Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:48 (16178): wrapper (7.7.26015): starting
08:21:48 (16178): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:21:48] Arguments: --nthreads 8
[2026-01-10 08:21:48] Threads: 8
[2026-01-10 08:21:48] Checking for CVMFS
[2026-01-10 08:21:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:49] 2.11.2.0 14221 182521 139220 154981 3 1 10458506 18432000 1 130560 0 123062046 99.980 7009547 32190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:21:49] CVMFS is ok
[2026-01-10 08:21:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:49] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:49] Checking for apptainer binary...
[2026-01-10 08:21:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:49] Running /usr/bin/apptainer --version
[2026-01-10 08:21:49] apptainer version 1.3.2-1.el7
[2026-01-10 08:21:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:50] c-206-9.aglt2.org
[2026-01-10 08:21:50] apptainer works
[2026-01-10 08:21:50] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:21:50] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:21:50] Starting ATLAS job with PandaID=6965384181
[2026-01-10 08:21:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:38:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:38:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:38:25]  replicas=None
[2026-01-10 09:38:25]  scope=mc16_13TeV
[2026-01-10 09:38:25]  status=None
[2026-01-10 09:38:25]  status_code=0
[2026-01-10 09:38:25]  storage_token=
[2026-01-10 09:38:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965384181/log.47962010._002322.job.log.tgz.1
[2026-01-10 09:38:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5b/54/log.47962010._002322.job.log.tgz.1
[2026-01-10 09:38:25]  workdir=None
[2026-01-10 09:38:25] ]
[2026-01-10 09:38:25] 2026-01-10 14:38:03,760 | INFO     | transferring file log.47962010._002322.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384181/log.47962010._002322.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:38:25] 2026-01-10 14:38:03,760 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384181/log.47962010._002322.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002322.job
[2026-01-10 09:38:25] 2026-01-10 14:38:03,782 | INFO     | adding to output.list: log.47962010._002322.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/5b/54/log.47962010._002322.job.log.tgz.
[2026-01-10 09:38:25] 2026-01-10 14:38:03,783 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:38:25] 2026-01-10 14:38:03,783 | INFO     | summary of transferred files:
[2026-01-10 09:38:25] 2026-01-10 14:38:03,783 | INFO     |  -- lfn=log.47962010._002322.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:38:25] 2026-01-10 14:38:03,784 | INFO     | stage-out finished correctly
[2026-01-10 09:38:25] 2026-01-10 14:38:04,770 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:38:25] 2026-01-10 14:38:05,310 | INFO     | time since job start (4559s) is within the limit (349056.0s)
[2026-01-10 09:38:25] 2026-01-10 14:38:05,592 | WARNING  | process 6669 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:38:25] 2026-01-10 14:38:05,593 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384181/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:38:25] 2026-01-10 14:38:05,689 | INFO     | number of running child processes to parent process 6669: 1
[2026-01-10 09:38:25] 2026-01-10 14:38:05,690 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:38:25] 2026-01-10 14:38:06,210 | INFO     | job 6965384181 has state=finished
[2026-01-10 09:38:25] 2026-01-10 14:38:06,211 | INFO     | preparing for final server update for job 6965384181 in state='finished'
[2026-01-10 09:38:25] 2026-01-10 14:38:06,211 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:38:25] 2026-01-10 14:38:06,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:38:25] 2026-01-10 14:38:06,211 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:38:25] 2026-01-10 14:38:06,212 | INFO     | job 6965384181 has finished - writing final server update
[2026-01-10 09:38:25] 2026-01-10 14:38:06,212 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:38:25] 2026-01-10 14:38:06,213 | INFO     | executing command: lscpu
[2026-01-10 09:38:25] 2026-01-10 14:38:06,241 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:38:25] 2026-01-10 14:38:07,315 | INFO     | time since job start (4561s) is within the limit (349056.0s)
[2026-01-10 09:38:25] 2026-01-10 14:38:08,193 | INFO     | monitor loop #335: job 0:6965384181 is in state 'finished'
[2026-01-10 09:38:25] 2026-01-10 14:38:08,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:38:25] 2026-01-10 14:38:09,321 | INFO     | time since job start (4563s) is within the limit (349056.0s)
[2026-01-10 09:38:25] 2026-01-10 14:38:10,696 | INFO     | monitor loop #336: job 0:6965384181 is in state 'finished'
[2026-01-10 09:38:25] 2026-01-10 14:38:10,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:38:25] 2026-01-10 14:38:10,803 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:38:25] 2026-01-10 14:38:10,808 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1657.0
[2026-01-10 09:38:25] 2026-01-10 14:38:10,811 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384181/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:38:25] 2026-01-10 14:38:10,812 | INFO     | extracted standard info from prmon json
[2026-01-10 09:38:25] 2026-01-10 14:38:10,812 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:38:25] 2026-01-10 14:38:10,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:38:25] 2026-01-10 14:38:10,814 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:38:25] 2026-01-10 14:38:10,814 | INFO     | sum of square deviations: 97467829.76470585
[2026-01-10 09:38:25] 2026-01-10 14:38:10,814 | INFO     | sum of deviations: -890900079.9411753
[2026-01-10 09:38:25] 2026-01-10 14:38:10,814 | INFO     | mean x: 1768053704.0588236
[2026-01-10 09:38:25] 2026-01-10 14:38:10,815 | INFO     | mean y: 2516756.9852941176
[2026-01-10 09:38:25] 2026-01-10 14:38:10,815 | INFO     | intersect: 16163327868.598648
[2026-01-10 09:38:25] 2026-01-10 14:38:10,815 | INFO     | chi2: 0.33593245194345134
[2026-01-10 09:38:25] 2026-01-10 14:38:10,815 | INFO     | current memory leak: -9.14 B/s (using 68 data points, chi2=0.34)
[2026-01-10 09:38:25] 2026-01-10 14:38:10,815 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | ..............................
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . Timing measurements:
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . get job = 0 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . initial setup = 3 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . payload setup = 7 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . stage-in = 0 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . payload execution = 4528 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . stage-out = 0 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | . log creation = 0 s
[2026-01-10 09:38:25] 2026-01-10 14:38:10,816 | INFO     | ..............................
[2026-01-10 09:38:25] 2026-01-10 14:38:11,326 | INFO     | time since job start (4565s) is within the limit (349056.0s)
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | 
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | job summary report
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | --------------------------------------------------
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | PanDA job id: 6965384181
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | task id: 47962010
[2026-01-10 09:38:25] 2026-01-10 14:38:11,347 | INFO     | errors: (none)
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | pilot state: finished 
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | transexitcode: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | exeerrorcode: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | exeerrordiag: 
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | exitcode: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | exitmsg: OK
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | cpuconsumptiontime: 31856 s
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | nevents: 50
[2026-01-10 09:38:25] 2026-01-10 14:38:11,348 | INFO     | neventsw: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | pid: 6669
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | pgrp: 6669
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | corecount: 8
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | event service: False
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | sizes: {0: 2284398, 1: 2284597, 5: 2284859, 11: 2284915, 4539: 2311789, 4541: 2320783, 4542: 2320967, 4548: 2321213}
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | --------------------------------------------------
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | 
[2026-01-10 09:38:25] 2026-01-10 14:38:11,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:38:25] 2026-01-10 14:38:11,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,375 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:38:25] 2026-01-10 14:38:11,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,376 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:38:25] 2026-01-10 14:38:11,376 | INFO     | job 6965384181 has completed (purged errors)
[2026-01-10 09:38:25] 2026-01-10 14:38:11,376 | INFO     | overall cleanup function is called
[2026-01-10 09:38:25] 2026-01-10 14:38:12,389 | INFO     | --- collectZombieJob: --- 10, [6669]
[2026-01-10 09:38:25] 2026-01-10 14:38:12,389 | INFO     | zombie collector waiting for pid 6669
[2026-01-10 09:38:25] 2026-01-10 14:38:12,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:38:25] 2026-01-10 14:38:12,389 | INFO     | collected zombie processes
[2026-01-10 09:38:25] 2026-01-10 14:38:12,390 | INFO     | will attempt to kill all subprocesses of pid=6669
[2026-01-10 09:38:25] 2026-01-10 14:38:12,489 | INFO     | process IDs to be killed: [6669] (in reverse order)
[2026-01-10 09:38:25] 2026-01-10 14:38:12,540 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:38:25] 2026-01-10 14:38:12,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:38:25] 2026-01-10 14:38:12,544 | INFO     | did not find any defunct processes belonging to 6669
[2026-01-10 09:38:25] 2026-01-10 14:38:12,548 | INFO     | did not find any defunct processes belonging to 6669
[2026-01-10 09:38:25] 2026-01-10 14:38:12,548 | INFO     | ready for new job
[2026-01-10 09:38:25] 2026-01-10 14:38:12,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:38:25] 2026-01-10 14:38:12,549 | INFO     | ***************************************
[2026-01-10 09:38:25] 2026-01-10 14:38:12,550 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:38:25] 2026-01-10 14:38:12,550 | INFO     | ***************************************
[2026-01-10 09:38:25] 2026-01-10 14:38:12,550 | INFO     | 
[2026-01-10 09:38:25] 2026-01-10 14:38:12,551 | INFO     | architecture information:
[2026-01-10 09:38:25] 2026-01-10 14:38:12,551 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:38:25] 2026-01-10 14:38:12,566 | INFO     | cat /etc/os-release:
[2026-01-10 09:38:25] NAME="CentOS Linux"
[2026-01-10 09:38:25] VERSION="7 (Core)"
[2026-01-10 09:38:25] ID="centos"
[2026-01-10 09:38:25] ID_LIKE="rhel fedora"
[2026-01-10 09:38:25] VERSION_ID="7"
[2026-01-10 09:38:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:38:25] ANSI_COLOR="0;31"
[2026-01-10 09:38:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:38:25] HOME_URL="https://www.centos.org/"
[2026-01-10 09:38:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:38:25] 
[2026-01-10 09:38:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:38:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:38:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:38:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:38:25] 
[2026-01-10 09:38:25] 2026-01-10 14:38:12,566 | INFO     | ***************************************
[2026-01-10 09:38:25] 2026-01-10 14:38:13,069 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:38:25] 2026-01-10 14:38:13,088 | INFO     | sufficient remaining disk space (29259464704 B)
[2026-01-10 09:38:25] 2026-01-10 14:38:13,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:38:25] 2026-01-10 14:38:13,089 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:38:25] 2026-01-10 14:38:13,089 | INFO     | update_server=False
[2026-01-10 09:38:25] 2026-01-10 14:38:13,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:38:25] 2026-01-10 14:38:13,090 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 09:38:25] 2026-01-10 14:38:13,090 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:38:25] 2026-01-10 14:38:13,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:38:25] 2026-01-10 14:38:13,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:38:25] 2026-01-10 14:38:13,155 | INFO     | all job control threads have been joined
[2026-01-10 09:38:25] 2026-01-10 14:38:13,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:38:25] 2026-01-10 14:38:13,199 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:38:25] 2026-01-10 14:38:13,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:25] 2026-01-10 14:38:13,200 | INFO     | will abort loop
[2026-01-10 09:38:25] 2026-01-10 14:38:13,744 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:38:25] 2026-01-10 14:38:13,793 | INFO     | all payload control threads have been joined
[2026-01-10 09:38:25] 2026-01-10 14:38:14,095 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,150 | INFO     | all data control threads have been joined
[2026-01-10 09:38:25] 2026-01-10 14:38:14,160 | INFO     | [job] control thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,205 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,226 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,335 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:38:25] 2026-01-10 14:38:14,618 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,799 | INFO     | [payload] control thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:14,936 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,155 | INFO     | [data] control thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:38:25] 2026-01-10 14:38:15,381 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,398 | INFO     | [job] validate thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,565 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:15,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:25] 2026-01-10 14:38:16,382 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:16,915 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:19,371 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:38:25] 2026-01-10 14:38:19,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226111174464)>', '<ExcThread(monitor, started 140225682585344)>']
[2026-01-10 09:38:25] 2026-01-10 14:38:20,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:38:25] 2026-01-10 14:38:20,125 | INFO     | [monitor] control thread has ended
[2026-01-10 09:38:25] 2026-01-10 14:38:24,908 | INFO     | all workflow threads have been joined
[2026-01-10 09:38:25] 2026-01-10 14:38:24,908 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:38:25] 2026-01-10 14:38:24,908 | INFO     | traces error code: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:24,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:38:25] 2026-01-10 14:38:24,990 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:38:25] 2026-01-10 14:38:24,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:38:25] 2026-01-10 14:38:24,997 [wrapper] pilotpid: 20516
[2026-01-10 09:38:25] 2026-01-10 14:38:25,001 [wrapper] Pilot exit status: 0
[2026-01-10 09:38:25] 2026-01-10 14:38:25,013 [wrapper] pandaids: 6965384181
[2026-01-10 09:38:25] 2026-01-10 14:38:25,052 [wrapper] cleanup supervisor_pilot  5530 20517
[2026-01-10 09:38:25] 2026-01-10 14:38:25,056 [wrapper] Test setup, not cleaning
[2026-01-10 09:38:25] 2026-01-10 14:38:25,060 [wrapper] apfmon messages muted
[2026-01-10 09:38:25] 2026-01-10 14:38:25,064 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:38:25] 2026-01-10 14:38:25,068 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:38:25]  *** Error codes and diagnostics ***
[2026-01-10 09:38:25]     "exeErrorCode": 0,
[2026-01-10 09:38:25]     "exeErrorDiag": "",
[2026-01-10 09:38:25]     "pilotErrorCode": 0,
[2026-01-10 09:38:25]     "pilotErrorDiag": "",
[2026-01-10 09:38:25]  *** Listing of results directory ***
[2026-01-10 09:38:25] total 434696
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:38:25] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:38:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas 392320194 Jan 10 08:21 EVNT.47962006._000088.pool.root.1
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:38:25] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:21 shared
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas    592625 Jan 10 08:21 input.tar.gz
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:21 boinc_lockfile
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:38:25] drwx------ 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas      5949 Jan 10 09:29 init_data.xml
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:30 boinc_task_state.xml
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas        95 Jan 10 09:37 pilot_heartbeat.json
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas  45095359 Jan 10 09:37 HITS.47962010._002322.pool.root.1
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas      1052 Jan 10 09:37 memory_monitor_summary.json
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas   1213243 Jan 10 09:38 log.47962010._002322.job.log.tgz.1
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas      8593 Jan 10 09:38 heartbeat.json
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:38 boinc_mmap_file
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:38 wrapper_checkpoint.txt
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas      4738 Jan 10 09:38 pilotlog.txt
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas    681593 Jan 10 09:38 log.47962010._002322.job.log.1
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas       353 Jan 10 09:38 output.list
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:38 runtime_log
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas   1914880 Jan 10 09:38 result.tar.gz
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas      9337 Jan 10 09:38 runtime_log.err
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas       657 Jan 10 09:38 40mNDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZomKDmJ74HPn.diag
[2026-01-10 09:38:25] -rw-r--r-- 1 boincer umatlas     21896 Jan 10 09:38 stderr.txt
[2026-01-10 09:38:25] HITS file was successfully produced:
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas 45095359 Jan 10 09:37 shared/HITS.pool.root.1
[2026-01-10 09:38:25]  *** Contents of shared directory: ***
[2026-01-10 09:38:25] total 429640
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas 392320194 Jan 10 08:21 ATLAS.root_0
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:38:25] -rw-r--r-- 2 boincer umatlas    592625 Jan 10 08:21 input.tar.gz
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas  45095359 Jan 10 09:37 HITS.pool.root.1
[2026-01-10 09:38:25] -rw------- 1 boincer umatlas   1914880 Jan 10 09:38 result.tar.gz
09:38:26 (16178): run_atlas exited; CPU time 31746.861874
09:38:26 (16178): called boinc_finish(0)

</stderr_txt>
]]>

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