Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:00:17 (372606): wrapper (7.7.26015): starting
09:00:17 (372606): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 09:00:17] Arguments: --nthreads 9
[2026-01-10 09:00:17] Threads: 9
[2026-01-10 09:00:17] Checking for CVMFS
[2026-01-10 09:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:00:18] 2.13.3.0 12525 94807 165604 154981 3 168 39779446 40960000 17435 16776704 0 531219371 99.654 496049789 35661 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 09:00:18] CVMFS is ok
[2026-01-10 09:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:00:18] Further information can be found at the LHC@home message board.
[2026-01-10 09:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:00:18] Checking for apptainer binary...
[2026-01-10 09:00:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:00:18] Running /usr/bin/apptainer --version
[2026-01-10 09:00:18] apptainer version 1.4.5-2.el9
[2026-01-10 09:00:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:00:19] c7-4-30.aglt2.org
[2026-01-10 09:00:19] apptainer works
[2026-01-10 09:00:19] Set ATHENA_PROC_NUMBER=9
[2026-01-10 09:00:19] Set ATHENA_CORE_NUMBER=9
[2026-01-10 09:00:19] Starting ATLAS job with PandaID=6965384218
[2026-01-10 09:00:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:16:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:16:40] 2026-01-10 16:15:38,857 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:16:40] 2026-01-10 16:15:38,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:16:40] 2026-01-10 16:15:38,866 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:16:40] 2026-01-10 16:15:38,866 | INFO     | sum of square deviations: 681330448.1230773
[2026-01-10 11:16:40] 2026-01-10 16:15:38,867 | INFO     | sum of deviations: 57032025110.61531
[2026-01-10 11:16:40] 2026-01-10 16:15:38,867 | INFO     | mean x: 1768057744.5538461
[2026-01-10 11:16:40] 2026-01-10 16:15:38,882 | INFO     | mean y: 2309097.769230769
[2026-01-10 11:16:40] 2026-01-10 16:15:38,883 | INFO     | intersect: -147996233991.2629
[2026-01-10 11:16:40] 2026-01-10 16:15:38,883 | INFO     | chi2: 17.369852183737507
[2026-01-10 11:16:40] 2026-01-10 16:15:38,883 | INFO     | sum of square deviations: 605752204.8480012
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | sum of deviations: 89763190588.016
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | mean x: 1768057592.096
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | mean y: 2374886.832
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | intersect: -261996655970.55533
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | chi2: 14.214240878964796
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | current chi2=14.214240878964796 (change=18.167174201557952 %)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | right removable region: 124
[2026-01-10 11:16:40] 2026-01-10 16:15:38,884 | INFO     | sum of square deviations: 605668634.8480012
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | sum of deviations: 13108002824.295994
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | mean x: 1768057897.096
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | mean y: 2397616.392
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | intersect: -38262268201.19551
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | chi2: 11.196991904270261
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | current chi2=11.196991904270261 (change=35.53778244150273 %)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,885 | INFO     | sum of square deviations: 535820883.59166616
[2026-01-10 11:16:40] 2026-01-10 16:15:38,886 | INFO     | sum of deviations: -25642826527.091652
[2026-01-10 11:16:40] 2026-01-10 16:15:38,886 | INFO     | mean x: 1768058049.6416667
[2026-01-10 11:16:40] 2026-01-10 16:15:38,886 | INFO     | mean y: 2482341.8583333334
[2026-01-10 11:16:40] 2026-01-10 16:15:38,886 | INFO     | intersect: 84616589863.91614
[2026-01-10 11:16:40] 2026-01-10 16:15:38,903 | INFO     | chi2: 6.766941097331985
[2026-01-10 11:16:40] 2026-01-10 16:15:38,903 | INFO     | current chi2=6.766941097331985 (change=39.564651335049746 %)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,903 | INFO     | sum of square deviations: 471554631.7913045
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | sum of deviations: -55376946103.2087
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | mean x: 1768058202.1913044
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | mean y: 2552622.191304348
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | intersect: 207634197333.542
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | chi2: 4.153996745301174
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | current chi2=4.153996745301174 (change=38.61337514909095 %)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,904 | INFO     | sum of square deviations: 412693070.2181828
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | sum of deviations: -58028592868.10909
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | mean x: 1768058354.6727273
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | mean y: 2559465.6636363636
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | intersect: 248608474694.9186
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | chi2: 3.978119423466793
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | current chi2=3.978119423466793 (change=4.233930179009547 %)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | left removable region: 40
[2026-01-10 11:16:40] 2026-01-10 16:15:38,905 | INFO     | sum of square deviations: 183778020.95238054
[2026-01-10 11:16:40] 2026-01-10 16:15:38,906 | INFO     | sum of deviations: -23336797249.619045
[2026-01-10 11:16:40] 2026-01-10 16:15:38,906 | INFO     | mean x: 1768058781.8095238
[2026-01-10 11:16:40] 2026-01-10 16:15:38,906 | INFO     | mean y: 2656828.273809524
[2026-01-10 11:16:40] 2026-01-10 16:15:38,906 | INFO     | intersect: 224517150469.42883
[2026-01-10 11:16:40] 2026-01-10 16:15:38,906 | INFO     | chi2: 0.5913500536754565
[2026-01-10 11:16:40] 2026-01-10 16:15:38,919 | INFO     | current memory leak: -126.98 B/s (using 84 data points, chi2=0.59)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | could have reported an average CPU frequency of 3187 MHz (8 samples)
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | ..............................
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | . Timing measurements:
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | . get job = 0 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | . initial setup = 4 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | . payload setup = 45 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,920 | INFO     | . stage-in = 0 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,921 | INFO     | . payload execution = 7927 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,921 | INFO     | . stage-out = 2 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,921 | INFO     | . log creation = 1 s
[2026-01-10 11:16:40] 2026-01-10 16:15:38,921 | INFO     | ..............................
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | 
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | job summary report
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | --------------------------------------------------
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | PanDA job id: 6965384218
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | task id: 47962010
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | errors: (none)
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | pilot state: finished 
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | transexitcode: 0
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | exeerrorcode: 0
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | exeerrordiag: 
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | exitcode: 0
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | exitmsg: OK
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | cpuconsumptiontime: 11452 s
[2026-01-10 11:16:40] 2026-01-10 16:15:39,252 | INFO     | nevents: 50
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | neventsw: 0
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | pid: 386729
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | pgrp: 386729
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | corecount: 9
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | event service: False
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | sizes: {0: 2284396, 1: 2284595, 12: 2284595, 23: 2284623, 31: 2284913, 34: 2284941, 7977: 2313611, 7978: 2313610, 7981: 2322660, 7983: 2322716, 8002: 2322962}
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | --------------------------------------------------
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | 
[2026-01-10 11:16:40] 2026-01-10 16:15:39,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 11:16:40] 2026-01-10 16:15:39,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | job 6965384218 has completed (purged errors)
[2026-01-10 11:16:40] 2026-01-10 16:15:39,562 | INFO     | overall cleanup function is called
[2026-01-10 11:16:40] 2026-01-10 16:15:40,631 | INFO     | --- collectZombieJob: --- 10, [386729]
[2026-01-10 11:16:40] 2026-01-10 16:15:40,631 | INFO     | zombie collector waiting for pid 386729
[2026-01-10 11:16:40] 2026-01-10 16:15:40,632 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:16:40] 2026-01-10 16:15:40,632 | INFO     | collected zombie processes
[2026-01-10 11:16:40] 2026-01-10 16:15:40,632 | INFO     | will attempt to kill all subprocesses of pid=386729
[2026-01-10 11:16:40] 2026-01-10 16:15:41,520 | INFO     | process IDs to be killed: [386729] (in reverse order)
[2026-01-10 11:16:40] 2026-01-10 16:15:41,679 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:16:40] 2026-01-10 16:15:41,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:16:40] 2026-01-10 16:15:41,765 | INFO     | did not find any defunct processes belonging to 386729
[2026-01-10 11:16:40] 2026-01-10 16:15:41,813 | INFO     | did not find any defunct processes belonging to 386729
[2026-01-10 11:16:40] 2026-01-10 16:15:41,814 | INFO     | ready for new job
[2026-01-10 11:16:40] 2026-01-10 16:15:41,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:16:40] 2026-01-10 16:15:41,816 | INFO     | ***************************************
[2026-01-10 11:16:40] 2026-01-10 16:15:41,816 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:16:40] 2026-01-10 16:15:41,816 | INFO     | ***************************************
[2026-01-10 11:16:40] 2026-01-10 16:15:41,816 | INFO     | 
[2026-01-10 11:16:40] 2026-01-10 16:15:41,831 | INFO     | architecture information:
[2026-01-10 11:16:40] 2026-01-10 16:15:41,849 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:16:40] 2026-01-10 16:15:41,890 | INFO     | cat /etc/os-release:
[2026-01-10 11:16:40] NAME="CentOS Linux"
[2026-01-10 11:16:40] VERSION="7 (Core)"
[2026-01-10 11:16:40] ID="centos"
[2026-01-10 11:16:40] ID_LIKE="rhel fedora"
[2026-01-10 11:16:40] VERSION_ID="7"
[2026-01-10 11:16:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:16:40] ANSI_COLOR="0;31"
[2026-01-10 11:16:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:16:40] HOME_URL="https://www.centos.org/"
[2026-01-10 11:16:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:16:40] 
[2026-01-10 11:16:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:16:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:16:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:16:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:16:40] 
[2026-01-10 11:16:40] 2026-01-10 16:15:41,890 | INFO     | ***************************************
[2026-01-10 11:16:40] 2026-01-10 16:15:42,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 11:16:40] 2026-01-10 16:15:42,437 | INFO     | sufficient remaining disk space (128072024064 B)
[2026-01-10 11:16:40] 2026-01-10 16:15:42,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:16:40] 2026-01-10 16:15:42,443 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:16:40] 2026-01-10 16:15:42,443 | INFO     | update_server=False
[2026-01-10 11:16:40] 2026-01-10 16:15:42,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:16:40] 2026-01-10 16:15:42,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:16:40] 2026-01-10 16:15:42,444 | INFO     | aborting loop
[2026-01-10 11:16:40] 2026-01-10 16:15:42,839 | INFO     | all data control threads have been joined
[2026-01-10 11:16:40] 2026-01-10 16:15:42,937 | INFO     | all payload control threads have been joined
[2026-01-10 11:16:40] 2026-01-10 16:15:43,240 | INFO     | all job control threads have been joined
[2026-01-10 11:16:40] 2026-01-10 16:15:43,312 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:16:40] 2026-01-10 16:15:43,449 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,450 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,659 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,792 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,845 | INFO     | [data] control thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:16:40] 2026-01-10 16:15:43,849 | INFO     | [job] validate thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,855 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:43,943 | INFO     | [payload] control thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:44,035 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:44,247 | INFO     | [job] control thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:44,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:16:40] 2026-01-10 16:15:44,527 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:44,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:44,704 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:45,282 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:45,319 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:15:47,856 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:16:40] 2026-01-10 16:16:11,636 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-10 11:16:40] 2026-01-10 16:16:13,095 | INFO     | PID=378713 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 11:16:40] 2026-01-10 16:16:13,097 | INFO     | .. there are 14 such processes running
[2026-01-10 11:16:40] 2026-01-10 16:16:13,098 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:16:40] 2026-01-10 16:16:13,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:16:40] 2026-01-10 16:16:13,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:16:40] 2026-01-10 16:16:32,756 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:16:40] 2026-01-10 16:16:33,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629486667584)>', '<ExcThread(monitor, started 140628696491776)>']
[2026-01-10 11:16:40] 2026-01-10 16:16:34,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:16:40] 2026-01-10 16:16:34,220 | INFO     | [monitor] control thread has ended
[2026-01-10 11:16:40] 2026-01-10 16:16:38,537 | INFO     | all workflow threads have been joined
[2026-01-10 11:16:40] 2026-01-10 16:16:38,537 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:16:40] 2026-01-10 16:16:38,538 | INFO     | traces error code: 0
[2026-01-10 11:16:40] 2026-01-10 16:16:38,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:16:40] 2026-01-10 16:16:39,206 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:16:40] 2026-01-10 16:16:39,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:16:40] 2026-01-10 16:16:39,290 [wrapper] pilotpid: 378713
[2026-01-10 11:16:40] 2026-01-10 16:16:39,339 [wrapper] Pilot exit status: 0
[2026-01-10 11:16:40] 2026-01-10 16:16:39,530 [wrapper] pandaids: 6965384218
[2026-01-10 11:16:40] 2026-01-10 16:16:39,818 [wrapper] cleanup supervisor_pilot  711902 378714
[2026-01-10 11:16:40] 2026-01-10 16:16:39,834 [wrapper] Test setup, not cleaning
[2026-01-10 11:16:40] 2026-01-10 16:16:39,855 [wrapper] apfmon messages muted
[2026-01-10 11:16:40] 2026-01-10 16:16:39,878 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:16:40] 2026-01-10 16:16:39,881 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:16:40]  *** Error codes and diagnostics ***
[2026-01-10 11:16:40]     "exeErrorCode": 0,
[2026-01-10 11:16:40]     "exeErrorDiag": "",
[2026-01-10 11:16:40]     "pilotErrorCode": 0,
[2026-01-10 11:16:40]     "pilotErrorDiag": "",
[2026-01-10 11:16:40]  *** Listing of results directory ***
[2026-01-10 11:16:40] total 439336
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 11:16:40] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:16:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:00 run_atlas
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:00 job.xml
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas 396135850 Jan 10 09:00 EVNT.47962006._000096.pool.root.1
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:00 start_atlas.sh
[2026-01-10 11:16:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:00 shared
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 09:00 input.tar.gz
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:00 boinc_lockfile
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 09:00 pandaJob.out
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas        57 Jan 10 09:00 setup.sh.local
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas    989556 Jan 10 09:01 agis_schedconf.cvmfs.json
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:01 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:16:40] drwx------. 5 boincer umatlas      4096 Jan 10 09:01 pilot3
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas       530 Jan 10 10:46 boinc_task_state.xml
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas      6946 Jan 10 11:11 init_data.xml
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas  44913732 Jan 10 11:14 HITS.47962010._002359.pool.root.1
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas      1031 Jan 10 11:15 memory_monitor_summary.json
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas   1353318 Jan 10 11:15 log.47962010._002359.job.log.tgz.1
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas      8531 Jan 10 11:15 heartbeat.json
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas        95 Jan 10 11:16 pilot_heartbeat.json
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas        27 Jan 10 11:16 wrapper_checkpoint.txt
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas      4824 Jan 10 11:16 pilotlog.txt
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas   1102070 Jan 10 11:16 log.47962010._002359.job.log.1
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 11:16 boinc_mmap_file
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas       353 Jan 10 11:16 output.list
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas       620 Jan 10 11:16 runtime_log
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas   2478080 Jan 10 11:16 result.tar.gz
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas       652 Jan 10 11:16 u48NDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmromKDmJrAQ5n.diag
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 11:16 runtime_log.err
[2026-01-10 11:16:40] -rw-r--r--. 1 boincer umatlas     21009 Jan 10 11:16 stderr.txt
[2026-01-10 11:16:40] HITS file was successfully produced:
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas 44913732 Jan 10 11:14 shared/HITS.pool.root.1
[2026-01-10 11:16:40]  *** Contents of shared directory: ***
[2026-01-10 11:16:40] total 433732
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas 396135850 Jan 10 09:00 ATLAS.root_0
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:00 start_atlas.sh
[2026-01-10 11:16:40] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 09:00 input.tar.gz
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas  44913732 Jan 10 11:14 HITS.pool.root.1
[2026-01-10 11:16:40] -rw-------. 1 boincer umatlas   2478080 Jan 10 11:16 result.tar.gz
11:16:42 (372606): run_atlas exited; CPU time 11509.639405
11:16:42 (372606): called boinc_finish(0)

</stderr_txt>
]]>

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