Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:14 (2748787): wrapper (7.7.26015): starting
08:17:14 (2748787): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:17:14] Arguments: --nthreads 8
[2026-01-10 08:17:14] Threads: 8
[2026-01-10 08:17:14] Checking for CVMFS
[2026-01-10 08:17:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:17:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:17:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:17:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:17:15] 2.13.3.0 6723 24397 181020 154981 0 57 38671518 40960001 9957 16776704 0 17554890 99.587 18340630 38981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:17:15] CVMFS is ok
[2026-01-10 08:17:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:17:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:17:15] Further information can be found at the LHC@home message board.
[2026-01-10 08:17:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:17:15] Checking for apptainer binary...
[2026-01-10 08:17:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:17:15] Running /usr/bin/apptainer --version
[2026-01-10 08:17:15] apptainer version 1.4.5-2.el9
[2026-01-10 08:17:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:17:15] c-210-35-2.aglt2.org
[2026-01-10 08:17:15] apptainer works
[2026-01-10 08:17:15] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:17:15] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:17:15] Starting ATLAS job with PandaID=6965384134
[2026-01-10 08:17:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:13:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:13:46]  workdir=None
[2026-01-10 09:13:46] ]
[2026-01-10 09:13:46] 2026-01-10 14:12:57,062 | INFO     | transferring file log.47962010._002275.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6965384134/log.47962010._002275.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:13:46] 2026-01-10 14:12:57,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6965384134/log.47962010._002275.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._002275.job
[2026-01-10 09:13:46] 2026-01-10 14:12:57,116 | INFO     | time since job start (3330s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:12:57,126 | INFO     | adding to output.list: log.47962010._002275.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f4/62/log.47962010._002275.job.log.tgz.
[2026-01-10 09:13:46] 2026-01-10 14:12:57,127 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:13:46] 2026-01-10 14:12:57,127 | INFO     | summary of transferred files:
[2026-01-10 09:13:46] 2026-01-10 14:12:57,127 | INFO     |  -- lfn=log.47962010._002275.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:13:46] 2026-01-10 14:12:57,127 | INFO     | stage-out finished correctly
[2026-01-10 09:13:46] 2026-01-10 14:12:57,601 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:13:46] 2026-01-10 14:12:57,939 | INFO     | monitor loop #233: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:12:57,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:12:59,123 | INFO     | time since job start (3332s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,444 | INFO     | monitor loop #234: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:00,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,758 | INFO     | job 6965384134 has state=finished
[2026-01-10 09:13:46] 2026-01-10 14:13:00,759 | INFO     | preparing for final server update for job 6965384134 in state='finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:00,881 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,883 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,883 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,883 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:13:46] 2026-01-10 14:13:00,883 | INFO     | job 6965384134 has finished - writing final server update
[2026-01-10 09:13:46] 2026-01-10 14:13:00,883 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:13:46] 2026-01-10 14:13:00,902 | INFO     | executing command: lscpu
[2026-01-10 09:13:46] 2026-01-10 14:13:00,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:13:46] 2026-01-10 14:13:01,130 | INFO     | time since job start (3334s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:02,949 | INFO     | monitor loop #235: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:02,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:13:03,146 | INFO     | time since job start (3336s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:05,152 | INFO     | time since job start (3338s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:05,453 | INFO     | monitor loop #236: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:05,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:13:07,161 | INFO     | time since job start (3340s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:07,958 | INFO     | monitor loop #237: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:07,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:13:09,191 | INFO     | time since job start (3342s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:10,463 | INFO     | monitor loop #238: job 0:6965384134 is in state 'finished'
[2026-01-10 09:13:46] 2026-01-10 14:13:10,463 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:13:46] 2026-01-10 14:13:10,746 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:13:46] 2026-01-10 14:13:10,774 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3114.4230714285704
[2026-01-10 09:13:46] 2026-01-10 14:13:10,813 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384134/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:13:46] 2026-01-10 14:13:10,814 | INFO     | extracted standard info from prmon json
[2026-01-10 09:13:46] 2026-01-10 14:13:10,814 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:13:46] 2026-01-10 14:13:10,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:13:46] 2026-01-10 14:13:10,816 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:13:46] 2026-01-10 14:13:10,816 | INFO     | sum of square deviations: 34308631.25
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | sum of deviations: -1964582081.9999995
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | mean x: 1768052816.625
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | mean y: 2591062.8333333335
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | intersect: 101244895317.4254
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | chi2: 0.8567480541057051
[2026-01-10 09:13:46] 2026-01-10 14:13:10,817 | INFO     | current memory leak: -57.26 B/s (using 48 data points, chi2=0.86)
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | could have reported an average CPU frequency of 3111 MHz (5 samples)
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | ..............................
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | . Timing measurements:
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | . get job = 0 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | . initial setup = 2 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | . payload setup = 6 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,818 | INFO     | . stage-in = 0 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,819 | INFO     | . payload execution = 3302 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,819 | INFO     | . stage-out = 1 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,819 | INFO     | . log creation = 0 s
[2026-01-10 09:13:46] 2026-01-10 14:13:10,819 | INFO     | ..............................
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | 
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | job summary report
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | --------------------------------------------------
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | PanDA job id: 6965384134
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | task id: 47962010
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | errors: (none)
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | pilot state: finished 
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | transexitcode: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:11,161 | INFO     | exeerrorcode: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | exeerrordiag: 
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | exitcode: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | exitmsg: OK
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | cpuconsumptiontime: 14398 s
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | nevents: 50
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | neventsw: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | pid: 2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | pgrp: 2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | corecount: 8
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | event service: False
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | sizes: {0: 2284569, 1: 2284569, 5: 2284859, 11: 2284915, 3312: 2311216, 3315: 2320394, 3328: 2320616}
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | --------------------------------------------------
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | 
[2026-01-10 09:13:46] 2026-01-10 14:13:11,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:13:46] 2026-01-10 14:13:11,204 | INFO     | time since job start (3344s) is within the limit (349056.0s)
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,340 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:13:46] 2026-01-10 14:13:11,341 | INFO     | job 6965384134 has completed (purged errors)
[2026-01-10 09:13:46] 2026-01-10 14:13:11,341 | INFO     | overall cleanup function is called
[2026-01-10 09:13:46] 2026-01-10 14:13:12,379 | INFO     | --- collectZombieJob: --- 10, [2766729]
[2026-01-10 09:13:46] 2026-01-10 14:13:12,379 | INFO     | zombie collector waiting for pid 2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:12,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:13:46] 2026-01-10 14:13:12,379 | INFO     | collected zombie processes
[2026-01-10 09:13:46] 2026-01-10 14:13:12,379 | INFO     | will attempt to kill all subprocesses of pid=2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:12,808 | INFO     | process IDs to be killed: [2766729] (in reverse order)
[2026-01-10 09:13:46] 2026-01-10 14:13:12,886 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:13:46] 2026-01-10 14:13:12,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:13:46] 2026-01-10 14:13:12,895 | INFO     | did not find any defunct processes belonging to 2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:12,903 | INFO     | did not find any defunct processes belonging to 2766729
[2026-01-10 09:13:46] 2026-01-10 14:13:12,903 | INFO     | ready for new job
[2026-01-10 09:13:46] 2026-01-10 14:13:12,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:13:46] 2026-01-10 14:13:12,905 | INFO     | ***************************************
[2026-01-10 09:13:46] 2026-01-10 14:13:12,905 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:13:46] 2026-01-10 14:13:12,905 | INFO     | ***************************************
[2026-01-10 09:13:46] 2026-01-10 14:13:12,905 | INFO     | 
[2026-01-10 09:13:46] 2026-01-10 14:13:12,908 | INFO     | architecture information:
[2026-01-10 09:13:46] 2026-01-10 14:13:12,909 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:13:46] 2026-01-10 14:13:12,929 | INFO     | cat /etc/os-release:
[2026-01-10 09:13:46] NAME="CentOS Linux"
[2026-01-10 09:13:46] VERSION="7 (Core)"
[2026-01-10 09:13:46] ID="centos"
[2026-01-10 09:13:46] ID_LIKE="rhel fedora"
[2026-01-10 09:13:46] VERSION_ID="7"
[2026-01-10 09:13:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:13:46] ANSI_COLOR="0;31"
[2026-01-10 09:13:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:13:46] HOME_URL="https://www.centos.org/"
[2026-01-10 09:13:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:13:46] 
[2026-01-10 09:13:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:13:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:13:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:13:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:13:46] 
[2026-01-10 09:13:46] 2026-01-10 14:13:12,929 | INFO     | ***************************************
[2026-01-10 09:13:46] 2026-01-10 14:13:13,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:13:46] 2026-01-10 14:13:13,493 | INFO     | sufficient remaining disk space (72579284992 B)
[2026-01-10 09:13:46] 2026-01-10 14:13:13,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:13:46] 2026-01-10 14:13:13,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:13:46] 2026-01-10 14:13:13,494 | INFO     | update_server=False
[2026-01-10 09:13:46] 2026-01-10 14:13:13,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:13:46] 2026-01-10 14:13:13,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:13:46] 2026-01-10 14:13:13,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:13:46] 2026-01-10 14:13:13,865 | INFO     | all data control threads have been joined
[2026-01-10 09:13:46] 2026-01-10 14:13:13,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:13:46] 2026-01-10 14:13:13,984 | INFO     | aborting loop
[2026-01-10 09:13:46] 2026-01-10 14:13:14,026 | INFO     | all payload control threads have been joined
[2026-01-10 09:13:46] 2026-01-10 14:13:14,500 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,567 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,603 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,673 | INFO     | all job control threads have been joined
[2026-01-10 09:13:46] 2026-01-10 14:13:14,719 | INFO     | [job] validate thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,868 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,873 | INFO     | [data] control thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,923 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:14,993 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,024 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,033 | INFO     | [payload] control thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,438 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,501 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,546 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:15,679 | INFO     | [job] control thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:16,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:13:46] 2026-01-10 14:13:17,029 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:17,505 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:13:46] 2026-01-10 14:13:32,472 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:13:46] 2026-01-10 14:13:33,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695242499904)>', '<ExcThread(monitor, started 139694868256512)>']
[2026-01-10 09:13:46] 2026-01-10 14:13:38,981 | INFO     | all workflow threads have been joined
[2026-01-10 09:13:46] 2026-01-10 14:13:38,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:13:46] 2026-01-10 14:13:38,981 | INFO     | traces error code: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:38,982 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:13:46] 2026-01-10 14:13:44,962 | INFO     | PID=2753631 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:13:46] 2026-01-10 14:13:44,963 | INFO     | .. there are 10 such processes running
[2026-01-10 09:13:46] 2026-01-10 14:13:44,963 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:13:46] 2026-01-10 14:13:44,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:13:46] 2026-01-10 14:13:44,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:13:46] 2026-01-10 14:13:44,964 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:13:46] 2026-01-10 14:13:44,964 | INFO     | [monitor] control thread has ended
[2026-01-10 09:13:46] 2026-01-10 14:13:45,216 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:13:46] 2026-01-10 14:13:45,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:13:46] 2026-01-10 14:13:45,224 [wrapper] pilotpid: 2753631
[2026-01-10 09:13:46] 2026-01-10 14:13:45,228 [wrapper] Pilot exit status: 0
[2026-01-10 09:13:46] 2026-01-10 14:13:45,335 [wrapper] pandaids: 6965384134
[2026-01-10 09:13:46] 2026-01-10 14:13:45,476 [wrapper] cleanup supervisor_pilot 2853448 2753632
[2026-01-10 09:13:46] 2026-01-10 14:13:45,598 [wrapper] Test setup, not cleaning
[2026-01-10 09:13:46] 2026-01-10 14:13:45,603 [wrapper] apfmon messages muted
[2026-01-10 09:13:46] 2026-01-10 14:13:45,620 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:13:46] 2026-01-10 14:13:45,626 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:13:46]  *** Error codes and diagnostics ***
[2026-01-10 09:13:46]     "exeErrorCode": 0,
[2026-01-10 09:13:46]     "exeErrorDiag": "",
[2026-01-10 09:13:46]     "pilotErrorCode": 0,
[2026-01-10 09:13:46]     "pilotErrorDiag": "",
[2026-01-10 09:13:46]  *** Listing of results directory ***
[2026-01-10 09:13:46] total 432256
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:13:46] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:13:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:17 run_atlas
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:17 job.xml
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:17 EVNT.47962006._000079.pool.root.1
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:17 start_atlas.sh
[2026-01-10 09:13:46] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:17 shared
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 08:17 input.tar.gz
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:17 boinc_lockfile
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:17 pandaJob.out
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas        57 Jan 10 08:17 setup.sh.local
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas    989556 Jan 10 08:17 agis_schedconf.cvmfs.json
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:17 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:13:46] drwx------. 5 boincer umatlas      4096 Jan 10 08:17 pilot3
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:04 boinc_task_state.xml
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas      6840 Jan 10 09:12 init_data.xml
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas  44992846 Jan 10 09:12 HITS.47962010._002275.pool.root.1
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas      1047 Jan 10 09:12 memory_monitor_summary.json
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas   1186095 Jan 10 09:12 log.47962010._002275.job.log.tgz.1
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas      8573 Jan 10 09:13 heartbeat.json
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:13 wrapper_checkpoint.txt
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas        95 Jan 10 09:13 pilot_heartbeat.json
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas       823 Jan 10 09:13 pilotlog.txt
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas    502204 Jan 10 09:13 log.47962010._002275.job.log.1
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas       353 Jan 10 09:13 output.list
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:13 runtime_log
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas   1710080 Jan 10 09:13 result.tar.gz
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas       654 Jan 10 09:13 yrGNDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAomKDmFYeqgm.diag
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas      9352 Jan 10 09:13 runtime_log.err
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:13 boinc_mmap_file
[2026-01-10 09:13:46] -rw-r--r--. 1 boincer umatlas     22403 Jan 10 09:13 stderr.txt
[2026-01-10 09:13:46] HITS file was successfully produced:
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas 44992846 Jan 10 09:12 shared/HITS.pool.root.1
[2026-01-10 09:13:46]  *** Contents of shared directory: ***
[2026-01-10 09:13:46] total 427408
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:17 ATLAS.root_0
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:17 start_atlas.sh
[2026-01-10 09:13:46] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 08:17 input.tar.gz
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas  44992846 Jan 10 09:12 HITS.pool.root.1
[2026-01-10 09:13:46] -rw-------. 1 boincer umatlas   1710080 Jan 10 09:13 result.tar.gz
09:13:47 (2748787): run_atlas exited; CPU time 14394.962113
09:13:47 (2748787): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN