Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:08:42 (1916950): wrapper (7.7.26015): starting
12:08:42 (1916950): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 12:08:42] Arguments: --nthreads 10
[2026-01-10 12:08:42] Threads: 10
[2026-01-10 12:08:42] Checking for CVMFS
[2026-01-10 12:08:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:08:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:08:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:08:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:08:43] 2.13.3.0 12548 95128 388388 154986 2 107 37855922 40960001 9675 16776704 34 390850810 99.609 404707242 36445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 12:08:43] CVMFS is ok
[2026-01-10 12:08:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 12:08:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 12:08:43] Further information can be found at the LHC@home message board.
[2026-01-10 12:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:08:43] Checking for apptainer binary...
[2026-01-10 12:08:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:08:43] Running /usr/bin/apptainer --version
[2026-01-10 12:08:43] apptainer version 1.4.5-2.el9
[2026-01-10 12:08:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:08:43] c7-11-12.aglt2.org
[2026-01-10 12:08:43] apptainer works
[2026-01-10 12:08:43] Set ATHENA_PROC_NUMBER=10
[2026-01-10 12:08:43] Set ATHENA_CORE_NUMBER=10
[2026-01-10 12:08:43] Starting ATLAS job with PandaID=6965383998
[2026-01-10 12:08:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:54:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:54:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 12:54:06]  replicas=None
[2026-01-10 12:54:06]  scope=mc16_13TeV
[2026-01-10 12:54:06]  status=None
[2026-01-10 12:54:06]  status_code=0
[2026-01-10 12:54:06]  storage_token=
[2026-01-10 12:54:06]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965383998/log.47962010._002139.job.log.tgz.1
[2026-01-10 12:54:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a7/a4/log.47962010._002139.job.log.tgz.1
[2026-01-10 12:54:06]  workdir=None
[2026-01-10 12:54:06] ]
[2026-01-10 12:54:06] 2026-01-10 17:53:20,891 | INFO     | transferring file log.47962010._002139.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965383998/log.47962010._002139.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 12:54:06] 2026-01-10 17:53:20,891 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965383998/log.47962010._002139.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002139.job
[2026-01-10 12:54:06] 2026-01-10 17:53:20,917 | INFO     | adding to output.list: log.47962010._002139.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/a7/a4/log.47962010._002139.job.log.tgz.
[2026-01-10 12:54:06] 2026-01-10 17:53:20,918 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 12:54:06] 2026-01-10 17:53:20,918 | INFO     | summary of transferred files:
[2026-01-10 12:54:06] 2026-01-10 17:53:20,918 | INFO     |  -- lfn=log.47962010._002139.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 12:54:06] 2026-01-10 17:53:20,918 | INFO     | stage-out finished correctly
[2026-01-10 12:54:06] 2026-01-10 17:53:21,047 | INFO     | time since job start (2665s) is within the limit (349056.0s)
[2026-01-10 12:54:06] 2026-01-10 17:53:21,788 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 12:54:06] 2026-01-10 17:53:23,052 | INFO     | time since job start (2667s) is within the limit (349056.0s)
[2026-01-10 12:54:06] 2026-01-10 17:53:24,669 | INFO     | job 6965383998 has state=finished
[2026-01-10 12:54:06] 2026-01-10 17:53:24,669 | INFO     | preparing for final server update for job 6965383998 in state='finished'
[2026-01-10 12:54:06] 2026-01-10 17:53:24,670 | INFO     | this job has now completed (state=finished)
[2026-01-10 12:54:06] 2026-01-10 17:53:24,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 12:54:06] 2026-01-10 17:53:24,670 | INFO     | log transfer has been attempted: DONE
[2026-01-10 12:54:06] 2026-01-10 17:53:24,670 | INFO     | job 6965383998 has finished - writing final server update
[2026-01-10 12:54:06] 2026-01-10 17:53:24,670 | INFO     | total number of processed events: 50 (read)
[2026-01-10 12:54:06] 2026-01-10 17:53:24,683 | INFO     | executing command: lscpu
[2026-01-10 12:54:06] 2026-01-10 17:53:24,767 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 12:54:06] 2026-01-10 17:53:25,053 | INFO     | time since job start (2669s) is within the limit (349056.0s)
[2026-01-10 12:54:06] 2026-01-10 17:53:26,229 | WARNING  | process 1928842 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 12:54:06] 2026-01-10 17:53:26,229 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383998/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:54:06] 2026-01-10 17:53:26,486 | INFO     | number of running child processes to parent process 1928842: 1
[2026-01-10 12:54:06] 2026-01-10 17:53:26,486 | INFO     | maximum number of monitored processes: 18
[2026-01-10 12:54:06] 2026-01-10 17:53:27,063 | INFO     | time since job start (2671s) is within the limit (349056.0s)
[2026-01-10 12:54:06] 2026-01-10 17:53:28,991 | INFO     | monitor loop #190: job 0:6965383998 is in state 'finished'
[2026-01-10 12:54:06] 2026-01-10 17:53:28,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,070 | INFO     | time since job start (2673s) is within the limit (349056.0s)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,582 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 12:54:06] 2026-01-10 17:53:29,586 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.185921875
[2026-01-10 12:54:06] 2026-01-10 17:53:29,662 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383998/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,662 | INFO     | extracted standard info from prmon json
[2026-01-10 12:54:06] 2026-01-10 17:53:29,663 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:54:06] 2026-01-10 17:53:29,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:54:06] 2026-01-10 17:53:29,664 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:54:06] 2026-01-10 17:53:29,664 | INFO     | sum of square deviations: 15691326.918918926
[2026-01-10 12:54:06] 2026-01-10 17:53:29,664 | INFO     | sum of deviations: -2587475841.027027
[2026-01-10 12:54:06] 2026-01-10 17:53:29,664 | INFO     | mean x: 1768066367.4054055
[2026-01-10 12:54:06] 2026-01-10 17:53:29,664 | INFO     | mean y: 2680733.135135135
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | intersect: 291554124064.4229
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | chi2: 0.5428025673120043
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | current memory leak: -164.90 B/s (using 37 data points, chi2=0.54)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | could have reported an average CPU frequency of 3290 MHz (5 samples)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | ..............................
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | . Timing measurements:
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | . get job = 0 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | . initial setup = 2 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,665 | INFO     | . payload setup = 6 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,683 | INFO     | . stage-in = 0 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,683 | INFO     | . payload execution = 2637 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,683 | INFO     | . stage-out = 0 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,683 | INFO     | . log creation = 0 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,683 | INFO     | ..............................
[2026-01-10 12:54:06] 2026-01-10 17:53:29,874 | INFO     | 
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | job summary report
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | --------------------------------------------------
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | PanDA job id: 6965383998
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | task id: 47962010
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | errors: (none)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | pilot state: finished 
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | transexitcode: 0
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | exeerrorcode: 0
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | exeerrordiag: 
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | exitcode: 0
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | exitmsg: OK
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | cpuconsumptiontime: 12708 s
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | nevents: 50
[2026-01-10 12:54:06] 2026-01-10 17:53:29,875 | INFO     | neventsw: 0
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | pid: 1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | pgrp: 1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | corecount: 10
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | event service: False
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 2648: 2310910, 2649: 2319904, 2650: 2319960, 2658: 2320366}
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | --------------------------------------------------
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | 
[2026-01-10 12:54:06] 2026-01-10 17:53:29,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 12:54:06] 2026-01-10 17:53:29,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,903 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:54:06] 2026-01-10 17:53:29,903 | INFO     | job 6965383998 has completed (purged errors)
[2026-01-10 12:54:06] 2026-01-10 17:53:29,903 | INFO     | overall cleanup function is called
[2026-01-10 12:54:06] 2026-01-10 17:53:30,919 | INFO     | --- collectZombieJob: --- 10, [1928842]
[2026-01-10 12:54:06] 2026-01-10 17:53:30,919 | INFO     | zombie collector waiting for pid 1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:30,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:54:06] 2026-01-10 17:53:30,919 | INFO     | collected zombie processes
[2026-01-10 12:54:06] 2026-01-10 17:53:30,919 | INFO     | will attempt to kill all subprocesses of pid=1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:31,201 | INFO     | process IDs to be killed: [1928842] (in reverse order)
[2026-01-10 12:54:06] 2026-01-10 17:53:31,290 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:54:06] 2026-01-10 17:53:31,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:54:06] 2026-01-10 17:53:31,301 | INFO     | did not find any defunct processes belonging to 1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:31,314 | INFO     | did not find any defunct processes belonging to 1928842
[2026-01-10 12:54:06] 2026-01-10 17:53:31,314 | INFO     | ready for new job
[2026-01-10 12:54:06] 2026-01-10 17:53:31,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:54:06] 2026-01-10 17:53:31,316 | INFO     | ***************************************
[2026-01-10 12:54:06] 2026-01-10 17:53:31,317 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:54:06] 2026-01-10 17:53:31,317 | INFO     | ***************************************
[2026-01-10 12:54:06] 2026-01-10 17:53:31,317 | INFO     | 
[2026-01-10 12:54:06] 2026-01-10 17:53:31,320 | INFO     | architecture information:
[2026-01-10 12:54:06] 2026-01-10 17:53:31,321 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:54:06] 2026-01-10 17:53:31,341 | INFO     | cat /etc/os-release:
[2026-01-10 12:54:06] NAME="CentOS Linux"
[2026-01-10 12:54:06] VERSION="7 (Core)"
[2026-01-10 12:54:06] ID="centos"
[2026-01-10 12:54:06] ID_LIKE="rhel fedora"
[2026-01-10 12:54:06] VERSION_ID="7"
[2026-01-10 12:54:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:54:06] ANSI_COLOR="0;31"
[2026-01-10 12:54:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:54:06] HOME_URL="https://www.centos.org/"
[2026-01-10 12:54:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:54:06] 
[2026-01-10 12:54:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:54:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:54:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:54:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:54:06] 
[2026-01-10 12:54:06] 2026-01-10 17:53:31,342 | INFO     | ***************************************
[2026-01-10 12:54:06] 2026-01-10 17:53:31,845 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 12:54:06] 2026-01-10 17:53:31,865 | INFO     | sufficient remaining disk space (84787855360 B)
[2026-01-10 12:54:06] 2026-01-10 17:53:31,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:54:06] 2026-01-10 17:53:31,866 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:54:06] 2026-01-10 17:53:31,866 | INFO     | update_server=False
[2026-01-10 12:54:06] 2026-01-10 17:53:31,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:54:06] 2026-01-10 17:53:31,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:54:06] 2026-01-10 17:53:31,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:54:06] 2026-01-10 17:53:32,111 | INFO     | all payload control threads have been joined
[2026-01-10 12:54:06] 2026-01-10 17:53:32,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:54:06] 2026-01-10 17:53:32,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:54:06] 2026-01-10 17:53:32,505 | INFO     | aborting loop
[2026-01-10 12:54:06] 2026-01-10 17:53:32,568 | INFO     | all data control threads have been joined
[2026-01-10 12:54:06] 2026-01-10 17:53:32,871 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:32,871 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,116 | INFO     | [payload] control thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,130 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,283 | INFO     | all job control threads have been joined
[2026-01-10 12:54:06] 2026-01-10 17:53:33,511 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,574 | INFO     | [data] control thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,634 | INFO     | [job] validate thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,694 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:33,892 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:34,069 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:34,163 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:34,195 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:34,289 | INFO     | [job] control thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:34,360 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:36,402 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:42,335 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:54:06] 2026-01-10 17:53:43,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:54:06] 2026-01-10 17:53:53,573 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-01-10 12:54:06] 2026-01-10 17:54:00,843 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:54:06] 2026-01-10 17:54:01,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741119891264)>', '<ExcThread(monitor, started 139740770719488)>']
[2026-01-10 12:54:06] 2026-01-10 17:54:03,045 | INFO     | PID=1921318 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 12:54:06] 2026-01-10 17:54:03,046 | INFO     | .. there are 10 such processes running
[2026-01-10 12:54:06] 2026-01-10 17:54:03,048 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:54:06] 2026-01-10 17:54:03,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:54:06] 2026-01-10 17:54:03,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:54:06] 2026-01-10 17:54:03,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:54:06] 2026-01-10 17:54:03,048 | INFO     | [monitor] control thread has ended
[2026-01-10 12:54:06] 2026-01-10 17:54:06,347 | INFO     | all workflow threads have been joined
[2026-01-10 12:54:06] 2026-01-10 17:54:06,347 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:54:06] 2026-01-10 17:54:06,347 | INFO     | traces error code: 0
[2026-01-10 12:54:06] 2026-01-10 17:54:06,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:54:06] 2026-01-10 17:54:06,481 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:54:06] 2026-01-10 17:54:06,484 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:54:06] 2026-01-10 17:54:06,487 [wrapper] pilotpid: 1921318
[2026-01-10 12:54:06] 2026-01-10 17:54:06,490 [wrapper] Pilot exit status: 0
[2026-01-10 12:54:06] 2026-01-10 17:54:06,501 [wrapper] pandaids: 6965383998
[2026-01-10 12:54:06] 2026-01-10 17:54:06,576 [wrapper] cleanup supervisor_pilot 2062525 1921319
[2026-01-10 12:54:06] 2026-01-10 17:54:06,580 [wrapper] Test setup, not cleaning
[2026-01-10 12:54:06] 2026-01-10 17:54:06,583 [wrapper] apfmon messages muted
[2026-01-10 12:54:06] 2026-01-10 17:54:06,586 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:54:06] 2026-01-10 17:54:06,588 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:54:06]  *** Error codes and diagnostics ***
[2026-01-10 12:54:06]     "exeErrorCode": 0,
[2026-01-10 12:54:06]     "exeErrorDiag": "",
[2026-01-10 12:54:06]     "pilotErrorCode": 0,
[2026-01-10 12:54:06]     "pilotErrorDiag": "",
[2026-01-10 12:54:06]  *** Listing of results directory ***
[2026-01-10 12:54:06] total 433764
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 12:54:06] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas       100 Jan 10 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:54:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 12:08 run_atlas
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas       105 Jan 10 12:08 job.xml
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas 391566827 Jan 10 12:08 EVNT.47962006._000064.pool.root.1
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 12:08 start_atlas.sh
[2026-01-10 12:54:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 12:08 shared
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 12:08 input.tar.gz
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas         0 Jan 10 12:08 boinc_lockfile
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 12:08 pandaJob.out
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas        57 Jan 10 12:08 setup.sh.local
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas    989556 Jan 10 12:08 agis_schedconf.cvmfs.json
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas   1516240 Jan 10 12:08 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:54:06] drwx------. 5 boincer umatlas      4096 Jan 10 12:08 pilot3
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas       529 Jan 10 12:45 boinc_task_state.xml
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas      6900 Jan 10 12:46 init_data.xml
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas  45100975 Jan 10 12:53 HITS.47962010._002139.pool.root.1
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas      1031 Jan 10 12:53 memory_monitor_summary.json
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas   1372479 Jan 10 12:53 log.47962010._002139.job.log.tgz.1
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas      8535 Jan 10 12:53 heartbeat.json
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 12:54 boinc_mmap_file
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas        95 Jan 10 12:54 pilot_heartbeat.json
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas        27 Jan 10 12:54 wrapper_checkpoint.txt
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas      4896 Jan 10 12:54 pilotlog.txt
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas    419878 Jan 10 12:54 log.47962010._002139.job.log.1
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas       353 Jan 10 12:54 output.list
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas       620 Jan 10 12:54 runtime_log
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas   1812480 Jan 10 12:54 result.tar.gz
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas       652 Jan 10 12:54 SyKODmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOYhKDmKFxyhn.diag
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 12:54 runtime_log.err
[2026-01-10 12:54:06] -rw-r--r--. 1 boincer umatlas     21952 Jan 10 12:54 stderr.txt
[2026-01-10 12:54:06] HITS file was successfully produced:
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas 45100975 Jan 10 12:53 shared/HITS.pool.root.1
[2026-01-10 12:54:06]  *** Contents of shared directory: ***
[2026-01-10 12:54:06] total 428808
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas 391566827 Jan 10 12:08 ATLAS.root_0
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 12:08 start_atlas.sh
[2026-01-10 12:54:06] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 12:08 input.tar.gz
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas  45100975 Jan 10 12:53 HITS.pool.root.1
[2026-01-10 12:54:06] -rw-------. 1 boincer umatlas   1812480 Jan 10 12:54 result.tar.gz
12:54:08 (1916950): run_atlas exited; CPU time 12655.265127
12:54:08 (1916950): called boinc_finish(0)

</stderr_txt>
]]>

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