Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:08 (1738089): wrapper (7.7.26015): starting
08:21:08 (1738089): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:21:09] Arguments: --nthreads 9
[2026-01-10 08:21:09] Threads: 9
[2026-01-10 08:21:09] Checking for CVMFS
[2026-01-10 08:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:09] 2.13.3.0 11416 94856 226904 154981 0 134 22461911 32935937 14949 16776704 0 618294222 99.539 747779456 37322 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:21:09] CVMFS is ok
[2026-01-10 08:21:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:09] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:09] Checking for apptainer binary...
[2026-01-10 08:21:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:09] Running /usr/bin/apptainer --version
[2026-01-10 08:21:09] apptainer version 1.4.5-2.el9
[2026-01-10 08:21:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:09] c7-2-16.aglt2.org
[2026-01-10 08:21:09] apptainer works
[2026-01-10 08:21:09] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:21:09] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:21:09] Starting ATLAS job with PandaID=6965384110
[2026-01-10 08:21:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:50:38]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:50:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/10/9b/log.47962010._002251.job.log.tgz.1
[2026-01-10 09:50:38]  workdir=None
[2026-01-10 09:50:38] ]
[2026-01-10 09:50:38] 2026-01-10 14:49:47,614 | INFO     | transferring file log.47962010._002251.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965384110/log.47962010._002251.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:50:38] 2026-01-10 14:49:47,614 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965384110/log.47962010._002251.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002251.job
[2026-01-10 09:50:38] 2026-01-10 14:49:47,656 | INFO     | adding to output.list: log.47962010._002251.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/10/9b/log.47962010._002251.job.log.tgz.
[2026-01-10 09:50:38] 2026-01-10 14:49:47,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:50:38] 2026-01-10 14:49:47,657 | INFO     | summary of transferred files:
[2026-01-10 09:50:38] 2026-01-10 14:49:47,657 | INFO     |  -- lfn=log.47962010._002251.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:50:38] 2026-01-10 14:49:47,657 | INFO     | stage-out finished correctly
[2026-01-10 09:50:38] 2026-01-10 14:49:48,366 | INFO     | monitor loop #343: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:48,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:49:48,858 | INFO     | time since job start (5306s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:49:50,865 | INFO     | time since job start (5308s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:49:50,871 | INFO     | monitor loop #344: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:50,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:49:51,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:50:38] 2026-01-10 14:49:52,639 | INFO     | job 6965384110 has state=finished
[2026-01-10 09:50:38] 2026-01-10 14:49:52,641 | INFO     | preparing for final server update for job 6965384110 in state='finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:52,641 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:50:38] 2026-01-10 14:49:52,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:50:38] 2026-01-10 14:49:52,642 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:50:38] 2026-01-10 14:49:52,642 | INFO     | job 6965384110 has finished - writing final server update
[2026-01-10 09:50:38] 2026-01-10 14:49:52,642 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:50:38] 2026-01-10 14:49:52,667 | INFO     | executing command: lscpu
[2026-01-10 09:50:38] 2026-01-10 14:49:52,872 | INFO     | time since job start (5310s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:49:52,947 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:50:38] 2026-01-10 14:49:53,376 | INFO     | monitor loop #345: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:53,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:49:54,879 | INFO     | time since job start (5312s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:49:55,881 | INFO     | monitor loop #346: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:55,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:49:56,886 | INFO     | time since job start (5314s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:49:58,388 | INFO     | monitor loop #347: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:49:58,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:49:58,894 | INFO     | time since job start (5316s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:50:00,893 | INFO     | monitor loop #348: job 0:6965384110 is in state 'finished'
[2026-01-10 09:50:38] 2026-01-10 14:50:00,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:38] 2026-01-10 14:50:00,901 | INFO     | time since job start (5318s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:50:02,908 | INFO     | time since job start (5320s) is within the limit (349056.0s)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,261 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:50:38] 2026-01-10 14:50:03,269 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3255.430885416667
[2026-01-10 09:50:38] 2026-01-10 14:50:03,289 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965384110/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,290 | INFO     | extracted standard info from prmon json
[2026-01-10 09:50:38] 2026-01-10 14:50:03,291 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:50:38] 2026-01-10 14:50:03,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:50:38] 2026-01-10 14:50:03,313 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | sum of square deviations: 158650015.55000016
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | sum of deviations: -4642587382.15
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | mean x: 1768054026.325
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | mean y: 2597558.775
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | intersect: 51741296008.43891
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | chi2: 1.6881501379501738
[2026-01-10 09:50:38] 2026-01-10 14:50:03,314 | INFO     | current memory leak: -29.26 B/s (using 80 data points, chi2=1.69)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | could have reported an average CPU frequency of 3211 MHz (6 samples)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | ..............................
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . Timing measurements:
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . get job = 0 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . initial setup = 2 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . payload setup = 6 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . stage-in = 0 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . payload execution = 5276 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . stage-out = 2 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | . log creation = 0 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,315 | INFO     | ..............................
[2026-01-10 09:50:38] 2026-01-10 14:50:03,741 | INFO     | 
[2026-01-10 09:50:38] 2026-01-10 14:50:03,741 | INFO     | job summary report
[2026-01-10 09:50:38] 2026-01-10 14:50:03,741 | INFO     | --------------------------------------------------
[2026-01-10 09:50:38] 2026-01-10 14:50:03,741 | INFO     | PanDA job id: 6965384110
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | task id: 47962010
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | errors: (none)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | pilot state: finished 
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | transexitcode: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | exeerrorcode: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | exeerrordiag: 
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | exitcode: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | exitmsg: OK
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | cpuconsumptiontime: 12525 s
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | nevents: 50
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | neventsw: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | pid: 1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | pgrp: 1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | corecount: 9
[2026-01-10 09:50:38] 2026-01-10 14:50:03,742 | INFO     | event service: False
[2026-01-10 09:50:38] 2026-01-10 14:50:03,743 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 5287: 2312226, 5290: 2321220, 5293: 2321276, 5306: 2321650}
[2026-01-10 09:50:38] 2026-01-10 14:50:03,743 | INFO     | --------------------------------------------------
[2026-01-10 09:50:38] 2026-01-10 14:50:03,743 | INFO     | 
[2026-01-10 09:50:38] 2026-01-10 14:50:03,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:50:38] 2026-01-10 14:50:03,765 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,765 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,765 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,767 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:50:38] 2026-01-10 14:50:03,767 | INFO     | job 6965384110 has completed (purged errors)
[2026-01-10 09:50:38] 2026-01-10 14:50:03,767 | INFO     | overall cleanup function is called
[2026-01-10 09:50:38] 2026-01-10 14:50:04,815 | INFO     | --- collectZombieJob: --- 10, [1767803]
[2026-01-10 09:50:38] 2026-01-10 14:50:04,815 | INFO     | zombie collector waiting for pid 1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:04,815 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:50:38] 2026-01-10 14:50:04,815 | INFO     | collected zombie processes
[2026-01-10 09:50:38] 2026-01-10 14:50:04,815 | INFO     | will attempt to kill all subprocesses of pid=1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:06,365 | INFO     | process IDs to be killed: [1767803] (in reverse order)
[2026-01-10 09:50:38] 2026-01-10 14:50:06,539 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:50:38] 2026-01-10 14:50:06,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:50:38] 2026-01-10 14:50:06,593 | INFO     | did not find any defunct processes belonging to 1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:06,615 | INFO     | did not find any defunct processes belonging to 1767803
[2026-01-10 09:50:38] 2026-01-10 14:50:06,616 | INFO     | ready for new job
[2026-01-10 09:50:38] 2026-01-10 14:50:06,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:50:38] 2026-01-10 14:50:06,618 | INFO     | ***************************************
[2026-01-10 09:50:38] 2026-01-10 14:50:06,618 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:50:38] 2026-01-10 14:50:06,618 | INFO     | ***************************************
[2026-01-10 09:50:38] 2026-01-10 14:50:06,618 | INFO     | 
[2026-01-10 09:50:38] 2026-01-10 14:50:06,624 | INFO     | architecture information:
[2026-01-10 09:50:38] 2026-01-10 14:50:06,624 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:50:38] 2026-01-10 14:50:06,692 | INFO     | cat /etc/os-release:
[2026-01-10 09:50:38] NAME="CentOS Linux"
[2026-01-10 09:50:38] VERSION="7 (Core)"
[2026-01-10 09:50:38] ID="centos"
[2026-01-10 09:50:38] ID_LIKE="rhel fedora"
[2026-01-10 09:50:38] VERSION_ID="7"
[2026-01-10 09:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:50:38] ANSI_COLOR="0;31"
[2026-01-10 09:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:50:38] HOME_URL="https://www.centos.org/"
[2026-01-10 09:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:50:38] 
[2026-01-10 09:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:50:38] 
[2026-01-10 09:50:38] 2026-01-10 14:50:06,693 | INFO     | ***************************************
[2026-01-10 09:50:38] 2026-01-10 14:50:07,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:50:38] 2026-01-10 14:50:07,298 | INFO     | sufficient remaining disk space (75543609344 B)
[2026-01-10 09:50:38] 2026-01-10 14:50:07,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:50:38] 2026-01-10 14:50:07,299 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:50:38] 2026-01-10 14:50:07,299 | INFO     | update_server=False
[2026-01-10 09:50:38] 2026-01-10 14:50:07,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:50:38] 2026-01-10 14:50:07,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:50:38] 2026-01-10 14:50:07,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:38] 2026-01-10 14:50:07,305 | INFO     | aborting loop
[2026-01-10 09:50:38] 2026-01-10 14:50:07,728 | INFO     | all data control threads have been joined
[2026-01-10 09:50:38] 2026-01-10 14:50:08,305 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,311 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:50:38] 2026-01-10 14:50:08,400 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,480 | INFO     | all payload control threads have been joined
[2026-01-10 09:50:38] 2026-01-10 14:50:08,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,692 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,734 | INFO     | [data] control thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:38] 2026-01-10 14:50:08,800 | INFO     | all job control threads have been joined
[2026-01-10 09:50:38] 2026-01-10 14:50:08,826 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:08,977 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,021 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,476 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,486 | INFO     | [payload] control thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,668 | INFO     | [job] validate thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,761 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:09,806 | INFO     | [job] control thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:10,402 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:11,309 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:50:38] 2026-01-10 14:50:31,244 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:50:38] 2026-01-10 14:50:32,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613599680320)>', '<ExcThread(monitor, started 140613110449920)>']
[2026-01-10 09:50:38] 2026-01-10 14:50:37,265 | INFO     | all workflow threads have been joined
[2026-01-10 09:50:38] 2026-01-10 14:50:37,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:50:38] 2026-01-10 14:50:37,266 | INFO     | traces error code: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:37,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:50:38] 2026-01-10 14:50:37,628 | INFO     | PID=1751294 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | INFO     | .. there are 17 such processes running
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:50:38] 2026-01-10 14:50:37,629 | INFO     | [monitor] control thread has ended
[2026-01-10 09:50:38] 2026-01-10 14:50:37,778 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:50:38] 2026-01-10 14:50:37,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:50:38] 2026-01-10 14:50:37,846 [wrapper] pilotpid: 1751294
[2026-01-10 09:50:38] 2026-01-10 14:50:37,883 [wrapper] Pilot exit status: 0
[2026-01-10 09:50:38] 2026-01-10 14:50:37,914 [wrapper] pandaids: 6965384110
[2026-01-10 09:50:38] 2026-01-10 14:50:38,170 [wrapper] cleanup supervisor_pilot 2082734 1751295
[2026-01-10 09:50:38] 2026-01-10 14:50:38,176 [wrapper] Test setup, not cleaning
[2026-01-10 09:50:38] 2026-01-10 14:50:38,181 [wrapper] apfmon messages muted
[2026-01-10 09:50:38] 2026-01-10 14:50:38,184 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:50:38] 2026-01-10 14:50:38,186 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:50:38]  *** Error codes and diagnostics ***
[2026-01-10 09:50:38]     "exeErrorCode": 0,
[2026-01-10 09:50:38]     "exeErrorDiag": "",
[2026-01-10 09:50:38]     "pilotErrorCode": 0,
[2026-01-10 09:50:38]     "pilotErrorDiag": "",
[2026-01-10 09:50:38]  *** Listing of results directory ***
[2026-01-10 09:50:38] total 435884
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:50:38] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:50:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:21 EVNT.47962006._000079.pool.root.1
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:50:38] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:21 shared
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:21 input.tar.gz
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:21 boinc_lockfile
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas    989556 Jan 10 08:21 agis_schedconf.cvmfs.json
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:50:38] drwx------. 5 boincer umatlas      4096 Jan 10 08:21 pilot3
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:41 boinc_task_state.xml
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas  48008835 Jan 10 09:49 HITS.47962010._002251.pool.root.1
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas      1051 Jan 10 09:49 memory_monitor_summary.json
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas   1300450 Jan 10 09:49 log.47962010._002251.job.log.tgz.1
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas        95 Jan 10 09:49 pilot_heartbeat.json
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas      6944 Jan 10 09:49 init_data.xml
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas      8547 Jan 10 09:50 heartbeat.json
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas       823 Jan 10 09:50 pilotlog.txt
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:50 boinc_mmap_file
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:50 wrapper_checkpoint.txt
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas    738071 Jan 10 09:50 log.47962010._002251.job.log.1
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas       353 Jan 10 09:50 output.list
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:50 runtime_log
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas   2058240 Jan 10 09:50 result.tar.gz
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas      9337 Jan 10 09:50 runtime_log.err
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas       651 Jan 10 09:50 F60MDmPyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwnmKDmSoYwxn.diag
[2026-01-10 09:50:38] -rw-r--r--. 1 boincer umatlas     22416 Jan 10 09:50 stderr.txt
[2026-01-10 09:50:38] HITS file was successfully produced:
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas 48008835 Jan 10 09:49 shared/HITS.pool.root.1
[2026-01-10 09:50:38]  *** Contents of shared directory: ***
[2026-01-10 09:50:38] total 430692
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:21 ATLAS.root_0
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 09:50:38] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:21 input.tar.gz
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas  48008835 Jan 10 09:49 HITS.pool.root.1
[2026-01-10 09:50:38] -rw-------. 1 boincer umatlas   2058240 Jan 10 09:50 result.tar.gz
09:50:40 (1738089): run_atlas exited; CPU time 12525.407568
09:50:40 (1738089): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN