Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:18 (983): wrapper (7.7.26015): starting
08:20:18 (983): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:20:18] Arguments: --nthreads 8
[2026-01-10 08:20:18] Threads: 8
[2026-01-10 08:20:18] Checking for CVMFS
[2026-01-10 08:20:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:20:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:20:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:20:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:20:19] 2.11.2.0 4697 182517 136888 154981 0 13 16703846 18432000 1833 130560 0 123033643 99.980 7116585 34210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:20:19] CVMFS is ok
[2026-01-10 08:20:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:20:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:20:19] Further information can be found at the LHC@home message board.
[2026-01-10 08:20:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:20:19] Checking for apptainer binary...
[2026-01-10 08:20:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:20:19] Running /usr/bin/apptainer --version
[2026-01-10 08:20:19] apptainer version 1.3.2-1.el7
[2026-01-10 08:20:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:20:20] c-206-21.aglt2.org
[2026-01-10 08:20:20] apptainer works
[2026-01-10 08:20:20] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:20:20] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:20:20] Starting ATLAS job with PandaID=6965383969
[2026-01-10 08:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:43:46]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:43:46] 2026-01-10 14:42:42,702 | INFO     |  -- lfn=log.47962010._002110.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:43:46] 2026-01-10 14:42:42,702 | INFO     | stage-out finished correctly
[2026-01-10 09:43:46] 2026-01-10 14:42:43,357 | WARNING  | process 11550 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 09:43:46] 2026-01-10 14:42:43,358 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383969/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,359 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383969/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,360 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-10 09:43:46] 2026-01-10 14:42:43,360 | WARNING  | maxPSS not found in memory monitor output
[2026-01-10 09:43:46] 2026-01-10 14:42:43,360 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3208850 B
[2026-01-10 09:43:46] 2026-01-10 14:42:43,361 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 161811 B
[2026-01-10 09:43:46] 2026-01-10 14:42:43,361 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13723 B
[2026-01-10 09:43:46] 2026-01-10 14:42:43,361 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:43:46] 2026-01-10 14:42:43,374 | INFO     | sufficient remaining disk space (28004319232 B)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,374 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,377 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6965383969: 6712716 B (within 4404019200 B limit)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,377 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6965383969/HITS.47962010._002110.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,377 | INFO     | total size of present files: 0 B (workdir size: 6712716 B)
[2026-01-10 09:43:46] 2026-01-10 14:42:43,377 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6965383969/HITS.47962010._002110.pool.root.1 since it does not exist
[2026-01-10 09:43:46] 2026-01-10 14:42:43,544 | INFO     | number of running child processes to parent process 11550: 1
[2026-01-10 09:43:46] 2026-01-10 14:42:43,544 | INFO     | maximum number of monitored processes: 16
[2026-01-10 09:43:46] 2026-01-10 14:42:44,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:43:46] 2026-01-10 14:42:44,598 | INFO     | time since job start (4933s) is within the limit (349056.0s)
[2026-01-10 09:43:46] 2026-01-10 14:42:44,972 | INFO     | job 6965383969 has state=finished
[2026-01-10 09:43:46] 2026-01-10 14:42:44,972 | INFO     | preparing for final server update for job 6965383969 in state='finished'
[2026-01-10 09:43:46] 2026-01-10 14:42:45,036 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 09:43:46] 2026-01-10 14:42:45,037 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:43:46] 2026-01-10 14:42:45,037 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:43:46] 2026-01-10 14:42:45,037 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:43:46] 2026-01-10 14:42:45,038 | INFO     | job 6965383969 has finished - writing final server update
[2026-01-10 09:43:46] 2026-01-10 14:42:45,038 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:43:46] 2026-01-10 14:42:45,039 | INFO     | executing command: lscpu
[2026-01-10 09:43:46] 2026-01-10 14:42:45,067 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:43:46] 2026-01-10 14:42:46,047 | INFO     | monitor loop #358: job 0:6965383969 is in state 'finished'
[2026-01-10 09:43:46] 2026-01-10 14:42:46,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:46] 2026-01-10 14:42:46,603 | INFO     | time since job start (4935s) is within the limit (349056.0s)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,549 | INFO     | monitor loop #359: job 0:6965383969 is in state 'finished'
[2026-01-10 09:43:46] 2026-01-10 14:42:48,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,608 | INFO     | time since job start (4937s) is within the limit (349056.0s)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,829 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:43:46] 2026-01-10 14:42:48,832 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.5
[2026-01-10 09:43:46] 2026-01-10 14:42:48,835 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383969/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,836 | INFO     | extracted standard info from prmon json
[2026-01-10 09:43:46] 2026-01-10 14:42:48,836 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:43:46] 2026-01-10 14:42:48,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:43:46] 2026-01-10 14:42:48,837 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:43:46] 2026-01-10 14:42:48,838 | INFO     | sum of square deviations: 125589407.09459445
[2026-01-10 09:43:46] 2026-01-10 14:42:48,838 | INFO     | sum of deviations: -17811012820.972973
[2026-01-10 09:43:46] 2026-01-10 14:42:48,838 | INFO     | mean x: 1768053789.2297297
[2026-01-10 09:43:46] 2026-01-10 14:42:48,838 | INFO     | mean y: 2512041.3513513515
[2026-01-10 09:43:46] 2026-01-10 14:42:48,838 | INFO     | intersect: 250746817923.94495
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | chi2: 1.0484063693135275
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | current memory leak: -141.82 B/s (using 74 data points, chi2=1.05)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | could have reported an average CPU frequency of 2511 MHz (6 samples)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | ..............................
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | . Timing measurements:
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | . get job = 0 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | . initial setup = 2 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,839 | INFO     | . payload setup = 5 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,840 | INFO     | . stage-in = 0 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,840 | INFO     | . payload execution = 4905 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,840 | INFO     | . stage-out = 0 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,840 | INFO     | . log creation = 0 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,840 | INFO     | ..............................
[2026-01-10 09:43:46] 2026-01-10 14:42:48,942 | INFO     | 
[2026-01-10 09:43:46] 2026-01-10 14:42:48,942 | INFO     | job summary report
[2026-01-10 09:43:46] 2026-01-10 14:42:48,942 | INFO     | --------------------------------------------------
[2026-01-10 09:43:46] 2026-01-10 14:42:48,942 | INFO     | PanDA job id: 6965383969
[2026-01-10 09:43:46] 2026-01-10 14:42:48,943 | INFO     | task id: 47962010
[2026-01-10 09:43:46] 2026-01-10 14:42:48,943 | INFO     | errors: (none)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,943 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:43:46] 2026-01-10 14:42:48,943 | INFO     | pilot state: finished 
[2026-01-10 09:43:46] 2026-01-10 14:42:48,943 | INFO     | transexitcode: 0
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | exeerrorcode: 0
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | exeerrordiag: 
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | exitcode: 0
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | exitmsg: OK
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | cpuconsumptiontime: 31577 s
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | nevents: 50
[2026-01-10 09:43:46] 2026-01-10 14:42:48,944 | INFO     | neventsw: 0
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | pid: 11550
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | pgrp: 11550
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | corecount: 8
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | event service: False
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | sizes: {0: 2284398, 1: 2284597, 4: 2284859, 12: 2284887, 4915: 2311931, 4916: 2320925, 4917: 2321137, 4922: 2321383}
[2026-01-10 09:43:46] 2026-01-10 14:42:48,945 | INFO     | --------------------------------------------------
[2026-01-10 09:43:46] 2026-01-10 14:42:48,946 | INFO     | 
[2026-01-10 09:43:46] 2026-01-10 14:42:48,946 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:43:46] 2026-01-10 14:42:48,969 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,969 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,969 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,969 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,972 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,972 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:43:46] 2026-01-10 14:42:48,972 | INFO     | job 6965383969 has completed (purged errors)
[2026-01-10 09:43:46] 2026-01-10 14:42:48,973 | INFO     | overall cleanup function is called
[2026-01-10 09:43:46] 2026-01-10 14:42:49,987 | INFO     | --- collectZombieJob: --- 10, [11550]
[2026-01-10 09:43:46] 2026-01-10 14:42:49,987 | INFO     | zombie collector waiting for pid 11550
[2026-01-10 09:43:46] 2026-01-10 14:42:49,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:43:46] 2026-01-10 14:42:49,988 | INFO     | collected zombie processes
[2026-01-10 09:43:46] 2026-01-10 14:42:49,988 | INFO     | will attempt to kill all subprocesses of pid=11550
[2026-01-10 09:43:46] 2026-01-10 14:42:50,160 | INFO     | process IDs to be killed: [11550] (in reverse order)
[2026-01-10 09:43:46] 2026-01-10 14:42:50,209 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:43:46] 2026-01-10 14:42:50,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:43:46] 2026-01-10 14:42:50,215 | INFO     | did not find any defunct processes belonging to 11550
[2026-01-10 09:43:46] 2026-01-10 14:42:50,220 | INFO     | did not find any defunct processes belonging to 11550
[2026-01-10 09:43:46] 2026-01-10 14:42:50,220 | INFO     | ready for new job
[2026-01-10 09:43:46] 2026-01-10 14:42:50,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:43:46] 2026-01-10 14:42:50,222 | INFO     | ***************************************
[2026-01-10 09:43:46] 2026-01-10 14:42:50,222 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:43:46] 2026-01-10 14:42:50,222 | INFO     | ***************************************
[2026-01-10 09:43:46] 2026-01-10 14:42:50,222 | INFO     | 
[2026-01-10 09:43:46] 2026-01-10 14:42:50,223 | INFO     | architecture information:
[2026-01-10 09:43:46] 2026-01-10 14:42:50,224 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:43:46] 2026-01-10 14:42:50,238 | INFO     | cat /etc/os-release:
[2026-01-10 09:43:46] NAME="CentOS Linux"
[2026-01-10 09:43:46] VERSION="7 (Core)"
[2026-01-10 09:43:46] ID="centos"
[2026-01-10 09:43:46] ID_LIKE="rhel fedora"
[2026-01-10 09:43:46] VERSION_ID="7"
[2026-01-10 09:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:43:46] ANSI_COLOR="0;31"
[2026-01-10 09:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:43:46] HOME_URL="https://www.centos.org/"
[2026-01-10 09:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:43:46] 
[2026-01-10 09:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:43:46] 
[2026-01-10 09:43:46] 2026-01-10 14:42:50,238 | INFO     | ***************************************
[2026-01-10 09:43:46] 2026-01-10 14:42:50,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:43:46] 2026-01-10 14:42:50,757 | INFO     | sufficient remaining disk space (28009562112 B)
[2026-01-10 09:43:46] 2026-01-10 14:42:50,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:43:46] 2026-01-10 14:42:50,757 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:43:46] 2026-01-10 14:42:50,757 | INFO     | update_server=False
[2026-01-10 09:43:46] 2026-01-10 14:42:50,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:43:46] 2026-01-10 14:42:50,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:46] 2026-01-10 14:42:50,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:43:46] 2026-01-10 14:42:50,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:43:46] 2026-01-10 14:42:51,052 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:43:46] 2026-01-10 14:42:51,053 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:43:46] 2026-01-10 14:42:51,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:46] 2026-01-10 14:42:51,053 | INFO     | will abort loop
[2026-01-10 09:43:46] 2026-01-10 14:42:51,100 | INFO     | all data control threads have been joined
[2026-01-10 09:43:46] 2026-01-10 14:42:51,763 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:51,763 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:51,837 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:51,974 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,021 | INFO     | all payload control threads have been joined
[2026-01-10 09:43:46] 2026-01-10 14:42:52,058 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,106 | INFO     | [data] control thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,355 | INFO     | all job control threads have been joined
[2026-01-10 09:43:46] 2026-01-10 14:42:52,494 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,534 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,587 | INFO     | [job] validate thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:52,811 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:53,027 | INFO     | [payload] control thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:53,158 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:53,160 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:53,360 | INFO     | [job] control thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:42:54,765 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:43:01,746 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:43:46] 2026-01-10 14:43:02,752 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:43:46] 2026-01-10 14:43:21,842 | INFO     | PID=5117 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 09:43:46] 2026-01-10 14:43:21,842 | INFO     | .. there are 3 such processes running
[2026-01-10 09:43:46] 2026-01-10 14:43:21,843 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:43:46] 2026-01-10 14:43:21,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:43:46] 2026-01-10 14:43:21,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:43:46] 2026-01-10 14:43:39,192 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:43:46] 2026-01-10 14:43:41,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687657948992)>', '<ExcThread(monitor, started 140687081203456)>']
[2026-01-10 09:43:46] 2026-01-10 14:43:41,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:43:46] 2026-01-10 14:43:41,943 | INFO     | [monitor] control thread has ended
[2026-01-10 09:43:46] 2026-01-10 14:43:46,308 | INFO     | all workflow threads have been joined
[2026-01-10 09:43:46] 2026-01-10 14:43:46,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:43:46] 2026-01-10 14:43:46,309 | INFO     | traces error code: 0
[2026-01-10 09:43:46] 2026-01-10 14:43:46,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:43:46] 2026-01-10 14:43:46,427 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:43:46] 2026-01-10 14:43:46,429 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:43:46] 2026-01-10 14:43:46,432 [wrapper] pilotpid: 5117
[2026-01-10 09:43:46] 2026-01-10 14:43:46,435 [wrapper] Pilot exit status: 0
[2026-01-10 09:43:46] 2026-01-10 14:43:46,449 [wrapper] pandaids: 6965383969
[2026-01-10 09:43:46] 2026-01-10 14:43:46,489 [wrapper] cleanup supervisor_pilot 16096 5118
[2026-01-10 09:43:46] 2026-01-10 14:43:46,492 [wrapper] Test setup, not cleaning
[2026-01-10 09:43:46] 2026-01-10 14:43:46,494 [wrapper] apfmon messages muted
[2026-01-10 09:43:46] 2026-01-10 14:43:46,496 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:43:46] 2026-01-10 14:43:46,498 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:43:46]  *** Error codes and diagnostics ***
[2026-01-10 09:43:46]     "exeErrorCode": 0,
[2026-01-10 09:43:46]     "exeErrorDiag": "",
[2026-01-10 09:43:46]     "pilotErrorCode": 0,
[2026-01-10 09:43:46]     "pilotErrorDiag": "",
[2026-01-10 09:43:46]  *** Listing of results directory ***
[2026-01-10 09:43:46] total 433636
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:43:46] -rwx------ 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:43:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:20 run_atlas
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:20 job.xml
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas 394320947 Jan 10 08:20 EVNT.47962006._000059.pool.root.1
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:43:46] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:20 shared
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas    592623 Jan 10 08:20 input.tar.gz
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:20 boinc_lockfile
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas      2890 Jan 10 08:20 pandaJob.out
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas        57 Jan 10 08:20 setup.sh.local
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas    989556 Jan 10 08:20 agis_schedconf.cvmfs.json
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas   1516240 Jan 10 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:43:46] drwx------ 5 boincer umatlas      4096 Jan 10 08:20 pilot3
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas       529 Jan 10 09:26 boinc_task_state.xml
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 09:38 init_data.xml
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas  41891689 Jan 10 09:42 HITS.47962010._002110.pool.root.1
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas      1049 Jan 10 09:42 memory_monitor_summary.json
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas   1218813 Jan 10 09:42 log.47962010._002110.job.log.tgz.1
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas      8633 Jan 10 09:42 heartbeat.json
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas        95 Jan 10 09:43 pilot_heartbeat.json
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:43 wrapper_checkpoint.txt
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:43 boinc_mmap_file
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas      5078 Jan 10 09:43 pilotlog.txt
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas    733948 Jan 10 09:43 log.47962010._002110.job.log.1
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas       353 Jan 10 09:43 output.list
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:43 runtime_log
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas   1976320 Jan 10 09:43 result.tar.gz
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 09:43 runtime_log.err
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas       659 Jan 10 09:43 bImNDmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAYhKDmjnb9zn.diag
[2026-01-10 09:43:46] -rw-r--r-- 1 boincer umatlas     22498 Jan 10 09:43 stderr.txt
[2026-01-10 09:43:46] HITS file was successfully produced:
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas 41891689 Jan 10 09:42 shared/HITS.pool.root.1
[2026-01-10 09:43:46]  *** Contents of shared directory: ***
[2026-01-10 09:43:46] total 428524
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas 394320947 Jan 10 08:20 ATLAS.root_0
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:43:46] -rw-r--r-- 2 boincer umatlas    592623 Jan 10 08:20 input.tar.gz
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas  41891689 Jan 10 09:42 HITS.pool.root.1
[2026-01-10 09:43:46] -rw------- 1 boincer umatlas   1976320 Jan 10 09:43 result.tar.gz
09:43:48 (983): run_atlas exited; CPU time 31556.187602
09:43:48 (983): called boinc_finish(0)

</stderr_txt>
]]>

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