Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:04 (28119): wrapper (7.7.26015): starting
08:19:04 (28119): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 08:19:04] Arguments: --nthreads 12
[2026-01-10 08:19:04] Threads: 12
[2026-01-10 08:19:04] Checking for CVMFS
[2026-01-10 08:19:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:19:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:19:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:19:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:19:05] 2.11.2.0 3081 352486 95436 154981 1 1 17893907 20275200 1 130560 1 149208433 99.952 20516063 16271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:19:05] CVMFS is ok
[2026-01-10 08:19:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:19:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:19:05] Further information can be found at the LHC@home message board.
[2026-01-10 08:19:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:19:05] Checking for apptainer binary...
[2026-01-10 08:19:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:19:05] Running /usr/bin/apptainer --version
[2026-01-10 08:19:05] apptainer version 1.3.2-1.el7
[2026-01-10 08:19:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:19:06] c-205-29.aglt2.org
[2026-01-10 08:19:06] apptainer works
[2026-01-10 08:19:06] Set ATHENA_PROC_NUMBER=12
[2026-01-10 08:19:06] Set ATHENA_CORE_NUMBER=12
[2026-01-10 08:19:06] Starting ATLAS job with PandaID=6965384162
[2026-01-10 08:19:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 08:54:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 08:54:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 08:54:32]  replicas=None
[2026-01-10 08:54:32]  scope=mc16_13TeV
[2026-01-10 08:54:32]  status=None
[2026-01-10 08:54:32]  status_code=0
[2026-01-10 08:54:32]  storage_token=
[2026-01-10 08:54:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965384162/log.47962010._002303.job.log.tgz.1
[2026-01-10 08:54:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ef/26/log.47962010._002303.job.log.tgz.1
[2026-01-10 08:54:32]  workdir=None
[2026-01-10 08:54:32] ]
[2026-01-10 08:54:32] 2026-01-10 13:53:34,569 | INFO     | transferring file log.47962010._002303.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384162/log.47962010._002303.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 08:54:32] 2026-01-10 13:53:34,569 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384162/log.47962010._002303.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002303.job
[2026-01-10 08:54:32] 2026-01-10 13:53:34,593 | INFO     | adding to output.list: log.47962010._002303.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ef/26/log.47962010._002303.job.log.tgz.
[2026-01-10 08:54:32] 2026-01-10 13:53:34,593 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 08:54:32] 2026-01-10 13:53:34,594 | INFO     | summary of transferred files:
[2026-01-10 08:54:32] 2026-01-10 13:53:34,594 | INFO     |  -- lfn=log.47962010._002303.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 08:54:32] 2026-01-10 13:53:34,594 | INFO     | stage-out finished correctly
[2026-01-10 08:54:32] 2026-01-10 13:53:34,776 | INFO     | time since job start (2051s) is within the limit (349056.0s)
[2026-01-10 08:54:32] 2026-01-10 13:53:36,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 08:54:32] 2026-01-10 13:53:36,128 | INFO     | monitor loop #161: job 0:6965384162 is in state 'finished'
[2026-01-10 08:54:32] 2026-01-10 13:53:36,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:54:32] 2026-01-10 13:53:36,782 | INFO     | time since job start (2053s) is within the limit (349056.0s)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,201 | INFO     | job 6965384162 has state=finished
[2026-01-10 08:54:32] 2026-01-10 13:53:38,202 | INFO     | preparing for final server update for job 6965384162 in state='finished'
[2026-01-10 08:54:32] 2026-01-10 13:53:38,254 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,254 | INFO     | this job has now completed (state=finished)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,254 | INFO     | log transfer has been attempted: DONE
[2026-01-10 08:54:32] 2026-01-10 13:53:38,254 | INFO     | job 6965384162 has finished - writing final server update
[2026-01-10 08:54:32] 2026-01-10 13:53:38,255 | INFO     | total number of processed events: 50 (read)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,256 | INFO     | executing command: lscpu
[2026-01-10 08:54:32] 2026-01-10 13:53:38,281 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 08:54:32] 2026-01-10 13:53:38,630 | INFO     | monitor loop #162: job 0:6965384162 is in state 'finished'
[2026-01-10 08:54:32] 2026-01-10 13:53:38,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:54:32] 2026-01-10 13:53:38,786 | INFO     | time since job start (2055s) is within the limit (349056.0s)
[2026-01-10 08:54:32] 2026-01-10 13:53:40,792 | INFO     | time since job start (2057s) is within the limit (349056.0s)
[2026-01-10 08:54:32] 2026-01-10 13:53:41,132 | INFO     | monitor loop #163: job 0:6965384162 is in state 'finished'
[2026-01-10 08:54:32] 2026-01-10 13:53:41,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 08:54:32] 2026-01-10 13:53:42,798 | INFO     | time since job start (2059s) is within the limit (349056.0s)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,035 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 08:54:32] 2026-01-10 13:53:43,039 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-10 08:54:32] 2026-01-10 13:53:43,042 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384162/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,043 | INFO     | extracted standard info from prmon json
[2026-01-10 08:54:32] 2026-01-10 13:53:43,043 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 08:54:32] 2026-01-10 13:53:43,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | fitting pss+swap vs Time
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | sum of square deviations: 6093900.962962963
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | sum of deviations: -5022067267.8148155
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | mean x: 1768052291.0370371
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | mean y: 2781193.814814815
[2026-01-10 08:54:32] 2026-01-10 13:53:43,045 | INFO     | intersect: 1457078895913.7422
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | chi2: 1.245177541833433
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | current memory leak: -824.11 B/s (using 27 data points, chi2=1.25)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | could have reported an average CPU frequency of 1762 MHz (5 samples)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | ..............................
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | . Timing measurements:
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | . get job = 0 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,046 | INFO     | . initial setup = 2 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | . payload setup = 8 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | . stage-in = 0 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | . payload execution = 2023 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | . stage-out = 0 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | . log creation = 0 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,047 | INFO     | ..............................
[2026-01-10 08:54:32] 2026-01-10 13:53:43,128 | INFO     | 
[2026-01-10 08:54:32] 2026-01-10 13:53:43,128 | INFO     | job summary report
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | --------------------------------------------------
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | PanDA job id: 6965384162
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | task id: 47962010
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | errors: (none)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 08:54:32] 2026-01-10 13:53:43,129 | INFO     | pilot state: finished 
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | transexitcode: 0
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | exeerrorcode: 0
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | exeerrordiag: 
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | exitcode: 0
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | exitmsg: OK
[2026-01-10 08:54:32] 2026-01-10 13:53:43,130 | INFO     | cpuconsumptiontime: 16805 s
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | nevents: 50
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | neventsw: 0
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | pid: 6267
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | pgrp: 6267
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | corecount: 12
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | event service: False
[2026-01-10 08:54:32] 2026-01-10 13:53:43,131 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2034: 2310696, 2035: 2319690, 2037: 2319746, 2044: 2320152}
[2026-01-10 08:54:32] 2026-01-10 13:53:43,132 | INFO     | --------------------------------------------------
[2026-01-10 08:54:32] 2026-01-10 13:53:43,132 | INFO     | 
[2026-01-10 08:54:32] 2026-01-10 13:53:43,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 08:54:32] 2026-01-10 13:53:43,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,159 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 08:54:32] 2026-01-10 13:53:43,160 | INFO     | job 6965384162 has completed (purged errors)
[2026-01-10 08:54:32] 2026-01-10 13:53:43,160 | INFO     | overall cleanup function is called
[2026-01-10 08:54:32] 2026-01-10 13:53:44,175 | INFO     | --- collectZombieJob: --- 10, [6267]
[2026-01-10 08:54:32] 2026-01-10 13:53:44,176 | INFO     | zombie collector waiting for pid 6267
[2026-01-10 08:54:32] 2026-01-10 13:53:44,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 08:54:32] 2026-01-10 13:53:44,176 | INFO     | collected zombie processes
[2026-01-10 08:54:32] 2026-01-10 13:53:44,176 | INFO     | will attempt to kill all subprocesses of pid=6267
[2026-01-10 08:54:32] 2026-01-10 13:53:44,266 | INFO     | process IDs to be killed: [6267] (in reverse order)
[2026-01-10 08:54:32] 2026-01-10 13:53:44,315 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 08:54:32] 2026-01-10 13:53:44,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 08:54:32] 2026-01-10 13:53:44,319 | INFO     | did not find any defunct processes belonging to 6267
[2026-01-10 08:54:32] 2026-01-10 13:53:44,323 | INFO     | did not find any defunct processes belonging to 6267
[2026-01-10 08:54:32] 2026-01-10 13:53:44,323 | INFO     | ready for new job
[2026-01-10 08:54:32] 2026-01-10 13:53:44,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 08:54:32] 2026-01-10 13:53:44,325 | INFO     | ***************************************
[2026-01-10 08:54:32] 2026-01-10 13:53:44,325 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 08:54:32] 2026-01-10 13:53:44,325 | INFO     | ***************************************
[2026-01-10 08:54:32] 2026-01-10 13:53:44,325 | INFO     | 
[2026-01-10 08:54:32] 2026-01-10 13:53:44,325 | INFO     | architecture information:
[2026-01-10 08:54:32] 2026-01-10 13:53:44,326 | INFO     | executing command: cat /etc/os-release
[2026-01-10 08:54:32] 2026-01-10 13:53:44,341 | INFO     | cat /etc/os-release:
[2026-01-10 08:54:32] NAME="CentOS Linux"
[2026-01-10 08:54:32] VERSION="7 (Core)"
[2026-01-10 08:54:32] ID="centos"
[2026-01-10 08:54:32] ID_LIKE="rhel fedora"
[2026-01-10 08:54:32] VERSION_ID="7"
[2026-01-10 08:54:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 08:54:32] ANSI_COLOR="0;31"
[2026-01-10 08:54:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 08:54:32] HOME_URL="https://www.centos.org/"
[2026-01-10 08:54:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 08:54:32] 
[2026-01-10 08:54:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 08:54:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 08:54:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 08:54:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 08:54:32] 
[2026-01-10 08:54:32] 2026-01-10 13:53:44,341 | INFO     | ***************************************
[2026-01-10 08:54:32] 2026-01-10 13:53:44,844 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 08:54:32] 2026-01-10 13:53:44,860 | INFO     | sufficient remaining disk space (29151461376 B)
[2026-01-10 08:54:32] 2026-01-10 13:53:44,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 08:54:32] 2026-01-10 13:53:44,861 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 08:54:32] 2026-01-10 13:53:44,861 | INFO     | update_server=False
[2026-01-10 08:54:32] 2026-01-10 13:53:44,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 08:54:32] 2026-01-10 13:53:44,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:54:32] 2026-01-10 13:53:44,862 | INFO     | aborting loop
[2026-01-10 08:54:32] 2026-01-10 13:53:44,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 08:54:32] 2026-01-10 13:53:45,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 08:54:32] 2026-01-10 13:53:45,453 | INFO     | all job control threads have been joined
[2026-01-10 08:54:32] 2026-01-10 13:53:45,823 | INFO     | all payload control threads have been joined
[2026-01-10 08:54:32] 2026-01-10 13:53:45,836 | INFO     | all data control threads have been joined
[2026-01-10 08:54:32] 2026-01-10 13:53:45,867 | INFO     | [job] retrieve thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:45,868 | INFO     | [job] job monitor thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:45,868 | INFO     | [job] queue monitor thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:45,882 | INFO     | [data] copytool_in thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,065 | INFO     | [payload] validate_post thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,449 | INFO     | [payload] failed_post thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,450 | INFO     | [job] validate thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,458 | INFO     | [job] control thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 08:54:32] 2026-01-10 13:53:46,785 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,826 | INFO     | [payload] control thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,842 | INFO     | [data] control thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,863 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:46,883 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:47,191 | INFO     | [data] copytool_out thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:50,633 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:53:55,805 | INFO     | job.realtimelogging is not enabled
[2026-01-10 08:54:32] 2026-01-10 13:53:56,811 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 08:54:32] 2026-01-10 13:54:14,879 | INFO     | 2064s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 08:54:32] 2026-01-10 13:54:16,000 | INFO     | PID=32175 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 08:54:32] 2026-01-10 13:54:16,000 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 08:54:32] 2026-01-10 13:54:16,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 08:54:32] 2026-01-10 13:54:16,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 08:54:32] 2026-01-10 13:54:25,714 | INFO     | [monitor] cgroup control has ended
[2026-01-10 08:54:32] 2026-01-10 13:54:26,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140557530572608)>', '<ExcThread(monitor, started 140556403459840)>']
[2026-01-10 08:54:32] 2026-01-10 13:54:27,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 08:54:32] 2026-01-10 13:54:27,045 | INFO     | [monitor] control thread has ended
[2026-01-10 08:54:32] 2026-01-10 13:54:31,736 | INFO     | all workflow threads have been joined
[2026-01-10 08:54:32] 2026-01-10 13:54:31,736 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 08:54:32] 2026-01-10 13:54:31,737 | INFO     | traces error code: 0
[2026-01-10 08:54:32] 2026-01-10 13:54:31,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 08:54:32] 2026-01-10 13:54:31,819 [wrapper] ==== pilot stdout END ====
[2026-01-10 08:54:32] 2026-01-10 13:54:31,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 08:54:32] 2026-01-10 13:54:31,827 [wrapper] pilotpid: 32175
[2026-01-10 08:54:32] 2026-01-10 13:54:31,831 [wrapper] Pilot exit status: 0
[2026-01-10 08:54:32] 2026-01-10 13:54:31,845 [wrapper] pandaids: 6965384162
[2026-01-10 08:54:32] 2026-01-10 13:54:31,889 [wrapper] cleanup supervisor_pilot 19757 32176
[2026-01-10 08:54:32] 2026-01-10 13:54:31,892 [wrapper] Test setup, not cleaning
[2026-01-10 08:54:32] 2026-01-10 13:54:31,896 [wrapper] apfmon messages muted
[2026-01-10 08:54:32] 2026-01-10 13:54:31,900 [wrapper] ==== wrapper stdout END ====
[2026-01-10 08:54:32] 2026-01-10 13:54:31,904 [wrapper] ==== wrapper stderr END ====
[2026-01-10 08:54:32]  *** Error codes and diagnostics ***
[2026-01-10 08:54:32]     "exeErrorCode": 0,
[2026-01-10 08:54:32]     "exeErrorDiag": "",
[2026-01-10 08:54:32]     "pilotErrorCode": 0,
[2026-01-10 08:54:32]     "pilotErrorDiag": "",
[2026-01-10 08:54:32]  *** Listing of results directory ***
[2026-01-10 08:54:32] total 432476
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 08:54:32] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 08:54:32] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:19 run_atlas
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:19 job.xml
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas 393071051 Jan 10 08:19 EVNT.47962006._000086.pool.root.1
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:19 start_atlas.sh
[2026-01-10 08:54:32] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:19 shared
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas    592612 Jan 10 08:19 input.tar.gz
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:19 boinc_lockfile
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:19 pandaJob.out
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas        57 Jan 10 08:19 setup.sh.local
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas    989556 Jan 10 08:19 agis_schedconf.cvmfs.json
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas   1516240 Jan 10 08:19 agis_ddmendpoints.agis.ALL.json
[2026-01-10 08:54:32] drwx------ 5 boincer umatlas      4096 Jan 10 08:19 pilot3
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas       529 Jan 10 08:42 boinc_task_state.xml
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas  41981174 Jan 10 08:53 HITS.47962010._002303.pool.root.1
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas      1051 Jan 10 08:53 memory_monitor_summary.json
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas   1603920 Jan 10 08:53 log.47962010._002303.job.log.tgz.1
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas        95 Jan 10 08:53 pilot_heartbeat.json
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas      8613 Jan 10 08:53 heartbeat.json
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas      5953 Jan 10 08:54 init_data.xml
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 08:54 boinc_mmap_file
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas        27 Jan 10 08:54 wrapper_checkpoint.txt
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas      4933 Jan 10 08:54 pilotlog.txt
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas    337800 Jan 10 08:54 log.47962010._002303.job.log.1
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas       353 Jan 10 08:54 output.list
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas       620 Jan 10 08:54 runtime_log
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas   1966080 Jan 10 08:54 result.tar.gz
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas      9344 Jan 10 08:54 runtime_log.err
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas       659 Jan 10 08:54 GGbNDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPomKDmAPegmn.diag
[2026-01-10 08:54:32] -rw-r--r-- 1 boincer umatlas     21962 Jan 10 08:54 stderr.txt
[2026-01-10 08:54:32] HITS file was successfully produced:
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas 41981174 Jan 10 08:53 shared/HITS.pool.root.1
[2026-01-10 08:54:32]  *** Contents of shared directory: ***
[2026-01-10 08:54:32] total 427376
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas 393071051 Jan 10 08:19 ATLAS.root_0
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:19 start_atlas.sh
[2026-01-10 08:54:32] -rw-r--r-- 2 boincer umatlas    592612 Jan 10 08:19 input.tar.gz
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas  41981174 Jan 10 08:53 HITS.pool.root.1
[2026-01-10 08:54:32] -rw------- 1 boincer umatlas   1966080 Jan 10 08:54 result.tar.gz
08:54:33 (28119): run_atlas exited; CPU time 16463.949561
08:54:33 (28119): called boinc_finish(0)

</stderr_txt>
]]>

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