:29] 2026-01-10 15:10:55,158 | INFO     | aborting loop
[2026-01-10 10:11:29] 2026-01-10 15:10:55,285 | INFO     | all job control threads have been joined
[2026-01-10 10:11:29] 2026-01-10 15:10:55,310 | INFO     | all payload control threads have been joined
[2026-01-10 10:11:29] 2026-01-10 15:10:55,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:11:29] 2026-01-10 15:10:56,171 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,172 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:11:29] 2026-01-10 15:10:56,222 | INFO     | all data control threads have been joined
[2026-01-10 10:11:29] 2026-01-10 15:10:56,291 | INFO     | [job] control thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,316 | INFO     | [payload] control thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,782 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,785 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:56,786 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,079 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,228 | INFO     | [data] control thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,348 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,352 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,476 | INFO     | [job] validate thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,520 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:57,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:29] 2026-01-10 15:10:58,203 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:58,553 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:10:59,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:11:29] 2026-01-10 15:11:21,328 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:11:29] 2026-01-10 15:11:22,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615040091968)>', '<ExcThread(monitor, started 140614758795008)>']
[2026-01-10 10:11:29] 2026-01-10 15:11:26,444 | INFO     | PID=442180 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | INFO     | .. there are 60 such processes running
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:11:29] 2026-01-10 15:11:26,445 | INFO     | [monitor] control thread has ended
[2026-01-10 10:11:29] 2026-01-10 15:11:27,375 | INFO     | all workflow threads have been joined
[2026-01-10 10:11:29] 2026-01-10 15:11:27,381 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:11:29] 2026-01-10 15:11:27,381 | INFO     | traces error code: 0
[2026-01-10 10:11:29] 2026-01-10 15:11:27,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:11:29] 2026-01-10 15:11:27,876 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:11:29] 2026-01-10 15:11:27,899 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:11:29] 2026-01-10 15:11:27,929 [wrapper] pilotpid: 442180
[2026-01-10 10:11:29] 2026-01-10 15:11:27,948 [wrapper] Pilot exit status: 0
[2026-01-10 10:11:29] 2026-01-10 15:11:28,038 [wrapper] pandaids: 6965384232
[2026-01-10 10:11:29] 2026-01-10 15:11:28,978 [wrapper] cleanup supervisor_pilot 2380952 442181
[2026-01-10 10:11:29] 2026-01-10 15:11:28,997 [wrapper] Test setup, not cleaning
[2026-01-10 10:11:29] 2026-01-10 15:11:29,029 [wrapper] apfmon messages muted
[2026-01-10 10:11:29] 2026-01-10 15:11:29,049 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:11:29] 2026-01-10 15:11:29,059 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:11:29]  *** Error codes and diagnostics ***
[2026-01-10 10:11:29]     "exeErrorCode": 0,
[2026-01-10 10:11:29]     "exeErrorDiag": "",
[2026-01-10 10:11:29]     "pilotErrorCode": 0,
[2026-01-10 10:11:29]     "pilotErrorDiag": "",
[2026-01-10 10:11:29]  *** Listing of results directory ***
[2026-01-10 10:11:29] total 434864
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:11:29] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:11:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:20 run_atlas
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:20 job.xml
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas 393996253 Jan 10 08:20 EVNT.47962006._000098.pool.root.1
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 10:11:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:20 shared
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 08:20 input.tar.gz
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:20 boinc_lockfile
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 08:21 pandaJob.out
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:11:29] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:50 boinc_task_state.xml
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas      6861 Jan 10 10:01 init_data.xml
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas  43141176 Jan 10 10:09 HITS.47962010._002373.pool.root.1
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas      1045 Jan 10 10:10 memory_monitor_summary.json
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas   1331950 Jan 10 10:10 log.47962010._002373.job.log.tgz.1
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas        95 Jan 10 10:10 pilot_heartbeat.json
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas      8565 Jan 10 10:10 heartbeat.json
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas      4823 Jan 10 10:11 pilotlog.txt
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:11 wrapper_checkpoint.txt
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas    789754 Jan 10 10:11 log.47962010._002373.job.log.1
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:11 boinc_mmap_file
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas       353 Jan 10 10:11 output.list
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:11 runtime_log
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas   2140160 Jan 10 10:11 result.tar.gz
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 10:11 runtime_log.err
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas       653 Jan 10 10:11 QuGODmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyomKDmyG4KWn.diag
[2026-01-10 10:11:29] -rw-r--r--. 1 boincer umatlas     21342 Jan 10 10:11 stderr.txt
[2026-01-10 10:11:29] HITS file was successfully produced:
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas 43141176 Jan 10 10:09 shared/HITS.pool.root.1
[2026-01-10 10:11:29]  *** Contents of shared directory: ***
[2026-01-10 10:11:29] total 429588
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas 393996253 Jan 10 08:20 ATLAS.root_0
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 10:11:29] -rw-r--r--. 2 boincer umatlas    592613 Jan 10 08:20 input.tar.gz
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas  43141176 Jan 10 10:09 HITS.pool.root.1
[2026-01-10 10:11:29] -rw-------. 1 boincer umatlas   2140160 Jan 10 10:11 result.tar.gz
10:11:31 (408681): run_atlas exited; CPU time 16192.403394
10:11:31 (408681): called boinc_finish(0)

</stderr_txt>
]]>

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