Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:32 (1312522): wrapper (7.7.26015): starting
08:18:32 (1312522): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 08:18:32] Arguments: --nthreads 12
[2026-01-10 08:18:32] Threads: 12
[2026-01-10 08:18:32] Checking for CVMFS
[2026-01-10 08:18:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:18:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:18:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:18:33] 2.13.3.0 5924 22999 178584 154981 1 54 20715296 39288833 5738 16776704 0 10403494 99.588 16125727 41985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:18:33] CVMFS is ok
[2026-01-10 08:18:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:18:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:18:33] Further information can be found at the LHC@home message board.
[2026-01-10 08:18:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:18:33] Checking for apptainer binary...
[2026-01-10 08:18:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:18:33] Running /usr/bin/apptainer --version
[2026-01-10 08:18:33] apptainer version 1.4.5-2.el9
[2026-01-10 08:18:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:18:33] c-210-3.aglt2.org
[2026-01-10 08:18:33] apptainer works
[2026-01-10 08:18:33] Set ATHENA_PROC_NUMBER=12
[2026-01-10 08:18:33] Set ATHENA_CORE_NUMBER=12
[2026-01-10 08:18:33] Starting ATLAS job with PandaID=6965384007
[2026-01-10 08:18:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:23:20]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:23:20] 2026-01-10 14:22:18,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:20,062 | INFO     | time since job start (3817s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:21,025 | INFO     | monitor loop #271: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:21,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:21,674 | INFO     | PID=1316202 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:23:20] 2026-01-10 14:22:21,675 | INFO     | .. there are 7 such processes running
[2026-01-10 09:23:20] 2026-01-10 14:22:22,678 | INFO     | time since job start (3819s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:23,530 | INFO     | monitor loop #272: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:23,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:24,685 | INFO     | time since job start (3821s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:26,036 | INFO     | monitor loop #273: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:26,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:26,693 | INFO     | time since job start (3823s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:28,541 | INFO     | monitor loop #274: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:28,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:28,701 | INFO     | time since job start (3825s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:30,710 | INFO     | time since job start (3827s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:31,048 | INFO     | monitor loop #275: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:31,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:32,717 | INFO     | time since job start (3829s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:33,553 | INFO     | monitor loop #276: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:33,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:34,724 | INFO     | time since job start (3831s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:36,063 | INFO     | monitor loop #277: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:36,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:36,731 | INFO     | time since job start (3833s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:38,571 | INFO     | monitor loop #278: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:38,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:38,740 | INFO     | time since job start (3835s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:40,748 | INFO     | time since job start (3837s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:41,079 | INFO     | monitor loop #279: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:41,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:42,757 | INFO     | time since job start (3839s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:43,587 | INFO     | monitor loop #280: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:43,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:44,184 | INFO     | PID=1316202 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:23:20] 2026-01-10 14:22:44,184 | INFO     | .. there are 7 such processes running
[2026-01-10 09:23:20] 2026-01-10 14:22:45,186 | INFO     | time since job start (3842s) is within the limit (349056.0s)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,093 | INFO     | monitor loop #281: job 0:6965384007 is in state 'finished'
[2026-01-10 09:23:20] 2026-01-10 14:22:46,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,264 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:23:20] 2026-01-10 14:22:46,278 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9295749999997
[2026-01-10 09:23:20] 2026-01-10 14:22:46,291 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384007/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,292 | INFO     | extracted standard info from prmon json
[2026-01-10 09:23:20] 2026-01-10 14:22:46,292 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:23:20] 2026-01-10 14:22:46,297 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:23:20] 2026-01-10 14:22:46,298 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:23:20] 2026-01-10 14:22:46,299 | INFO     | sum of square deviations: 51534492.799999975
[2026-01-10 09:23:20] 2026-01-10 14:22:46,299 | INFO     | sum of deviations: -21524961563.000004
[2026-01-10 09:23:20] 2026-01-10 14:22:46,299 | INFO     | mean x: 1768053101.8
[2026-01-10 09:23:20] 2026-01-10 14:22:46,299 | INFO     | mean y: 2844666.727272727
[2026-01-10 09:23:20] 2026-01-10 14:22:46,300 | INFO     | intersect: 738484451641.7736
[2026-01-10 09:23:20] 2026-01-10 14:22:46,300 | INFO     | chi2: 2.0588058739659627
[2026-01-10 09:23:20] 2026-01-10 14:22:46,300 | INFO     | current memory leak: -417.68 B/s (using 55 data points, chi2=2.06)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,300 | INFO     | could have reported an average CPU frequency of 2603 MHz (6 samples)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,300 | INFO     | ..............................
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . Timing measurements:
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . get job = 0 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . initial setup = 2 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . payload setup = 5 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . stage-in = 0 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . payload execution = 3777 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . stage-out = 1 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | . log creation = 0 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,301 | INFO     | ..............................
[2026-01-10 09:23:20] 2026-01-10 14:22:46,416 | INFO     | 
[2026-01-10 09:23:20] 2026-01-10 14:22:46,416 | INFO     | job summary report
[2026-01-10 09:23:20] 2026-01-10 14:22:46,416 | INFO     | --------------------------------------------------
[2026-01-10 09:23:20] 2026-01-10 14:22:46,416 | INFO     | PanDA job id: 6965384007
[2026-01-10 09:23:20] 2026-01-10 14:22:46,416 | INFO     | task id: 47962010
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | errors: (none)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | pilot state: finished 
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | transexitcode: 0
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | exeerrorcode: 0
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | exeerrordiag: 
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | exitcode: 0
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | exitmsg: OK
[2026-01-10 09:23:20] 2026-01-10 14:22:46,417 | INFO     | cpuconsumptiontime: 17336 s
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | nevents: 50
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | neventsw: 0
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | pid: 1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | pgrp: 1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | corecount: 12
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | event service: False
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | sizes: {0: 2284569, 4: 2284831, 11: 2284859, 3786: 2311469, 3787: 2311468, 3789: 2320518, 3792: 2320702, 3829: 2320948}
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | --------------------------------------------------
[2026-01-10 09:23:20] 2026-01-10 14:22:46,418 | INFO     | 
[2026-01-10 09:23:20] 2026-01-10 14:22:46,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:23:20] 2026-01-10 14:22:46,466 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,468 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:23:20] 2026-01-10 14:22:46,469 | INFO     | job 6965384007 has completed (purged errors)
[2026-01-10 09:23:20] 2026-01-10 14:22:46,469 | INFO     | overall cleanup function is called
[2026-01-10 09:23:20] 2026-01-10 14:22:47,504 | INFO     | --- collectZombieJob: --- 10, [1322727]
[2026-01-10 09:23:20] 2026-01-10 14:22:47,504 | INFO     | zombie collector waiting for pid 1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:47,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:23:20] 2026-01-10 14:22:47,505 | INFO     | collected zombie processes
[2026-01-10 09:23:20] 2026-01-10 14:22:47,505 | INFO     | will attempt to kill all subprocesses of pid=1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:47,946 | INFO     | process IDs to be killed: [1322727] (in reverse order)
[2026-01-10 09:23:20] 2026-01-10 14:22:48,435 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:23:20] 2026-01-10 14:22:48,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:23:20] 2026-01-10 14:22:48,453 | INFO     | did not find any defunct processes belonging to 1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:48,468 | INFO     | did not find any defunct processes belonging to 1322727
[2026-01-10 09:23:20] 2026-01-10 14:22:48,473 | INFO     | ready for new job
[2026-01-10 09:23:20] 2026-01-10 14:22:48,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:23:20] 2026-01-10 14:22:48,474 | INFO     | ***************************************
[2026-01-10 09:23:20] 2026-01-10 14:22:48,474 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:23:20] 2026-01-10 14:22:48,475 | INFO     | ***************************************
[2026-01-10 09:23:20] 2026-01-10 14:22:48,475 | INFO     | 
[2026-01-10 09:23:20] 2026-01-10 14:22:48,477 | INFO     | architecture information:
[2026-01-10 09:23:20] 2026-01-10 14:22:48,480 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:23:20] 2026-01-10 14:22:48,628 | INFO     | cat /etc/os-release:
[2026-01-10 09:23:20] NAME="CentOS Linux"
[2026-01-10 09:23:20] VERSION="7 (Core)"
[2026-01-10 09:23:20] ID="centos"
[2026-01-10 09:23:20] ID_LIKE="rhel fedora"
[2026-01-10 09:23:20] VERSION_ID="7"
[2026-01-10 09:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:23:20] ANSI_COLOR="0;31"
[2026-01-10 09:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:23:20] HOME_URL="https://www.centos.org/"
[2026-01-10 09:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:23:20] 
[2026-01-10 09:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:23:20] 
[2026-01-10 09:23:20] 2026-01-10 14:22:48,629 | INFO     | ***************************************
[2026-01-10 09:23:20] 2026-01-10 14:22:49,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:23:20] 2026-01-10 14:22:49,186 | INFO     | sufficient remaining disk space (52804190208 B)
[2026-01-10 09:23:20] 2026-01-10 14:22:49,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:23:20] 2026-01-10 14:22:49,186 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:23:20] 2026-01-10 14:22:49,187 | INFO     | update_server=False
[2026-01-10 09:23:20] 2026-01-10 14:22:49,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:23:20] 2026-01-10 14:22:49,203 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:23:20] 2026-01-10 14:22:49,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:23:20] 2026-01-10 14:22:49,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:23:20] 2026-01-10 14:22:49,609 | INFO     | aborting loop
[2026-01-10 09:23:20] 2026-01-10 14:22:49,752 | INFO     | all job control threads have been joined
[2026-01-10 09:23:20] 2026-01-10 14:22:49,918 | INFO     | all data control threads have been joined
[2026-01-10 09:23:20] 2026-01-10 14:22:50,193 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,264 | INFO     | [job] validate thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,350 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,355 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,439 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,544 | INFO     | all payload control threads have been joined
[2026-01-10 09:23:20] 2026-01-10 14:22:50,615 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,759 | INFO     | [job] control thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,925 | INFO     | [data] control thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:50,950 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:51,258 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:51,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:23:20] 2026-01-10 14:22:51,456 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:51,524 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:51,551 | INFO     | [payload] control thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:51,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:23:20] 2026-01-10 14:22:51,628 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:52,440 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:55,634 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:23:20] 2026-01-10 14:22:56,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173232420672)>', '<ExcThread(monitor, started 140172867909376)>']
[2026-01-10 09:23:20] 2026-01-10 14:23:01,443 | INFO     | all workflow threads have been joined
[2026-01-10 09:23:20] 2026-01-10 14:23:01,443 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:23:20] 2026-01-10 14:23:01,443 | INFO     | traces error code: 0
[2026-01-10 09:23:20] 2026-01-10 14:23:01,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:23:20] 2026-01-10 14:23:19,066 | INFO     | PID=1316202 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | INFO     | .. there are 7 such processes running
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:23:20] 2026-01-10 14:23:19,067 | INFO     | [monitor] control thread has ended
[2026-01-10 09:23:20] 2026-01-10 14:23:19,222 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:23:20] 2026-01-10 14:23:19,240 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:23:20] 2026-01-10 14:23:19,264 [wrapper] pilotpid: 1316202
[2026-01-10 09:23:20] 2026-01-10 14:23:19,284 [wrapper] Pilot exit status: 0
[2026-01-10 09:23:20] 2026-01-10 14:23:19,413 [wrapper] pandaids: 6965384007
[2026-01-10 09:23:20] 2026-01-10 14:23:19,638 [wrapper] cleanup supervisor_pilot 1412886 1316203
[2026-01-10 09:23:20] 2026-01-10 14:23:19,677 [wrapper] Test setup, not cleaning
[2026-01-10 09:23:20] 2026-01-10 14:23:19,683 [wrapper] apfmon messages muted
[2026-01-10 09:23:20] 2026-01-10 14:23:19,687 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:23:20] 2026-01-10 14:23:19,690 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:23:20]  *** Error codes and diagnostics ***
[2026-01-10 09:23:20]     "exeErrorCode": 0,
[2026-01-10 09:23:20]     "exeErrorDiag": "",
[2026-01-10 09:23:20]     "pilotErrorCode": 0,
[2026-01-10 09:23:20]     "pilotErrorDiag": "",
[2026-01-10 09:23:20]  *** Listing of results directory ***
[2026-01-10 09:23:20] total 434980
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:23:20] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:23:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:18 run_atlas
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:18 job.xml
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas 393042859 Jan 10 08:18 EVNT.47962006._000069.pool.root.1
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:18 start_atlas.sh
[2026-01-10 09:23:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:18 shared
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:18 input.tar.gz
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:18 boinc_lockfile
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:18 pandaJob.out
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas        57 Jan 10 08:18 setup.sh.local
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas    989556 Jan 10 08:18 agis_schedconf.cvmfs.json
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:18 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:23:20] drwx------. 5 boincer umatlas      4096 Jan 10 08:18 pilot3
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas       530 Jan 10 08:57 boinc_task_state.xml
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas      6655 Jan 10 09:19 init_data.xml
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas  44076738 Jan 10 09:21 HITS.47962010._002148.pool.root.1
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas      1039 Jan 10 09:22 memory_monitor_summary.json
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas   1618528 Jan 10 09:22 log.47962010._002148.job.log.tgz.1
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas        95 Jan 10 09:22 pilot_heartbeat.json
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas      8579 Jan 10 09:22 heartbeat.json
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:23 boinc_mmap_file
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:23 wrapper_checkpoint.txt
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas       822 Jan 10 09:23 pilotlog.txt
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas    575111 Jan 10 09:23 log.47962010._002148.job.log.1
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas       353 Jan 10 09:23 output.list
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:23 runtime_log
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas   2211840 Jan 10 09:23 result.tar.gz
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 09:23 runtime_log.err
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas       652 Jan 10 09:23 9PNKDmOyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSYhKDmwatTKo.diag
[2026-01-10 09:23:20] -rw-r--r--. 1 boincer umatlas     22525 Jan 10 09:23 stderr.txt
[2026-01-10 09:23:20] HITS file was successfully produced:
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas 44076738 Jan 10 09:21 shared/HITS.pool.root.1
[2026-01-10 09:23:20]  *** Contents of shared directory: ***
[2026-01-10 09:23:20] total 429636
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas 393042859 Jan 10 08:18 ATLAS.root_0
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:18 start_atlas.sh
[2026-01-10 09:23:20] -rw-r--r--. 2 boincer umatlas    592621 Jan 10 08:18 input.tar.gz
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas  44076738 Jan 10 09:21 HITS.pool.root.1
[2026-01-10 09:23:20] -rw-------. 1 boincer umatlas   2211840 Jan 10 09:23 result.tar.gz
09:23:22 (1312522): run_atlas exited; CPU time 17346.839761
09:23:22 (1312522): called boinc_finish(0)

</stderr_txt>
]]>

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