Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:48 (31566): wrapper (7.7.26015): starting
08:17:48 (31566): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:17:48] Arguments: --nthreads 8
[2026-01-10 08:17:48] Threads: 8
[2026-01-10 08:17:48] Checking for CVMFS
[2026-01-10 08:17:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:17:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:17:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:17:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:17:49] 2.11.2.0 4329 31192 155272 154981 3 11 6370953 18432000 1833 130560 0 8491809 99.803 2048299 23125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:17:49] CVMFS is ok
[2026-01-10 08:17:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:17:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:17:49] Further information can be found at the LHC@home message board.
[2026-01-10 08:17:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:17:49] Checking for apptainer binary...
[2026-01-10 08:17:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:17:49] Running /usr/bin/apptainer --version
[2026-01-10 08:17:49] apptainer version 1.3.2-1.el7
[2026-01-10 08:17:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:17:49] c-206-17.aglt2.org
[2026-01-10 08:17:49] apptainer works
[2026-01-10 08:17:49] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:17:49] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:17:49] Starting ATLAS job with PandaID=6965384171
[2026-01-10 08:17:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:38:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:38:14]  is_altstaged=None
[2026-01-10 09:38:14]  is_tar=False
[2026-01-10 09:38:14]  lfn=log.47962010._002312.job.log.tgz.1
[2026-01-10 09:38:14]  mtime=0
[2026-01-10 09:38:14]  protocol_id=None
[2026-01-10 09:38:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:38:14]  replicas=None
[2026-01-10 09:38:14]  scope=mc16_13TeV
[2026-01-10 09:38:14]  status=None
[2026-01-10 09:38:14]  status_code=0
[2026-01-10 09:38:14]  storage_token=
[2026-01-10 09:38:14]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965384171/log.47962010._002312.job.log.tgz.1
[2026-01-10 09:38:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ce/ef/log.47962010._002312.job.log.tgz.1
[2026-01-10 09:38:14]  workdir=None
[2026-01-10 09:38:14] ]
[2026-01-10 09:38:14] 2026-01-10 14:37:32,100 | INFO     | transferring file log.47962010._002312.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965384171/log.47962010._002312.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:38:14] 2026-01-10 14:37:32,100 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965384171/log.47962010._002312.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002312.job
[2026-01-10 09:38:14] 2026-01-10 14:37:32,124 | INFO     | adding to output.list: log.47962010._002312.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ce/ef/log.47962010._002312.job.log.tgz.
[2026-01-10 09:38:14] 2026-01-10 14:37:32,125 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:38:14] 2026-01-10 14:37:32,125 | INFO     | summary of transferred files:
[2026-01-10 09:38:14] 2026-01-10 14:37:32,125 | INFO     |  -- lfn=log.47962010._002312.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:38:14] 2026-01-10 14:37:32,126 | INFO     | stage-out finished correctly
[2026-01-10 09:38:14] 2026-01-10 14:37:32,266 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:38:14] 2026-01-10 14:37:32,779 | INFO     | monitor loop #349: job 0:6965384171 is in state 'finished'
[2026-01-10 09:38:14] 2026-01-10 14:37:32,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:38:14] 2026-01-10 14:37:33,688 | INFO     | job 6965384171 has state=finished
[2026-01-10 09:38:14] 2026-01-10 14:37:33,688 | INFO     | preparing for final server update for job 6965384171 in state='finished'
[2026-01-10 09:38:14] 2026-01-10 14:37:33,689 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:38:14] 2026-01-10 14:37:33,689 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:38:14] 2026-01-10 14:37:33,689 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:38:14] 2026-01-10 14:37:33,689 | INFO     | job 6965384171 has finished - writing final server update
[2026-01-10 09:38:14] 2026-01-10 14:37:33,690 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:38:14] 2026-01-10 14:37:33,691 | INFO     | executing command: lscpu
[2026-01-10 09:38:14] 2026-01-10 14:37:33,719 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:38:14] 2026-01-10 14:37:33,813 | INFO     | time since job start (4772s) is within the limit (349056.0s)
[2026-01-10 09:38:14] 2026-01-10 14:37:35,285 | INFO     | monitor loop #350: job 0:6965384171 is in state 'finished'
[2026-01-10 09:38:14] 2026-01-10 14:37:35,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:38:14] 2026-01-10 14:37:35,819 | INFO     | time since job start (4774s) is within the limit (349056.0s)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,433 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:38:14] 2026-01-10 14:37:37,443 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.7083333333335
[2026-01-10 09:38:14] 2026-01-10 14:37:37,453 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384171/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,454 | INFO     | extracted standard info from prmon json
[2026-01-10 09:38:14] 2026-01-10 14:37:37,454 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:38:14] 2026-01-10 14:37:37,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:38:14] 2026-01-10 14:37:37,457 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:38:14] 2026-01-10 14:37:37,457 | INFO     | sum of square deviations: 110965849.1549296
[2026-01-10 09:38:14] 2026-01-10 14:37:37,458 | INFO     | sum of deviations: -7393994461.774647
[2026-01-10 09:38:14] 2026-01-10 14:37:37,458 | INFO     | mean x: 1768053547.5915494
[2026-01-10 09:38:14] 2026-01-10 14:37:37,458 | INFO     | mean y: 2956289.0422535213
[2026-01-10 09:38:14] 2026-01-10 14:37:37,458 | INFO     | intersect: 117813780417.10846
[2026-01-10 09:38:14] 2026-01-10 14:37:37,459 | INFO     | chi2: 0.5877771606054849
[2026-01-10 09:38:14] 2026-01-10 14:37:37,459 | INFO     | current memory leak: -66.63 B/s (using 71 data points, chi2=0.59)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,459 | INFO     | could have reported an average CPU frequency of 2479 MHz (6 samples)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,459 | INFO     | ..............................
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . Timing measurements:
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . get job = 0 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . initial setup = 2 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . payload setup = 5 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . stage-in = 0 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,460 | INFO     | . payload execution = 4746 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,461 | INFO     | . stage-out = 0 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,461 | INFO     | . log creation = 0 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,461 | INFO     | ..............................
[2026-01-10 09:38:14] 2026-01-10 14:37:37,614 | INFO     | 
[2026-01-10 09:38:14] 2026-01-10 14:37:37,614 | INFO     | job summary report
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | --------------------------------------------------
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | PanDA job id: 6965384171
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | task id: 47962010
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | errors: (none)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:38:14] 2026-01-10 14:37:37,615 | INFO     | pilot state: finished 
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | transexitcode: 0
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | exeerrorcode: 0
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | exeerrordiag: 
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | exitcode: 0
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | exitmsg: OK
[2026-01-10 09:38:14] 2026-01-10 14:37:37,616 | INFO     | cpuconsumptiontime: 32653 s
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | nevents: 50
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | neventsw: 0
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | pid: 9779
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | pgrp: 9779
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | corecount: 8
[2026-01-10 09:38:14] 2026-01-10 14:37:37,617 | INFO     | event service: False
[2026-01-10 09:38:14] 2026-01-10 14:37:37,618 | INFO     | sizes: {0: 2284398, 1: 2284597, 4: 2284859, 11: 2284887, 4754: 2311902, 4756: 2321080, 4761: 2321270}
[2026-01-10 09:38:14] 2026-01-10 14:37:37,618 | INFO     | --------------------------------------------------
[2026-01-10 09:38:14] 2026-01-10 14:37:37,618 | INFO     | 
[2026-01-10 09:38:14] 2026-01-10 14:37:37,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:38:14] 2026-01-10 14:37:37,634 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,634 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,636 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,638 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:38:14] 2026-01-10 14:37:37,638 | INFO     | job 6965384171 has completed (purged errors)
[2026-01-10 09:38:14] 2026-01-10 14:37:37,638 | INFO     | overall cleanup function is called
[2026-01-10 09:38:14] 2026-01-10 14:37:38,654 | INFO     | --- collectZombieJob: --- 10, [9779]
[2026-01-10 09:38:14] 2026-01-10 14:37:38,654 | INFO     | zombie collector waiting for pid 9779
[2026-01-10 09:38:14] 2026-01-10 14:37:38,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:38:14] 2026-01-10 14:37:38,654 | INFO     | collected zombie processes
[2026-01-10 09:38:14] 2026-01-10 14:37:38,655 | INFO     | will attempt to kill all subprocesses of pid=9779
[2026-01-10 09:38:14] 2026-01-10 14:37:38,818 | INFO     | process IDs to be killed: [9779] (in reverse order)
[2026-01-10 09:38:14] 2026-01-10 14:37:38,873 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:38:14] 2026-01-10 14:37:38,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:38:14] 2026-01-10 14:37:38,879 | INFO     | did not find any defunct processes belonging to 9779
[2026-01-10 09:38:14] 2026-01-10 14:37:38,884 | INFO     | did not find any defunct processes belonging to 9779
[2026-01-10 09:38:14] 2026-01-10 14:37:38,884 | INFO     | ready for new job
[2026-01-10 09:38:14] 2026-01-10 14:37:38,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:38:14] 2026-01-10 14:37:38,886 | INFO     | ***************************************
[2026-01-10 09:38:14] 2026-01-10 14:37:38,886 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:38:14] 2026-01-10 14:37:38,887 | INFO     | ***************************************
[2026-01-10 09:38:14] 2026-01-10 14:37:38,887 | INFO     | 
[2026-01-10 09:38:14] 2026-01-10 14:37:38,888 | INFO     | architecture information:
[2026-01-10 09:38:14] 2026-01-10 14:37:38,888 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:38:14] 2026-01-10 14:37:38,903 | INFO     | cat /etc/os-release:
[2026-01-10 09:38:14] NAME="CentOS Linux"
[2026-01-10 09:38:14] VERSION="7 (Core)"
[2026-01-10 09:38:14] ID="centos"
[2026-01-10 09:38:14] ID_LIKE="rhel fedora"
[2026-01-10 09:38:14] VERSION_ID="7"
[2026-01-10 09:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:38:14] ANSI_COLOR="0;31"
[2026-01-10 09:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:38:14] HOME_URL="https://www.centos.org/"
[2026-01-10 09:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:38:14] 
[2026-01-10 09:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:38:14] 
[2026-01-10 09:38:14] 2026-01-10 14:37:38,903 | INFO     | ***************************************
[2026-01-10 09:38:14] 2026-01-10 14:37:39,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:38:14] 2026-01-10 14:37:39,423 | INFO     | sufficient remaining disk space (27955036160 B)
[2026-01-10 09:38:14] 2026-01-10 14:37:39,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:38:14] 2026-01-10 14:37:39,424 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:38:14] 2026-01-10 14:37:39,424 | INFO     | update_server=False
[2026-01-10 09:38:14] 2026-01-10 14:37:39,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:38:14] 2026-01-10 14:37:39,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:14] 2026-01-10 14:37:39,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:38:14] 2026-01-10 14:37:39,425 | INFO     | aborting loop
[2026-01-10 09:38:14] 2026-01-10 14:37:39,590 | INFO     | all job control threads have been joined
[2026-01-10 09:38:14] 2026-01-10 14:37:39,776 | INFO     | all data control threads have been joined
[2026-01-10 09:38:14] 2026-01-10 14:37:39,877 | INFO     | all payload control threads have been joined
[2026-01-10 09:38:14] 2026-01-10 14:37:40,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:38:14] 2026-01-10 14:37:40,426 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,430 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,431 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,554 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,596 | INFO     | [job] control thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,610 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,782 | INFO     | [data] control thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,883 | INFO     | [payload] control thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:40,886 | INFO     | [job] validate thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:41,285 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:41,360 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:41,660 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:41,854 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:42,294 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:42,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:38:14] 2026-01-10 14:37:46,898 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:37:50,476 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:38:14] 2026-01-10 14:37:51,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:38:14] 2026-01-10 14:38:07,881 | INFO     | 4779s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 09:38:14] 2026-01-10 14:38:08,260 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:38:14] 2026-01-10 14:38:09,079 | INFO     | PID=3073 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 09:38:14] 2026-01-10 14:38:09,079 | INFO     | .. there are 3 such processes running
[2026-01-10 09:38:14] 2026-01-10 14:38:09,080 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:38:14] 2026-01-10 14:38:09,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:38:14] 2026-01-10 14:38:09,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:38:14] 2026-01-10 14:38:09,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165333473088)>', '<ExcThread(monitor, started 140164881954560)>']
[2026-01-10 09:38:14] 2026-01-10 14:38:10,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:38:14] 2026-01-10 14:38:10,086 | INFO     | [monitor] control thread has ended
[2026-01-10 09:38:14] 2026-01-10 14:38:14,274 | INFO     | all workflow threads have been joined
[2026-01-10 09:38:14] 2026-01-10 14:38:14,274 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:38:14] 2026-01-10 14:38:14,275 | INFO     | traces error code: 0
[2026-01-10 09:38:14] 2026-01-10 14:38:14,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:38:14] 2026-01-10 14:38:14,402 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:38:14] 2026-01-10 14:38:14,404 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:38:14] 2026-01-10 14:38:14,407 [wrapper] pilotpid: 3073
[2026-01-10 09:38:14] 2026-01-10 14:38:14,409 [wrapper] Pilot exit status: 0
[2026-01-10 09:38:14] 2026-01-10 14:38:14,416 [wrapper] pandaids: 6965384171
[2026-01-10 09:38:14] 2026-01-10 14:38:14,443 [wrapper] cleanup supervisor_pilot 16355 3074
[2026-01-10 09:38:14] 2026-01-10 14:38:14,448 [wrapper] Test setup, not cleaning
[2026-01-10 09:38:14] 2026-01-10 14:38:14,450 [wrapper] apfmon messages muted
[2026-01-10 09:38:14] 2026-01-10 14:38:14,454 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:38:14] 2026-01-10 14:38:14,458 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:38:14]  *** Error codes and diagnostics ***
[2026-01-10 09:38:14]     "exeErrorCode": 0,
[2026-01-10 09:38:14]     "exeErrorDiag": "",
[2026-01-10 09:38:14]     "pilotErrorCode": 0,
[2026-01-10 09:38:14]     "pilotErrorDiag": "",
[2026-01-10 09:38:14]  *** Listing of results directory ***
[2026-01-10 09:38:14] total 433224
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:38:14] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:38:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:17 run_atlas
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:17 job.xml
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas 393071051 Jan 10 08:17 EVNT.47962006._000086.pool.root.1
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:17 start_atlas.sh
[2026-01-10 09:38:14] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:17 shared
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 08:17 input.tar.gz
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:17 boinc_lockfile
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:17 pandaJob.out
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas        57 Jan 10 08:17 setup.sh.local
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas    989556 Jan 10 08:17 agis_schedconf.cvmfs.json
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas   1516240 Jan 10 08:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:38:14] drwx------ 5 boincer umatlas      4096 Jan 10 08:18 pilot3
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:26 boinc_task_state.xml
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 09:36 init_data.xml
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas  42790011 Jan 10 09:37 HITS.47962010._002312.pool.root.1
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas      1049 Jan 10 09:37 memory_monitor_summary.json
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas   1209930 Jan 10 09:37 log.47962010._002312.job.log.tgz.1
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas        95 Jan 10 09:37 pilot_heartbeat.json
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas      8611 Jan 10 09:37 heartbeat.json
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:37 boinc_mmap_file
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:37 wrapper_checkpoint.txt
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas      5007 Jan 10 09:38 pilotlog.txt
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas    711031 Jan 10 09:38 log.47962010._002312.job.log.1
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas       353 Jan 10 09:38 output.list
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:38 runtime_log
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas   1945600 Jan 10 09:38 result.tar.gz
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas       659 Jan 10 09:38 xygNDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUomKDmUNDINo.diag
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 09:38 runtime_log.err
[2026-01-10 09:38:14] -rw-r--r-- 1 boincer umatlas     21522 Jan 10 09:38 stderr.txt
[2026-01-10 09:38:14] HITS file was successfully produced:
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas 42790011 Jan 10 09:37 shared/HITS.pool.root.1
[2026-01-10 09:38:14]  *** Contents of shared directory: ***
[2026-01-10 09:38:14] total 428144
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas 393071051 Jan 10 08:17 ATLAS.root_0
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:17 start_atlas.sh
[2026-01-10 09:38:14] -rw-r--r-- 2 boincer umatlas    592613 Jan 10 08:17 input.tar.gz
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas  42790011 Jan 10 09:37 HITS.pool.root.1
[2026-01-10 09:38:14] -rw------- 1 boincer umatlas   1945600 Jan 10 09:38 result.tar.gz
09:38:16 (31566): run_atlas exited; CPU time 32601.151705
09:38:16 (31566): called boinc_finish(0)

</stderr_txt>
]]>

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