Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:55 (3442621): wrapper (7.7.26015): starting
08:38:55 (3442621): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:38:55] Arguments: --nthreads 9
[2026-01-10 08:38:55] Threads: 9
[2026-01-10 08:38:55] Checking for CVMFS
[2026-01-10 08:38:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:38:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:38:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:38:57] 2.13.3.0 6683 15499 158592 154981 2 134 34352461 40960001 20373 16776704 0 21871209 99.764 16235629 39906 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:38:57] CVMFS is ok
[2026-01-10 08:38:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:38:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:38:57] Further information can be found at the LHC@home message board.
[2026-01-10 08:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:38:57] Checking for apptainer binary...
[2026-01-10 08:38:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:38:57] Running /usr/bin/apptainer --version
[2026-01-10 08:38:57] apptainer version 1.4.5-2.el9
[2026-01-10 08:38:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:38:57] c-211-35-3.aglt2.org
[2026-01-10 08:38:57] apptainer works
[2026-01-10 08:38:58] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:38:58] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:38:58] Starting ATLAS job with PandaID=6965384183
[2026-01-10 08:38:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:36:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:36:14] 2026-01-10 14:34:29,382 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:36:14] 2026-01-10 14:34:29,410 | INFO     | executing command: lscpu
[2026-01-10 09:36:14] 2026-01-10 14:34:29,574 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:36:14] 2026-01-10 14:34:30,275 | INFO     | monitor loop #236: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:30,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:31,247 | INFO     | time since job start (3290s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:32,779 | INFO     | monitor loop #237: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:32,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:33,253 | INFO     | time since job start (3292s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:35,260 | INFO     | time since job start (3294s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:35,284 | INFO     | monitor loop #238: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:35,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:37,269 | INFO     | time since job start (3296s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:37,789 | INFO     | monitor loop #239: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:37,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:39,276 | INFO     | time since job start (3298s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:40,311 | INFO     | monitor loop #240: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:40,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:41,088 | INFO     | PID=3447074 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:36:14] 2026-01-10 14:34:41,088 | INFO     | .. there are 16 such processes running
[2026-01-10 09:36:14] 2026-01-10 14:34:42,089 | INFO     | time since job start (3301s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:42,816 | INFO     | monitor loop #241: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:42,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:44,097 | INFO     | time since job start (3303s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:45,324 | INFO     | monitor loop #242: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:45,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:46,104 | INFO     | time since job start (3305s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:47,829 | INFO     | monitor loop #243: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:47,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:48,112 | INFO     | time since job start (3307s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:50,119 | INFO     | time since job start (3309s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:50,336 | INFO     | monitor loop #244: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:50,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:52,126 | INFO     | time since job start (3311s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:52,841 | INFO     | monitor loop #245: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:52,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:54,135 | INFO     | time since job start (3313s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:55,346 | INFO     | monitor loop #246: job 0:6965384183 is in state 'finished'
[2026-01-10 09:36:14] 2026-01-10 14:34:55,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:36:14] 2026-01-10 14:34:56,143 | INFO     | time since job start (3315s) is within the limit (349056.0s)
[2026-01-10 09:36:14] 2026-01-10 14:34:56,578 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:36:14] 2026-01-10 14:34:56,637 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2727.8298958333335
[2026-01-10 09:36:14] 2026-01-10 14:34:56,697 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384183/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:36:14] 2026-01-10 14:34:56,697 | INFO     | extracted standard info from prmon json
[2026-01-10 09:36:14] 2026-01-10 14:34:56,697 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:36:14] 2026-01-10 14:34:56,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:36:14] 2026-01-10 14:34:56,707 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:36:14] 2026-01-10 14:34:56,707 | INFO     | sum of square deviations: 30209517.739130437
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | sum of deviations: -3323726689.478261
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | mean x: 1768054158.6956522
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | mean y: 2757893.1086956523
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | intersect: 194528497974.285
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | chi2: 0.38383378342950847
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | current memory leak: -110.02 B/s (using 46 data points, chi2=0.38)
[2026-01-10 09:36:14] 2026-01-10 14:34:56,708 | INFO     | could have reported an average CPU frequency of 2705 MHz (5 samples)
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | ..............................
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . Timing measurements:
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . get job = 0 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . initial setup = 4 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . payload setup = 28 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . stage-in = 0 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . payload execution = 3202 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . stage-out = 2 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | . log creation = 0 s
[2026-01-10 09:36:14] 2026-01-10 14:34:56,709 | INFO     | ..............................
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | 
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | job summary report
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | --------------------------------------------------
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | PanDA job id: 6965384183
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | task id: 47962010
[2026-01-10 09:36:14] 2026-01-10 14:34:57,011 | INFO     | errors: (none)
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | pilot state: finished 
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | transexitcode: 0
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | exeerrorcode: 0
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | exeerrordiag: 
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | exitcode: 0
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | exitmsg: OK
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | cpuconsumptiontime: 15638 s
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | nevents: 50
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | neventsw: 0
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | pid: 3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | pgrp: 3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | corecount: 9
[2026-01-10 09:36:14] 2026-01-10 14:34:57,012 | INFO     | event service: False
[2026-01-10 09:36:14] 2026-01-10 14:34:57,013 | INFO     | sizes: {0: 2283741, 1: 2284426, 2: 2284625, 13: 2284625, 24: 2284971, 3234: 2311246, 3235: 2311373, 3238: 2320423, 3239: 2320479, 3269: 2320757}
[2026-01-10 09:36:14] 2026-01-10 14:34:57,013 | INFO     | --------------------------------------------------
[2026-01-10 09:36:14] 2026-01-10 14:34:57,013 | INFO     | 
[2026-01-10 09:36:14] 2026-01-10 14:34:57,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:36:14] 2026-01-10 14:34:57,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:36:14] 2026-01-10 14:34:57,065 | INFO     | job 6965384183 has completed (purged errors)
[2026-01-10 09:36:14] 2026-01-10 14:34:57,065 | INFO     | overall cleanup function is called
[2026-01-10 09:36:14] 2026-01-10 14:34:58,092 | INFO     | --- collectZombieJob: --- 10, [3459429]
[2026-01-10 09:36:14] 2026-01-10 14:34:58,093 | INFO     | zombie collector waiting for pid 3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:58,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:36:14] 2026-01-10 14:34:58,093 | INFO     | collected zombie processes
[2026-01-10 09:36:14] 2026-01-10 14:34:58,093 | INFO     | will attempt to kill all subprocesses of pid=3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:58,943 | INFO     | process IDs to be killed: [3459429] (in reverse order)
[2026-01-10 09:36:14] 2026-01-10 14:34:59,057 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:36:14] 2026-01-10 14:34:59,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:36:14] 2026-01-10 14:34:59,071 | INFO     | did not find any defunct processes belonging to 3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:59,086 | INFO     | did not find any defunct processes belonging to 3459429
[2026-01-10 09:36:14] 2026-01-10 14:34:59,086 | INFO     | ready for new job
[2026-01-10 09:36:14] 2026-01-10 14:34:59,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:36:14] 2026-01-10 14:34:59,088 | INFO     | ***************************************
[2026-01-10 09:36:14] 2026-01-10 14:34:59,088 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:36:14] 2026-01-10 14:34:59,088 | INFO     | ***************************************
[2026-01-10 09:36:14] 2026-01-10 14:34:59,088 | INFO     | 
[2026-01-10 09:36:14] 2026-01-10 14:34:59,094 | INFO     | architecture information:
[2026-01-10 09:36:14] 2026-01-10 14:34:59,094 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:36:14] 2026-01-10 14:34:59,120 | INFO     | cat /etc/os-release:
[2026-01-10 09:36:14] NAME="CentOS Linux"
[2026-01-10 09:36:14] VERSION="7 (Core)"
[2026-01-10 09:36:14] ID="centos"
[2026-01-10 09:36:14] ID_LIKE="rhel fedora"
[2026-01-10 09:36:14] VERSION_ID="7"
[2026-01-10 09:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:36:14] ANSI_COLOR="0;31"
[2026-01-10 09:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:36:14] HOME_URL="https://www.centos.org/"
[2026-01-10 09:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:36:14] 
[2026-01-10 09:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:36:14] 
[2026-01-10 09:36:14] 2026-01-10 14:34:59,120 | INFO     | ***************************************
[2026-01-10 09:36:14] 2026-01-10 14:34:59,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:36:14] 2026-01-10 14:34:59,659 | INFO     | sufficient remaining disk space (125968580608 B)
[2026-01-10 09:36:14] 2026-01-10 14:34:59,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:36:14] 2026-01-10 14:34:59,659 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:36:14] 2026-01-10 14:34:59,659 | INFO     | update_server=False
[2026-01-10 09:36:14] 2026-01-10 14:34:59,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:36:14] 2026-01-10 14:34:59,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:36:14] 2026-01-10 14:34:59,660 | INFO     | aborting loop
[2026-01-10 09:36:14] 2026-01-10 14:34:59,685 | INFO     | all data control threads have been joined
[2026-01-10 09:36:14] 2026-01-10 14:35:00,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:36:14] 2026-01-10 14:35:00,666 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:00,668 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:00,669 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:00,693 | INFO     | [data] control thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:00,785 | INFO     | all job control threads have been joined
[2026-01-10 09:36:14] 2026-01-10 14:35:00,786 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:00,960 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:36:14] 2026-01-10 14:35:01,187 | INFO     | all payload control threads have been joined
[2026-01-10 09:36:14] 2026-01-10 14:35:01,444 | INFO     | [job] validate thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,791 | INFO     | [job] control thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,941 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:01,942 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:02,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:36:14] 2026-01-10 14:35:02,195 | INFO     | [payload] control thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:03,035 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:03,162 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:04,242 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:36:14] 2026-01-10 14:35:29,934 | INFO     | PID=3447074 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:36:14] 2026-01-10 14:35:29,934 | INFO     | .. there are 16 such processes running
[2026-01-10 09:36:14] 2026-01-10 14:35:29,935 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:36:14] 2026-01-10 14:35:29,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:36:14] 2026-01-10 14:35:29,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:36:14] 2026-01-10 14:35:47,118 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:36:14] 2026-01-10 14:35:47,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773379684160)>', '<ExcThread(monitor, started 139772932650752)>']
[2026-01-10 09:36:14] 2026-01-10 14:35:48,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:36:14] 2026-01-10 14:35:48,046 | INFO     | [monitor] control thread has ended
[2026-01-10 09:36:14] 2026-01-10 14:35:52,517 | INFO     | all workflow threads have been joined
[2026-01-10 09:36:14] 2026-01-10 14:35:52,518 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:36:14] 2026-01-10 14:35:52,518 | INFO     | traces error code: 0
[2026-01-10 09:36:14] 2026-01-10 14:35:52,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:36:14] 2026-01-10 14:35:52,938 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:36:14] 2026-01-10 14:35:52,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:36:14] 2026-01-10 14:35:52,963 [wrapper] pilotpid: 3447074
[2026-01-10 09:36:14] 2026-01-10 14:35:53,020 [wrapper] Pilot exit status: 0
[2026-01-10 09:36:14] 2026-01-10 14:35:53,089 [wrapper] pandaids: 6965384183
[2026-01-10 09:36:14] 2026-01-10 14:35:53,722 [wrapper] cleanup supervisor_pilot 3547828 3447075
[2026-01-10 09:36:14] 2026-01-10 14:35:53,746 [wrapper] Test setup, not cleaning
[2026-01-10 09:36:14] 2026-01-10 14:35:53,765 [wrapper] apfmon messages muted
[2026-01-10 09:36:14] 2026-01-10 14:35:53,780 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:36:14] 2026-01-10 14:35:53,796 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:36:14]  *** Error codes and diagnostics ***
[2026-01-10 09:36:14]     "exeErrorCode": 0,
[2026-01-10 09:36:14]     "exeErrorDiag": "",
[2026-01-10 09:36:14]     "pilotErrorCode": 0,
[2026-01-10 09:36:14]     "pilotErrorDiag": "",
[2026-01-10 09:36:14]  *** Listing of results directory ***
[2026-01-10 09:36:14] total 433496
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:36:14] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:36:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:38 run_atlas
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:38 job.xml
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:38 EVNT.47962006._000088.pool.root.1
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:38 start_atlas.sh
[2026-01-10 09:36:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:38 shared
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas    592623 Jan 10 08:38 input.tar.gz
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:38 boinc_lockfile
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:38 pandaJob.out
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas        57 Jan 10 08:38 setup.sh.local
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas    989556 Jan 10 08:39 agis_schedconf.cvmfs.json
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:39 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:36:14] drwx------. 5 boincer umatlas      4096 Jan 10 08:39 pilot3
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:27 boinc_task_state.xml
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas      6858 Jan 10 09:28 init_data.xml
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas  44073519 Jan 10 09:34 HITS.47962010._002324.pool.root.1
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas      1049 Jan 10 09:34 memory_monitor_summary.json
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas   1295784 Jan 10 09:34 log.47962010._002324.job.log.tgz.1
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas        95 Jan 10 09:34 pilot_heartbeat.json
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas      8567 Jan 10 09:34 heartbeat.json
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas      4825 Jan 10 09:35 pilotlog.txt
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas    493033 Jan 10 09:35 log.47962010._002324.job.log.1
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas       353 Jan 10 09:35 output.list
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:35 runtime_log
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas   1812480 Jan 10 09:35 result.tar.gz
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 09:35 runtime_log.err
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas       653 Jan 10 09:35 nMoNDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaomKDmYJj4Xn.diag
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:36 wrapper_checkpoint.txt
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:36 boinc_mmap_file
[2026-01-10 09:36:14] -rw-r--r--. 1 boincer umatlas     22510 Jan 10 09:36 stderr.txt
[2026-01-10 09:36:14] HITS file was successfully produced:
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas 44073519 Jan 10 09:34 shared/HITS.pool.root.1
[2026-01-10 09:36:14]  *** Contents of shared directory: ***
[2026-01-10 09:36:14] total 428544
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas 392320194 Jan 10 08:38 ATLAS.root_0
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:38 start_atlas.sh
[2026-01-10 09:36:14] -rw-r--r--. 2 boincer umatlas    592623 Jan 10 08:38 input.tar.gz
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas  44073519 Jan 10 09:34 HITS.pool.root.1
[2026-01-10 09:36:14] -rw-------. 1 boincer umatlas   1812480 Jan 10 09:35 result.tar.gz
09:36:16 (3442621): run_atlas exited; CPU time 15704.645587
09:36:16 (3442621): called boinc_finish(0)

</stderr_txt>
]]>

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