Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:12 (2894783): wrapper (7.7.26015): starting
09:35:12 (2894783): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 09:35:12] Arguments: --nthreads 11
[2026-01-10 09:35:12] Threads: 11
[2026-01-10 09:35:12] Checking for CVMFS
[2026-01-10 09:35:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:35:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:35:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:35:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:35:13] 2.13.3.0 5782 22329 183896 154982 2 161 37105280 40960001 8365 16776704 0 24555143 99.702 17161263 39367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 09:35:13] CVMFS is ok
[2026-01-10 09:35:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:35:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:35:13] Further information can be found at the LHC@home message board.
[2026-01-10 09:35:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:35:13] Checking for apptainer binary...
[2026-01-10 09:35:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:35:13] Running /usr/bin/apptainer --version
[2026-01-10 09:35:13] apptainer version 1.4.5-2.el9
[2026-01-10 09:35:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:35:13] c-206-39.aglt2.org
[2026-01-10 09:35:13] apptainer works
[2026-01-10 09:35:13] Set ATHENA_PROC_NUMBER=11
[2026-01-10 09:35:13] Set ATHENA_CORE_NUMBER=11
[2026-01-10 09:35:13] Starting ATLAS job with PandaID=6965383919
[2026-01-10 09:35:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:11:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:11:36] 2026-01-10 15:10:07,670 | INFO     | total number of processed events: 50 (read)
[2026-01-10 10:11:36] 2026-01-10 15:10:07,674 | INFO     | executing command: lscpu
[2026-01-10 10:11:36] 2026-01-10 15:10:07,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:11:36] 2026-01-10 15:10:08,389 | INFO     | monitor loop #155: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:08,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:09,237 | INFO     | time since job start (2083s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:10,893 | INFO     | monitor loop #156: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:10,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:11,243 | INFO     | time since job start (2085s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:13,249 | INFO     | time since job start (2087s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:13,398 | INFO     | monitor loop #157: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:13,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:15,260 | INFO     | time since job start (2089s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:15,903 | INFO     | monitor loop #158: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:15,903 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:17,285 | INFO     | PID=2898700 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:11:36] 2026-01-10 15:10:17,285 | INFO     | .. there are 9 such processes running
[2026-01-10 10:11:36] 2026-01-10 15:10:18,300 | INFO     | time since job start (2092s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:18,442 | INFO     | monitor loop #159: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:18,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:20,307 | INFO     | time since job start (2094s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:20,947 | INFO     | monitor loop #160: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:20,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:22,316 | INFO     | time since job start (2096s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:23,452 | INFO     | monitor loop #161: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:23,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:24,322 | INFO     | time since job start (2098s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:25,960 | INFO     | monitor loop #162: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:25,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:26,328 | INFO     | time since job start (2100s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:28,335 | INFO     | time since job start (2102s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:28,465 | INFO     | monitor loop #163: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:28,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:30,341 | INFO     | time since job start (2104s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:30,970 | INFO     | monitor loop #164: job 0:6965383919 is in state 'finished'
[2026-01-10 10:11:36] 2026-01-10 15:10:30,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:11:36] 2026-01-10 15:10:32,363 | INFO     | time since job start (2106s) is within the limit (349056.0s)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,167 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 10:11:36] 2026-01-10 15:10:33,175 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3255.0581406250003
[2026-01-10 10:11:36] 2026-01-10 15:10:33,198 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965383919/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,199 | INFO     | extracted standard info from prmon json
[2026-01-10 10:11:36] 2026-01-10 15:10:33,199 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:11:36] 2026-01-10 15:10:33,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:11:36] 2026-01-10 15:10:33,200 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | sum of square deviations: 6113187.851851851
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | sum of deviations: -1146799863.4444447
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | mean x: 1768056856.074074
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | mean y: 2978101.222222222
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | intersect: 331680559462.2375
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | chi2: 0.24108715630412542
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | current memory leak: -187.59 B/s (using 27 data points, chi2=0.24)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,201 | INFO     | could have reported an average CPU frequency of 3224 MHz (5 samples)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | ..............................
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . Timing measurements:
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . get job = 0 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . initial setup = 2 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . payload setup = 7 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . stage-in = 0 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . payload execution = 2048 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . stage-out = 1 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | . log creation = 0 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,202 | INFO     | ..............................
[2026-01-10 10:11:36] 2026-01-10 15:10:33,330 | INFO     | 
[2026-01-10 10:11:36] 2026-01-10 15:10:33,330 | INFO     | job summary report
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | --------------------------------------------------
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | PanDA job id: 6965383919
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | task id: 47962010
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | errors: (none)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | pilot state: finished 
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | transexitcode: 0
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | exeerrorcode: 0
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | exeerrordiag: 
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | exitcode: 0
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | exitmsg: OK
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | cpuconsumptiontime: 11364 s
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | nevents: 50
[2026-01-10 10:11:36] 2026-01-10 15:10:33,331 | INFO     | neventsw: 0
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | pid: 2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | pgrp: 2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | corecount: 11
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | event service: False
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | sizes: {0: 2284396, 1: 2284595, 5: 2284857, 11: 2284913, 2060: 2310647, 2062: 2319825, 2091: 2320047}
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | --------------------------------------------------
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | 
[2026-01-10 10:11:36] 2026-01-10 15:10:33,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:11:36] 2026-01-10 15:10:33,517 | INFO     | job 6965383919 has completed (purged errors)
[2026-01-10 10:11:36] 2026-01-10 15:10:33,517 | INFO     | overall cleanup function is called
[2026-01-10 10:11:36] 2026-01-10 15:10:34,536 | INFO     | --- collectZombieJob: --- 10, [2905116]
[2026-01-10 10:11:36] 2026-01-10 15:10:34,536 | INFO     | zombie collector waiting for pid 2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:34,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:11:36] 2026-01-10 15:10:34,536 | INFO     | collected zombie processes
[2026-01-10 10:11:36] 2026-01-10 15:10:34,536 | INFO     | will attempt to kill all subprocesses of pid=2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:34,863 | INFO     | process IDs to be killed: [2905116] (in reverse order)
[2026-01-10 10:11:36] 2026-01-10 15:10:35,164 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:11:36] 2026-01-10 15:10:35,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:11:36] 2026-01-10 15:10:35,180 | INFO     | did not find any defunct processes belonging to 2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:35,197 | INFO     | did not find any defunct processes belonging to 2905116
[2026-01-10 10:11:36] 2026-01-10 15:10:35,197 | INFO     | ready for new job
[2026-01-10 10:11:36] 2026-01-10 15:10:35,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:11:36] 2026-01-10 15:10:35,198 | INFO     | ***************************************
[2026-01-10 10:11:36] 2026-01-10 15:10:35,198 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:11:36] 2026-01-10 15:10:35,198 | INFO     | ***************************************
[2026-01-10 10:11:36] 2026-01-10 15:10:35,199 | INFO     | 
[2026-01-10 10:11:36] 2026-01-10 15:10:35,202 | INFO     | architecture information:
[2026-01-10 10:11:36] 2026-01-10 15:10:35,210 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:11:36] 2026-01-10 15:10:35,311 | INFO     | cat /etc/os-release:
[2026-01-10 10:11:36] NAME="CentOS Linux"
[2026-01-10 10:11:36] VERSION="7 (Core)"
[2026-01-10 10:11:36] ID="centos"
[2026-01-10 10:11:36] ID_LIKE="rhel fedora"
[2026-01-10 10:11:36] VERSION_ID="7"
[2026-01-10 10:11:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:11:36] ANSI_COLOR="0;31"
[2026-01-10 10:11:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:11:36] HOME_URL="https://www.centos.org/"
[2026-01-10 10:11:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:11:36] 
[2026-01-10 10:11:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:11:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:11:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:11:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:11:36] 
[2026-01-10 10:11:36] 2026-01-10 15:10:35,311 | INFO     | ***************************************
[2026-01-10 10:11:36] 2026-01-10 15:10:35,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 10:11:36] 2026-01-10 15:10:35,958 | INFO     | sufficient remaining disk space (86266347520 B)
[2026-01-10 10:11:36] 2026-01-10 15:10:35,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:11:36] 2026-01-10 15:10:35,959 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:11:36] 2026-01-10 15:10:35,959 | INFO     | update_server=False
[2026-01-10 10:11:36] 2026-01-10 15:10:35,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:11:36] 2026-01-10 15:10:35,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:11:36] 2026-01-10 15:10:35,980 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 10:11:36] 2026-01-10 15:10:35,980 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 10:11:36] 2026-01-10 15:10:35,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:36] 2026-01-10 15:10:35,980 | INFO     | will abort loop
[2026-01-10 10:11:36] 2026-01-10 15:10:36,503 | INFO     | all data control threads have been joined
[2026-01-10 10:11:36] 2026-01-10 15:10:36,551 | INFO     | all job control threads have been joined
[2026-01-10 10:11:36] 2026-01-10 15:10:36,965 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:36,986 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,082 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,216 | INFO     | all payload control threads have been joined
[2026-01-10 10:11:36] 2026-01-10 15:10:37,359 | INFO     | [job] validate thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,438 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,498 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,508 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,511 | INFO     | [data] control thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,557 | INFO     | [job] control thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:11:36] 2026-01-10 15:10:37,857 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,866 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:37,967 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:38,222 | INFO     | [payload] control thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:38,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:11:36] 2026-01-10 15:10:38,390 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:39,351 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:10:41,814 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:11:36] 2026-01-10 15:11:04,421 | INFO     | 2110s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 10:11:36] 2026-01-10 15:11:05,844 | INFO     | PID=2898700 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:11:36] 2026-01-10 15:11:05,844 | INFO     | .. there are 9 such processes running
[2026-01-10 10:11:36] 2026-01-10 15:11:05,847 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:11:36] 2026-01-10 15:11:05,847 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:11:36] 2026-01-10 15:11:05,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:11:36] 2026-01-10 15:11:29,743 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:11:36] 2026-01-10 15:11:30,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688436664128)>', '<ExcThread(monitor, started 140688071051008)>']
[2026-01-10 10:11:36] 2026-01-10 15:11:30,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:11:36] 2026-01-10 15:11:30,997 | INFO     | [monitor] control thread has ended
[2026-01-10 10:11:36] 2026-01-10 15:11:35,250 | INFO     | all workflow threads have been joined
[2026-01-10 10:11:36] 2026-01-10 15:11:35,250 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:11:36] 2026-01-10 15:11:35,250 | INFO     | traces error code: 0
[2026-01-10 10:11:36] 2026-01-10 15:11:35,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:11:36] 2026-01-10 15:11:35,612 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:11:36] 2026-01-10 15:11:35,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:11:36] 2026-01-10 15:11:35,692 [wrapper] pilotpid: 2898700
[2026-01-10 10:11:36] 2026-01-10 15:11:35,732 [wrapper] Pilot exit status: 0
[2026-01-10 10:11:36] 2026-01-10 15:11:35,886 [wrapper] pandaids: 6965383919
[2026-01-10 10:11:36] 2026-01-10 15:11:35,951 [wrapper] cleanup supervisor_pilot 2972060 2898701
[2026-01-10 10:11:36] 2026-01-10 15:11:35,958 [wrapper] Test setup, not cleaning
[2026-01-10 10:11:36] 2026-01-10 15:11:35,960 [wrapper] apfmon messages muted
[2026-01-10 10:11:36] 2026-01-10 15:11:35,962 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:11:36] 2026-01-10 15:11:35,964 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:11:36]  *** Error codes and diagnostics ***
[2026-01-10 10:11:36]     "exeErrorCode": 0,
[2026-01-10 10:11:36]     "exeErrorDiag": "",
[2026-01-10 10:11:36]     "pilotErrorCode": 0,
[2026-01-10 10:11:36]     "pilotErrorDiag": "",
[2026-01-10 10:11:36]  *** Listing of results directory ***
[2026-01-10 10:11:36] total 429924
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:11:36] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:11:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:35 run_atlas
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:35 job.xml
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas 389443902 Jan 10 09:35 EVNT.47962006._000051.pool.root.1
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 09:35 input.tar.gz
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:35 start_atlas.sh
[2026-01-10 10:11:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:35 shared
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:35 boinc_lockfile
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 09:35 pandaJob.out
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas        57 Jan 10 09:35 setup.sh.local
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas    989556 Jan 10 09:35 agis_schedconf.cvmfs.json
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:35 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:11:36] drwx------. 5 boincer umatlas      4096 Jan 10 09:35 pilot3
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas       528 Jan 10 10:03 boinc_task_state.xml
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas      6903 Jan 10 10:04 init_data.xml
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas  43220239 Jan 10 10:09 HITS.47962010._002060.pool.root.1
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas      1033 Jan 10 10:09 memory_monitor_summary.json
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas   1490542 Jan 10 10:10 log.47962010._002060.job.log.tgz.1
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas      8530 Jan 10 10:10 heartbeat.json
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas        95 Jan 10 10:11 pilot_heartbeat.json
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:11 boinc_mmap_file
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas        26 Jan 10 10:11 wrapper_checkpoint.txt
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas      5124 Jan 10 10:11 pilotlog.txt
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas    344151 Jan 10 10:11 log.47962010._002060.job.log.1
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas       353 Jan 10 10:11 output.list
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:11 runtime_log
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas   1853440 Jan 10 10:11 result.tar.gz
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas       653 Jan 10 10:11 aeeMDmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcXhKDmY7UCKo.diag
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 10:11 runtime_log.err
[2026-01-10 10:11:36] -rw-r--r--. 1 boincer umatlas     15221 Jan 10 10:11 stderr.txt
[2026-01-10 10:11:36] HITS file was successfully produced:
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas 43220239 Jan 10 10:09 shared/HITS.pool.root.1
[2026-01-10 10:11:36]  *** Contents of shared directory: ***
[2026-01-10 10:11:36] total 424936
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas 389443902 Jan 10 09:35 ATLAS.root_0
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas    592614 Jan 10 09:35 input.tar.gz
[2026-01-10 10:11:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:35 start_atlas.sh
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas  43220239 Jan 10 10:09 HITS.pool.root.1
[2026-01-10 10:11:36] -rw-------. 1 boincer umatlas   1853440 Jan 10 10:11 result.tar.gz
10:11:58 (2894783): run_atlas exited; CPU time 11284.268021
10:11:58 (2894783): called boinc_finish(0)

</stderr_txt>
]]>

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