Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:59 (794618): wrapper (7.7.26015): starting
08:20:59 (794618): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:20:59] Arguments: --nthreads 8
[2026-01-10 08:20:59] Threads: 8
[2026-01-10 08:20:59] Checking for CVMFS
[2026-01-10 08:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:00] 2.13.3.0 12204 24373 229424 154981 1 321 35414049 40960001 18756 16776704 0 95331245 99.669 95791008 35426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:21:00] CVMFS is ok
[2026-01-10 08:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:00] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:00] Checking for apptainer binary...
[2026-01-10 08:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:00] Running /usr/bin/apptainer --version
[2026-01-10 08:21:00] apptainer version 1.4.5-2.el9
[2026-01-10 08:21:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:00] c-212-15.aglt2.org
[2026-01-10 08:21:00] apptainer works
[2026-01-10 08:21:00] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:21:00] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:21:00] Starting ATLAS job with PandaID=6965383942
[2026-01-10 08:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:26:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:26:25]  storage_token=
[2026-01-10 09:26:25]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965383942/log.47962010._002083.job.log.tgz.1
[2026-01-10 09:26:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f9/ce/log.47962010._002083.job.log.tgz.1
[2026-01-10 09:26:25]  workdir=None
[2026-01-10 09:26:25] ]
[2026-01-10 09:26:25] 2026-01-10 14:25:37,420 | INFO     | transferring file log.47962010._002083.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965383942/log.47962010._002083.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:26:25] 2026-01-10 14:25:37,420 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965383942/log.47962010._002083.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002083.job
[2026-01-10 09:26:25] 2026-01-10 14:25:37,505 | INFO     | adding to output.list: log.47962010._002083.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f9/ce/log.47962010._002083.job.log.tgz.
[2026-01-10 09:26:25] 2026-01-10 14:25:37,506 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:26:25] 2026-01-10 14:25:37,506 | INFO     | summary of transferred files:
[2026-01-10 09:26:25] 2026-01-10 14:25:37,506 | INFO     |  -- lfn=log.47962010._002083.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:26:25] 2026-01-10 14:25:37,506 | INFO     | stage-out finished correctly
[2026-01-10 09:26:25] 2026-01-10 14:25:38,455 | INFO     | monitor loop #252: job 0:6965383942 is in state 'finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:38,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:26:25] 2026-01-10 14:25:39,157 | INFO     | time since job start (3866s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:39,738 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:26:25] 2026-01-10 14:25:39,843 | INFO     | job 6965383942 has state=finished
[2026-01-10 09:26:25] 2026-01-10 14:25:39,843 | INFO     | preparing for final server update for job 6965383942 in state='finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:39,844 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:26:25] 2026-01-10 14:25:39,844 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:26:25] 2026-01-10 14:25:39,844 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:26:25] 2026-01-10 14:25:39,844 | INFO     | job 6965383942 has finished - writing final server update
[2026-01-10 09:26:25] 2026-01-10 14:25:39,844 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:26:25] 2026-01-10 14:25:39,845 | INFO     | executing command: lscpu
[2026-01-10 09:26:25] 2026-01-10 14:25:39,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:26:25] 2026-01-10 14:25:40,960 | INFO     | monitor loop #253: job 0:6965383942 is in state 'finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:40,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:26:25] 2026-01-10 14:25:41,164 | INFO     | time since job start (3868s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:43,173 | INFO     | time since job start (3870s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:43,465 | INFO     | monitor loop #254: job 0:6965383942 is in state 'finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:43,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:26:25] 2026-01-10 14:25:45,180 | INFO     | time since job start (3872s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:45,970 | INFO     | monitor loop #255: job 0:6965383942 is in state 'finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:45,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:26:25] 2026-01-10 14:25:47,188 | INFO     | time since job start (3874s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:48,475 | INFO     | monitor loop #256: job 0:6965383942 is in state 'finished'
[2026-01-10 09:26:25] 2026-01-10 14:25:48,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,194 | INFO     | time since job start (3876s) is within the limit (349056.0s)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,270 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:26:25] 2026-01-10 14:25:49,284 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3339.6308333333345
[2026-01-10 09:26:25] 2026-01-10 14:25:49,300 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383942/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,301 | INFO     | extracted standard info from prmon json
[2026-01-10 09:26:25] 2026-01-10 14:25:49,301 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:26:25] 2026-01-10 14:25:49,301 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:26:25] 2026-01-10 14:25:49,322 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:26:25] 2026-01-10 14:25:49,323 | INFO     | sum of square deviations: 54383327.714285694
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | sum of deviations: 532121567.7142854
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | mean x: 1768053288.9285715
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | mean y: 2539525.4285714286
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | intersect: -17297234641.570972
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | chi2: 0.21058345248186816
[2026-01-10 09:26:25] 2026-01-10 14:25:49,324 | INFO     | current memory leak: 9.78 B/s (using 56 data points, chi2=0.21)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,325 | INFO     | could have reported an average CPU frequency of 3258 MHz (6 samples)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,325 | INFO     | ..............................
[2026-01-10 09:26:25] 2026-01-10 14:25:49,325 | INFO     | . Timing measurements:
[2026-01-10 09:26:25] 2026-01-10 14:25:49,325 | INFO     | . get job = 0 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,325 | INFO     | . initial setup = 2 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | . payload setup = 7 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | . stage-in = 0 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | . payload execution = 3833 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | . stage-out = 0 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | . log creation = 0 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,326 | INFO     | ..............................
[2026-01-10 09:26:25] 2026-01-10 14:25:49,408 | INFO     | 
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | job summary report
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | --------------------------------------------------
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | PanDA job id: 6965383942
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | task id: 47962010
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | errors: (none)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | pilot state: finished 
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | transexitcode: 0
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | exeerrorcode: 0
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | exeerrordiag: 
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | exitcode: 0
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | exitmsg: OK
[2026-01-10 09:26:25] 2026-01-10 14:25:49,410 | INFO     | cpuconsumptiontime: 11084 s
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | nevents: 50
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | neventsw: 0
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | pid: 834136
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | pgrp: 834136
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | corecount: 8
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | event service: False
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | sizes: {0: 2284569, 5: 2284831, 11: 2284887, 3846: 2311450, 3848: 2320444, 3850: 2320500, 3860: 2320874}
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | --------------------------------------------------
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | 
[2026-01-10 09:26:25] 2026-01-10 14:25:49,411 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:26:25] 2026-01-10 14:25:49,461 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,463 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:26:25] 2026-01-10 14:25:49,464 | INFO     | job 6965383942 has completed (purged errors)
[2026-01-10 09:26:25] 2026-01-10 14:25:49,464 | INFO     | overall cleanup function is called
[2026-01-10 09:26:25] 2026-01-10 14:25:50,511 | INFO     | --- collectZombieJob: --- 10, [834136]
[2026-01-10 09:26:25] 2026-01-10 14:25:50,512 | INFO     | zombie collector waiting for pid 834136
[2026-01-10 09:26:25] 2026-01-10 14:25:50,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:26:25] 2026-01-10 14:25:50,513 | INFO     | collected zombie processes
[2026-01-10 09:26:25] 2026-01-10 14:25:50,513 | INFO     | will attempt to kill all subprocesses of pid=834136
[2026-01-10 09:26:25] 2026-01-10 14:25:51,183 | INFO     | PID=803929 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:26:25] 2026-01-10 14:25:51,183 | INFO     | .. there are 20 such processes running
[2026-01-10 09:26:25] 2026-01-10 14:25:51,290 | INFO     | process IDs to be killed: [834136] (in reverse order)
[2026-01-10 09:26:25] 2026-01-10 14:25:51,430 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:26:25] 2026-01-10 14:25:51,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:26:25] 2026-01-10 14:25:51,447 | INFO     | did not find any defunct processes belonging to 834136
[2026-01-10 09:26:25] 2026-01-10 14:25:51,461 | INFO     | did not find any defunct processes belonging to 834136
[2026-01-10 09:26:25] 2026-01-10 14:25:51,461 | INFO     | ready for new job
[2026-01-10 09:26:25] 2026-01-10 14:25:51,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:26:25] 2026-01-10 14:25:51,463 | INFO     | ***************************************
[2026-01-10 09:26:25] 2026-01-10 14:25:51,463 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:26:25] 2026-01-10 14:25:51,463 | INFO     | ***************************************
[2026-01-10 09:26:25] 2026-01-10 14:25:51,463 | INFO     | 
[2026-01-10 09:26:25] 2026-01-10 14:25:51,468 | INFO     | architecture information:
[2026-01-10 09:26:25] 2026-01-10 14:25:51,468 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:26:25] 2026-01-10 14:25:51,517 | INFO     | cat /etc/os-release:
[2026-01-10 09:26:25] NAME="CentOS Linux"
[2026-01-10 09:26:25] VERSION="7 (Core)"
[2026-01-10 09:26:25] ID="centos"
[2026-01-10 09:26:25] ID_LIKE="rhel fedora"
[2026-01-10 09:26:25] VERSION_ID="7"
[2026-01-10 09:26:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:26:25] ANSI_COLOR="0;31"
[2026-01-10 09:26:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:26:25] HOME_URL="https://www.centos.org/"
[2026-01-10 09:26:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:26:25] 
[2026-01-10 09:26:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:26:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:26:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:26:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:26:25] 
[2026-01-10 09:26:25] 2026-01-10 14:25:51,517 | INFO     | ***************************************
[2026-01-10 09:26:25] 2026-01-10 14:25:52,021 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:26:25] 2026-01-10 14:25:52,042 | INFO     | sufficient remaining disk space (127972409344 B)
[2026-01-10 09:26:25] 2026-01-10 14:25:52,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:26:25] 2026-01-10 14:25:52,042 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | INFO     | update_server=False
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:26:25] 2026-01-10 14:25:52,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:26:25] 2026-01-10 14:25:52,044 | INFO     | aborting loop
[2026-01-10 09:26:25] 2026-01-10 14:25:52,196 | INFO     | all job control threads have been joined
[2026-01-10 09:26:25] 2026-01-10 14:25:52,687 | INFO     | all data control threads have been joined
[2026-01-10 09:26:25] 2026-01-10 14:25:52,863 | INFO     | all payload control threads have been joined
[2026-01-10 09:26:25] 2026-01-10 14:25:53,049 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,054 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,112 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:26:25] 2026-01-10 14:25:53,202 | INFO     | [job] control thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,239 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,293 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,693 | INFO     | [data] control thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:53,869 | INFO     | [payload] control thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:54,114 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:54,136 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:54,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:26:25] 2026-01-10 14:25:54,447 | INFO     | [job] validate thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:54,474 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:54,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:26:25] 2026-01-10 14:25:55,204 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:55,431 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:25:58,877 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:26:02,254 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:26:25] 2026-01-10 14:26:03,269 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:26:25] 2026-01-10 14:26:19,213 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:26:25] 2026-01-10 14:26:19,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939380164416)>', '<ExcThread(monitor, started 139938993518336)>']
[2026-01-10 09:26:25] 2026-01-10 14:26:20,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:26:25] 2026-01-10 14:26:20,214 | INFO     | [monitor] control thread has ended
[2026-01-10 09:26:25] 2026-01-10 14:26:24,769 | INFO     | all workflow threads have been joined
[2026-01-10 09:26:25] 2026-01-10 14:26:24,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:26:25] 2026-01-10 14:26:24,770 | INFO     | traces error code: 0
[2026-01-10 09:26:25] 2026-01-10 14:26:24,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:26:25] 2026-01-10 14:26:24,979 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:26:25] 2026-01-10 14:26:24,988 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:26:25] 2026-01-10 14:26:24,991 [wrapper] pilotpid: 803929
[2026-01-10 09:26:25] 2026-01-10 14:26:24,993 [wrapper] Pilot exit status: 0
[2026-01-10 09:26:25] 2026-01-10 14:26:25,011 [wrapper] pandaids: 6965383942
[2026-01-10 09:26:25] 2026-01-10 14:26:25,130 [wrapper] cleanup supervisor_pilot 1293204 803930
[2026-01-10 09:26:25] 2026-01-10 14:26:25,148 [wrapper] Test setup, not cleaning
[2026-01-10 09:26:25] 2026-01-10 14:26:25,155 [wrapper] apfmon messages muted
[2026-01-10 09:26:25] 2026-01-10 14:26:25,158 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:26:25] 2026-01-10 14:26:25,161 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:26:25]  *** Error codes and diagnostics ***
[2026-01-10 09:26:25]     "exeErrorCode": 0,
[2026-01-10 09:26:25]     "exeErrorDiag": "",
[2026-01-10 09:26:25]     "pilotErrorCode": 0,
[2026-01-10 09:26:25]     "pilotErrorDiag": "",
[2026-01-10 09:26:25]  *** Listing of results directory ***
[2026-01-10 09:26:25] total 428592
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:26:25] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:26:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:20 run_atlas
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:20 job.xml
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas 389451780 Jan 10 08:20 EVNT.47962006._000055.pool.root.1
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:20 input.tar.gz
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:26:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:20 shared
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:20 boinc_lockfile
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas    989556 Jan 10 08:21 agis_schedconf.cvmfs.json
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:26:25] drwx------. 5 boincer umatlas      4096 Jan 10 08:21 pilot3
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas       529 Jan 10 09:18 boinc_task_state.xml
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas      6957 Jan 10 09:18 init_data.xml
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas        95 Jan 10 09:25 pilot_heartbeat.json
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas  42022543 Jan 10 09:25 HITS.47962010._002083.pool.root.1
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas      1036 Jan 10 09:25 memory_monitor_summary.json
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas   1179015 Jan 10 09:25 log.47962010._002083.job.log.tgz.1
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas      8534 Jan 10 09:25 heartbeat.json
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas      4625 Jan 10 09:26 pilotlog.txt
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:26 boinc_mmap_file
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:26 wrapper_checkpoint.txt
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas    562503 Jan 10 09:26 log.47962010._002083.job.log.1
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas       353 Jan 10 09:26 output.list
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:26 runtime_log
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas   1761280 Jan 10 09:26 result.tar.gz
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 09:26 runtime_log.err
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas       653 Jan 10 09:26 nIBNDmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwXhKDmEWbxXo.diag
[2026-01-10 09:26:25] -rw-r--r--. 1 boincer umatlas     22309 Jan 10 09:26 stderr.txt
[2026-01-10 09:26:25] HITS file was successfully produced:
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas 42022543 Jan 10 09:25 shared/HITS.pool.root.1
[2026-01-10 09:26:25]  *** Contents of shared directory: ***
[2026-01-10 09:26:25] total 423688
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas 389451780 Jan 10 08:20 ATLAS.root_0
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 08:20 input.tar.gz
[2026-01-10 09:26:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas  42022543 Jan 10 09:25 HITS.pool.root.1
[2026-01-10 09:26:25] -rw-------. 1 boincer umatlas   1761280 Jan 10 09:26 result.tar.gz
09:26:27 (794618): run_atlas exited; CPU time 11103.851632
09:26:27 (794618): called boinc_finish(0)

</stderr_txt>
]]>

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