Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:20:48 (2594068): wrapper (7.7.26015): starting
08:20:48 (2594068): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 08:20:48] Arguments: --nthreads 11
[2026-01-10 08:20:48] Threads: 11
[2026-01-10 08:20:48] Checking for CVMFS
[2026-01-10 08:20:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:20:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:20:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:20:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:20:50] 2.13.3.0 12977 94900 598392 154981 0 64 19718369 32935937 21053 16776704 0 419887363 99.548 509372291 33654 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:20:50] CVMFS is ok
[2026-01-10 08:20:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:20:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:20:50] Further information can be found at the LHC@home message board.
[2026-01-10 08:20:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:20:50] Checking for apptainer binary...
[2026-01-10 08:20:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:20:50] Running /usr/bin/apptainer --version
[2026-01-10 08:20:50] apptainer version 1.4.5-2.el9
[2026-01-10 08:20:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:20:51] c6-12-29-1.aglt2.org
[2026-01-10 08:20:51] apptainer works
[2026-01-10 08:20:51] Set ATHENA_PROC_NUMBER=11
[2026-01-10 08:20:51] Set ATHENA_CORE_NUMBER=11
[2026-01-10 08:20:51] Starting ATLAS job with PandaID=6965383934
[2026-01-10 08:20:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:50:14]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:50:14] 2026-01-10 14:48:41,284 | INFO     | monitor loop #329: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:41,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:43,033 | INFO     | PID=2598371 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 09:50:14] 2026-01-10 14:48:43,033 | INFO     | .. there are 19 such processes running
[2026-01-10 09:50:14] 2026-01-10 14:48:43,798 | INFO     | monitor loop #330: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:43,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:44,036 | INFO     | time since job start (5206s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:46,055 | INFO     | time since job start (5208s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:46,314 | INFO     | monitor loop #331: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:46,315 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:48,070 | INFO     | time since job start (5210s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:48,819 | INFO     | monitor loop #332: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:48,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:50,092 | INFO     | time since job start (5212s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:51,324 | INFO     | monitor loop #333: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:51,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:52,100 | INFO     | time since job start (5214s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:53,829 | INFO     | monitor loop #334: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:53,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:54,105 | INFO     | time since job start (5216s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:56,112 | INFO     | time since job start (5218s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:56,334 | INFO     | monitor loop #335: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:56,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:48:58,120 | INFO     | time since job start (5220s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:48:58,840 | INFO     | monitor loop #336: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:48:58,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:49:00,134 | INFO     | time since job start (5222s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:49:01,346 | INFO     | monitor loop #337: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:49:01,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:49:02,141 | INFO     | time since job start (5224s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:49:03,852 | INFO     | monitor loop #338: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:49:03,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:49:04,148 | INFO     | time since job start (5226s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:49:06,393 | INFO     | monitor loop #339: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:49:06,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:49:06,811 | INFO     | PID=2598371 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:14] 2026-01-10 14:49:06,812 | INFO     | .. there are 19 such processes running
[2026-01-10 09:50:14] 2026-01-10 14:49:07,812 | INFO     | time since job start (5229s) is within the limit (349056.0s)
[2026-01-10 09:50:14] 2026-01-10 14:49:08,842 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 09:50:14] 2026-01-10 14:49:08,854 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2598.7941875
[2026-01-10 09:50:14] 2026-01-10 14:49:08,898 | INFO     | monitor loop #340: job 0:6965383934 is in state 'finished'
[2026-01-10 09:50:14] 2026-01-10 14:49:08,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:50:14] 2026-01-10 14:49:08,914 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383934/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:50:14] 2026-01-10 14:49:08,915 | INFO     | extracted standard info from prmon json
[2026-01-10 09:50:14] 2026-01-10 14:49:08,915 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:50:14] 2026-01-10 14:49:08,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:50:14] 2026-01-10 14:49:08,918 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:50:14] 2026-01-10 14:49:08,918 | INFO     | sum of square deviations: 136137680.5263159
[2026-01-10 09:50:14] 2026-01-10 14:49:08,918 | INFO     | sum of deviations: 5655073840.894735
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | mean x: 1768054051.5789473
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | mean y: 2876999.6842105263
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | intersect: -73440979085.69485
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | chi2: 1.201428829567699
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | current memory leak: 41.54 B/s (using 76 data points, chi2=1.20)
[2026-01-10 09:50:14] 2026-01-10 14:49:08,919 | INFO     | could have reported an average CPU frequency of 2673 MHz (6 samples)
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | ..............................
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . Timing measurements:
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . get job = 0 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . initial setup = 5 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . payload setup = 41 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . stage-in = 0 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . payload execution = 5083 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . stage-out = 2 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | . log creation = 0 s
[2026-01-10 09:50:14] 2026-01-10 14:49:08,920 | INFO     | ..............................
[2026-01-10 09:50:14] 2026-01-10 14:49:09,493 | INFO     | 
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | job summary report
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | --------------------------------------------------
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | PanDA job id: 6965383934
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | task id: 47962010
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | errors: (none)
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | pilot state: finished 
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | transexitcode: 0
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | exeerrorcode: 0
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | exeerrordiag: 
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | exitcode: 0
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | exitmsg: OK
[2026-01-10 09:50:14] 2026-01-10 14:49:09,494 | INFO     | cpuconsumptiontime: 16686 s
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | nevents: 50
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | neventsw: 0
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | pid: 2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | pgrp: 2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | corecount: 11
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | event service: False
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | sizes: {0: 2284342, 1: 2284398, 2: 2284625, 13: 2284625, 24: 2284681, 31: 2284971, 35: 2285127, 5129: 2312143, 5133: 2321193, 5163: 2321383}
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | --------------------------------------------------
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | 
[2026-01-10 09:50:14] 2026-01-10 14:49:09,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,564 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,565 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:50:14] 2026-01-10 14:49:09,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,566 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:50:14] 2026-01-10 14:49:09,566 | INFO     | job 6965383934 has completed (purged errors)
[2026-01-10 09:50:14] 2026-01-10 14:49:09,566 | INFO     | overall cleanup function is called
[2026-01-10 09:50:14] 2026-01-10 14:49:10,592 | INFO     | --- collectZombieJob: --- 10, [2606515]
[2026-01-10 09:50:14] 2026-01-10 14:49:10,593 | INFO     | zombie collector waiting for pid 2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:10,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:50:14] 2026-01-10 14:49:10,593 | INFO     | collected zombie processes
[2026-01-10 09:50:14] 2026-01-10 14:49:10,593 | INFO     | will attempt to kill all subprocesses of pid=2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:11,610 | INFO     | process IDs to be killed: [2606515] (in reverse order)
[2026-01-10 09:50:14] 2026-01-10 14:49:11,878 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:50:14] 2026-01-10 14:49:11,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:50:14] 2026-01-10 14:49:11,896 | INFO     | did not find any defunct processes belonging to 2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:11,911 | INFO     | did not find any defunct processes belonging to 2606515
[2026-01-10 09:50:14] 2026-01-10 14:49:11,911 | INFO     | ready for new job
[2026-01-10 09:50:14] 2026-01-10 14:49:11,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:50:14] 2026-01-10 14:49:11,913 | INFO     | ***************************************
[2026-01-10 09:50:14] 2026-01-10 14:49:11,913 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:50:14] 2026-01-10 14:49:11,913 | INFO     | ***************************************
[2026-01-10 09:50:14] 2026-01-10 14:49:11,913 | INFO     | 
[2026-01-10 09:50:14] 2026-01-10 14:49:11,919 | INFO     | architecture information:
[2026-01-10 09:50:14] 2026-01-10 14:49:11,920 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:50:14] 2026-01-10 14:49:11,955 | INFO     | cat /etc/os-release:
[2026-01-10 09:50:14] NAME="CentOS Linux"
[2026-01-10 09:50:14] VERSION="7 (Core)"
[2026-01-10 09:50:14] ID="centos"
[2026-01-10 09:50:14] ID_LIKE="rhel fedora"
[2026-01-10 09:50:14] VERSION_ID="7"
[2026-01-10 09:50:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:50:14] ANSI_COLOR="0;31"
[2026-01-10 09:50:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:50:14] HOME_URL="https://www.centos.org/"
[2026-01-10 09:50:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:50:14] 
[2026-01-10 09:50:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:50:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:50:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:50:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:50:14] 
[2026-01-10 09:50:14] 2026-01-10 14:49:11,955 | INFO     | ***************************************
[2026-01-10 09:50:14] 2026-01-10 14:49:12,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 09:50:14] 2026-01-10 14:49:12,512 | INFO     | sufficient remaining disk space (93771005952 B)
[2026-01-10 09:50:14] 2026-01-10 14:49:12,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | INFO     | update_server=False
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | INFO     | aborting loop
[2026-01-10 09:50:14] 2026-01-10 14:49:12,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:50:14] 2026-01-10 14:49:12,831 | INFO     | all payload control threads have been joined
[2026-01-10 09:50:14] 2026-01-10 14:49:13,391 | INFO     | all data control threads have been joined
[2026-01-10 09:50:14] 2026-01-10 14:49:13,393 | INFO     | all job control threads have been joined
[2026-01-10 09:50:14] 2026-01-10 14:49:13,518 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,519 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,520 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,521 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,607 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,837 | INFO     | [payload] control thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:13,936 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,162 | INFO     | [job] validate thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,163 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,186 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,267 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,397 | INFO     | [data] control thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,399 | INFO     | [job] control thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,520 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:14,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:50:14] 2026-01-10 14:49:15,527 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:16,525 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:50:14] 2026-01-10 14:49:42,315 | INFO     | PID=2598371 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:50:14] 2026-01-10 14:49:42,316 | INFO     | .. there are 19 such processes running
[2026-01-10 09:50:14] 2026-01-10 14:49:42,316 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:50:14] 2026-01-10 14:49:42,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:50:14] 2026-01-10 14:49:42,316 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:50:14] 2026-01-10 14:50:06,867 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:50:14] 2026-01-10 14:50:08,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297487177536)>', '<ExcThread(monitor, started 140296742479616)>']
[2026-01-10 09:50:14] 2026-01-10 14:50:08,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:50:14] 2026-01-10 14:50:08,531 | INFO     | [monitor] control thread has ended
[2026-01-10 09:50:14] 2026-01-10 14:50:13,262 | INFO     | all workflow threads have been joined
[2026-01-10 09:50:14] 2026-01-10 14:50:13,263 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:50:14] 2026-01-10 14:50:13,263 | INFO     | traces error code: 0
[2026-01-10 09:50:14] 2026-01-10 14:50:13,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:50:14] 2026-01-10 14:50:13,831 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:50:14] 2026-01-10 14:50:13,841 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:50:14] 2026-01-10 14:50:13,852 [wrapper] pilotpid: 2598371
[2026-01-10 09:50:14] 2026-01-10 14:50:13,869 [wrapper] Pilot exit status: 0
[2026-01-10 09:50:14] 2026-01-10 14:50:13,949 [wrapper] pandaids: 6965383934
[2026-01-10 09:50:14] 2026-01-10 14:50:14,237 [wrapper] cleanup supervisor_pilot 2837704 2598372
[2026-01-10 09:50:14] 2026-01-10 14:50:14,247 [wrapper] Test setup, not cleaning
[2026-01-10 09:50:14] 2026-01-10 14:50:14,262 [wrapper] apfmon messages muted
[2026-01-10 09:50:14] 2026-01-10 14:50:14,277 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:50:14] 2026-01-10 14:50:14,303 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:50:14]  *** Error codes and diagnostics ***
[2026-01-10 09:50:14]     "exeErrorCode": 0,
[2026-01-10 09:50:14]     "exeErrorDiag": "",
[2026-01-10 09:50:14]     "pilotErrorCode": 0,
[2026-01-10 09:50:14]     "pilotErrorDiag": "",
[2026-01-10 09:50:14]  *** Listing of results directory ***
[2026-01-10 09:50:14] total 435488
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 09:50:14] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:50:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:20 run_atlas
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:20 job.xml
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas 391830875 Jan 10 08:20 EVNT.47962006._000054.pool.root.1
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:50:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:20 shared
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 08:20 input.tar.gz
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:20 boinc_lockfile
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:20 pandaJob.out
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas        57 Jan 10 08:20 setup.sh.local
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas    989556 Jan 10 08:21 agis_schedconf.cvmfs.json
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:21 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:50:14] drwx------. 5 boincer umatlas      4096 Jan 10 08:21 pilot3
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:37 boinc_task_state.xml
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas      6879 Jan 10 09:47 init_data.xml
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas  45752657 Jan 10 09:48 HITS.47962010._002075.pool.root.1
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas      1042 Jan 10 09:48 memory_monitor_summary.json
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas   1522881 Jan 10 09:48 log.47962010._002075.job.log.tgz.1
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas        95 Jan 10 09:48 pilot_heartbeat.json
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas      8589 Jan 10 09:49 heartbeat.json
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas        27 Jan 10 09:49 wrapper_checkpoint.txt
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:49 boinc_mmap_file
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas      4824 Jan 10 09:50 pilotlog.txt
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas    696205 Jan 10 09:50 log.47962010._002075.job.log.1
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas       353 Jan 10 09:50 output.list
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:50 runtime_log
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas   2242560 Jan 10 09:50 result.tar.gz
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas       654 Jan 10 09:50 MA0MDmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpXhKDmXNgpBo.diag
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas      9354 Jan 10 09:50 runtime_log.err
[2026-01-10 09:50:14] -rw-r--r--. 1 boincer umatlas     22551 Jan 10 09:50 stderr.txt
[2026-01-10 09:50:14] HITS file was successfully produced:
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas 45752657 Jan 10 09:48 shared/HITS.pool.root.1
[2026-01-10 09:50:14]  *** Contents of shared directory: ***
[2026-01-10 09:50:14] total 430120
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas 391830875 Jan 10 08:20 ATLAS.root_0
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:20 start_atlas.sh
[2026-01-10 09:50:14] -rw-r--r--. 2 boincer umatlas    592612 Jan 10 08:20 input.tar.gz
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas  45752657 Jan 10 09:48 HITS.pool.root.1
[2026-01-10 09:50:14] -rw-------. 1 boincer umatlas   2242560 Jan 10 09:50 result.tar.gz
09:50:16 (2594068): run_atlas exited; CPU time 16808.981558
09:50:16 (2594068): called boinc_finish(0)

</stderr_txt>
]]>

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