Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:13 (2102440): wrapper (7.7.26015): starting
08:18:13 (2102440): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 08:18:13] Arguments: --nthreads 9
[2026-01-10 08:18:13] Threads: 9
[2026-01-10 08:18:13] Checking for CVMFS
[2026-01-10 08:18:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:18:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:18:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:18:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:18:15] 2.13.3.0 11959 94901 342356 154981 2 76 28643395 32935937 15218 16776704 0 397784327 99.494 552446695 34168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:18:15] CVMFS is ok
[2026-01-10 08:18:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:18:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:18:15] Further information can be found at the LHC@home message board.
[2026-01-10 08:18:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:18:15] Checking for apptainer binary...
[2026-01-10 08:18:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:18:15] Running /usr/bin/apptainer --version
[2026-01-10 08:18:15] apptainer version 1.4.5-2.el9
[2026-01-10 08:18:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:18:16] c6-8-25-4.aglt2.org
[2026-01-10 08:18:16] apptainer works
[2026-01-10 08:18:16] Set ATHENA_PROC_NUMBER=9
[2026-01-10 08:18:16] Set ATHENA_CORE_NUMBER=9
[2026-01-10 08:18:16] Starting ATLAS job with PandaID=6965383920
[2026-01-10 08:18:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:09:33]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:09:33] 2026-01-10 15:08:25,602 | INFO     | extracted standard info from prmon json
[2026-01-10 10:09:33] 2026-01-10 15:08:25,603 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:09:33] 2026-01-10 15:08:25,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:09:33] 2026-01-10 15:08:25,605 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:09:33] 2026-01-10 15:08:25,606 | INFO     | sum of square deviations: 358826446.7619049
[2026-01-10 10:09:33] 2026-01-10 15:08:25,628 | INFO     | sum of deviations: -3445392326.8095284
[2026-01-10 10:09:33] 2026-01-10 15:08:25,629 | INFO     | mean x: 1768054465.6190476
[2026-01-10 10:09:33] 2026-01-10 15:08:25,651 | INFO     | mean y: 2207805.7047619047
[2026-01-10 10:09:33] 2026-01-10 15:08:25,651 | INFO     | intersect: 16978775013.046715
[2026-01-10 10:09:33] 2026-01-10 15:08:25,651 | INFO     | chi2: 12.57869216984671
[2026-01-10 10:09:33] 2026-01-10 15:08:25,652 | INFO     | sum of square deviations: 310034950.75
[2026-01-10 10:09:33] 2026-01-10 15:08:25,652 | INFO     | sum of deviations: 24245239143.499992
[2026-01-10 10:09:33] 2026-01-10 15:08:25,652 | INFO     | mean x: 1768054313.25
[2026-01-10 10:09:33] 2026-01-10 15:08:25,652 | INFO     | mean y: 2294511.06
[2026-01-10 10:09:33] 2026-01-10 15:08:25,653 | INFO     | intersect: -138262438351.29742
[2026-01-10 10:09:33] 2026-01-10 15:08:25,653 | INFO     | chi2: 8.872657344397131
[2026-01-10 10:09:33] 2026-01-10 15:08:25,653 | INFO     | current chi2=8.872657344397131 (change=29.46279927521862 %)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,653 | INFO     | sum of square deviations: 265876781.2210522
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | sum of deviations: 38353198737.46315
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | mean x: 1768054160.863158
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | mean y: 2342611.1894736844
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | intersect: -255042615804.35974
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | chi2: 7.456379325026157
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | current chi2=7.456379325026157 (change=15.962275611435842 %)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | right removable region: 94
[2026-01-10 10:09:33] 2026-01-10 15:08:25,654 | INFO     | sum of square deviations: 309867200.75
[2026-01-10 10:09:33] 2026-01-10 15:08:25,659 | INFO     | sum of deviations: -33951542796.5
[2026-01-10 10:09:33] 2026-01-10 15:08:25,659 | INFO     | mean x: 1768054618.25
[2026-01-10 10:09:33] 2026-01-10 15:08:25,659 | INFO     | mean y: 2302777.02
[2026-01-10 10:09:33] 2026-01-10 15:08:25,659 | INFO     | intersect: 193724587332.3799
[2026-01-10 10:09:33] 2026-01-10 15:08:25,660 | INFO     | chi2: 7.741478440485702
[2026-01-10 10:09:33] 2026-01-10 15:08:25,660 | INFO     | current chi2=7.741478440485702 (change=38.4556173570782 %)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,660 | INFO     | sum of square deviations: 265559200.94736895
[2026-01-10 10:09:33] 2026-01-10 15:08:25,660 | INFO     | sum of deviations: -52598391589.47369
[2026-01-10 10:09:33] 2026-01-10 15:08:25,660 | INFO     | mean x: 1768054770.8947368
[2026-01-10 10:09:33] 2026-01-10 15:08:25,661 | INFO     | mean y: 2366709.852631579
[2026-01-10 10:09:33] 2026-01-10 15:08:25,661 | INFO     | intersect: 350194854333.6934
[2026-01-10 10:09:33] 2026-01-10 15:08:25,661 | INFO     | chi2: 5.567191668141843
[2026-01-10 10:09:33] 2026-01-10 15:08:25,661 | INFO     | current chi2=5.567191668141843 (change=28.08619553821871 %)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,661 | INFO     | sum of square deviations: 225803188.90000018
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | sum of deviations: -55038856388.200005
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | mean x: 1768054923.3
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | mean y: 2375598.6
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | intersect: 430960509910.22125
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | chi2: 5.08958472139887
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | current chi2=5.08958472139887 (change=8.578956414884562 %)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,662 | INFO     | left removable region: 30
[2026-01-10 10:09:33] 2026-01-10 15:08:25,663 | INFO     | sum of square deviations: 81222897.4375
[2026-01-10 10:09:33] 2026-01-10 15:08:25,685 | INFO     | sum of deviations: -14259690719.25
[2026-01-10 10:09:33] 2026-01-10 15:08:25,685 | INFO     | mean x: 1768055045.59375
[2026-01-10 10:09:33] 2026-01-10 15:08:25,685 | INFO     | mean y: 2574425.375
[2026-01-10 10:09:33] 2026-01-10 15:08:25,685 | INFO     | intersect: 310406646678.2344
[2026-01-10 10:09:33] 2026-01-10 15:08:25,686 | INFO     | chi2: 0.4396164054188918
[2026-01-10 10:09:33] 2026-01-10 15:08:25,686 | INFO     | current memory leak: -175.56 B/s (using 64 data points, chi2=0.44)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,686 | INFO     | could have reported an average CPU frequency of 2662 MHz (7 samples)
[2026-01-10 10:09:33] 2026-01-10 15:08:25,686 | INFO     | ..............................
[2026-01-10 10:09:33] 2026-01-10 15:08:25,686 | INFO     | . Timing measurements:
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . get job = 0 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . initial setup = 5 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . payload setup = 44 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . stage-in = 0 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . payload execution = 6400 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . stage-out = 4 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | . log creation = 1 s
[2026-01-10 10:09:33] 2026-01-10 15:08:25,687 | INFO     | ..............................
[2026-01-10 10:09:33] 2026-01-10 15:08:26,032 | INFO     | 
[2026-01-10 10:09:33] 2026-01-10 15:08:26,032 | INFO     | job summary report
[2026-01-10 10:09:33] 2026-01-10 15:08:26,032 | INFO     | --------------------------------------------------
[2026-01-10 10:09:33] 2026-01-10 15:08:26,032 | INFO     | PanDA job id: 6965383920
[2026-01-10 10:09:33] 2026-01-10 15:08:26,032 | INFO     | task id: 47962010
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | errors: (none)
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | pilot state: finished 
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | transexitcode: 0
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | exeerrorcode: 0
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | exeerrordiag: 
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | exitcode: 0
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | exitmsg: OK
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | cpuconsumptiontime: 15695 s
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | nevents: 50
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | neventsw: 0
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | pid: 2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | pgrp: 2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | corecount: 9
[2026-01-10 10:09:33] 2026-01-10 15:08:26,033 | INFO     | event service: False
[2026-01-10 10:09:33] 2026-01-10 15:08:26,034 | INFO     | sizes: {0: 2284396, 1: 2284595, 12: 2284595, 23: 2284623, 31: 2284913, 35: 2284941, 6449: 2312778, 6450: 2312777, 6455: 2321883, 6486: 2322073}
[2026-01-10 10:09:33] 2026-01-10 15:08:26,034 | INFO     | --------------------------------------------------
[2026-01-10 10:09:33] 2026-01-10 15:08:26,034 | INFO     | 
[2026-01-10 10:09:33] 2026-01-10 15:08:26,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 10:09:33] 2026-01-10 15:08:26,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,138 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,138 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:09:33] 2026-01-10 15:08:26,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:09:33] 2026-01-10 15:08:26,140 | INFO     | job 6965383920 has completed (purged errors)
[2026-01-10 10:09:33] 2026-01-10 15:08:26,140 | INFO     | overall cleanup function is called
[2026-01-10 10:09:33] 2026-01-10 15:08:27,169 | INFO     | --- collectZombieJob: --- 10, [2140608]
[2026-01-10 10:09:33] 2026-01-10 15:08:27,169 | INFO     | zombie collector waiting for pid 2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:27,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:09:33] 2026-01-10 15:08:27,169 | INFO     | collected zombie processes
[2026-01-10 10:09:33] 2026-01-10 15:08:27,169 | INFO     | will attempt to kill all subprocesses of pid=2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:28,663 | INFO     | process IDs to be killed: [2140608] (in reverse order)
[2026-01-10 10:09:33] 2026-01-10 15:08:29,179 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:09:33] 2026-01-10 15:08:29,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:09:33] 2026-01-10 15:08:29,247 | INFO     | did not find any defunct processes belonging to 2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:29,341 | INFO     | did not find any defunct processes belonging to 2140608
[2026-01-10 10:09:33] 2026-01-10 15:08:29,341 | INFO     | ready for new job
[2026-01-10 10:09:33] 2026-01-10 15:08:29,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:09:33] 2026-01-10 15:08:29,343 | INFO     | ***************************************
[2026-01-10 10:09:33] 2026-01-10 15:08:29,343 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:09:33] 2026-01-10 15:08:29,343 | INFO     | ***************************************
[2026-01-10 10:09:33] 2026-01-10 15:08:29,343 | INFO     | 
[2026-01-10 10:09:33] 2026-01-10 15:08:29,391 | INFO     | architecture information:
[2026-01-10 10:09:33] 2026-01-10 15:08:29,405 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:09:33] 2026-01-10 15:08:29,534 | INFO     | cat /etc/os-release:
[2026-01-10 10:09:33] NAME="CentOS Linux"
[2026-01-10 10:09:33] VERSION="7 (Core)"
[2026-01-10 10:09:33] ID="centos"
[2026-01-10 10:09:33] ID_LIKE="rhel fedora"
[2026-01-10 10:09:33] VERSION_ID="7"
[2026-01-10 10:09:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:09:33] ANSI_COLOR="0;31"
[2026-01-10 10:09:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:09:33] HOME_URL="https://www.centos.org/"
[2026-01-10 10:09:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:09:33] 
[2026-01-10 10:09:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:09:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:09:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:09:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:09:33] 
[2026-01-10 10:09:33] 2026-01-10 15:08:29,534 | INFO     | ***************************************
[2026-01-10 10:09:33] 2026-01-10 15:08:30,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 10:09:33] 2026-01-10 15:08:30,132 | INFO     | sufficient remaining disk space (73962356736 B)
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | INFO     | update_server=False
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:09:33] 2026-01-10 15:08:30,133 | INFO     | aborting loop
[2026-01-10 10:09:33] 2026-01-10 15:08:30,307 | INFO     | all data control threads have been joined
[2026-01-10 10:09:33] 2026-01-10 15:08:30,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:09:33] 2026-01-10 15:08:30,510 | INFO     | all payload control threads have been joined
[2026-01-10 10:09:33] 2026-01-10 15:08:30,814 | INFO     | all job control threads have been joined
[2026-01-10 10:09:33] 2026-01-10 15:08:31,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:09:33] 2026-01-10 15:08:31,139 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,139 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,331 | INFO     | [data] control thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,516 | INFO     | [payload] control thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,804 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,829 | INFO     | [job] control thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,840 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,840 | INFO     | [job] validate thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:31,934 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,042 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,099 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,376 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,406 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,407 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,524 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:32,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:09:33] 2026-01-10 15:08:36,644 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:09:33] 2026-01-10 15:08:58,486 | INFO     | PID=2114590 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:09:33] 2026-01-10 15:08:58,486 | INFO     | .. there are 19 such processes running
[2026-01-10 10:09:33] 2026-01-10 15:08:58,487 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:09:33] 2026-01-10 15:08:58,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:09:33] 2026-01-10 15:08:58,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:09:33] 2026-01-10 15:09:25,486 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:09:33] 2026-01-10 15:09:27,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139707716163392)>', '<ExcThread(monitor, started 139707199502080)>']
[2026-01-10 10:09:33] 2026-01-10 15:09:27,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:09:33] 2026-01-10 15:09:27,692 | INFO     | [monitor] control thread has ended
[2026-01-10 10:09:33] 2026-01-10 15:09:32,106 | INFO     | all workflow threads have been joined
[2026-01-10 10:09:33] 2026-01-10 15:09:32,106 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:09:33] 2026-01-10 15:09:32,106 | INFO     | traces error code: 0
[2026-01-10 10:09:33] 2026-01-10 15:09:32,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:09:33] 2026-01-10 15:09:32,678 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:09:33] 2026-01-10 15:09:32,680 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:09:33] 2026-01-10 15:09:32,683 [wrapper] pilotpid: 2114590
[2026-01-10 10:09:33] 2026-01-10 15:09:32,685 [wrapper] Pilot exit status: 0
[2026-01-10 10:09:33] 2026-01-10 15:09:32,747 [wrapper] pandaids: 6965383920
[2026-01-10 10:09:33] 2026-01-10 15:09:32,955 [wrapper] cleanup supervisor_pilot 2554380 2114591
[2026-01-10 10:09:33] 2026-01-10 15:09:32,967 [wrapper] Test setup, not cleaning
[2026-01-10 10:09:33] 2026-01-10 15:09:32,994 [wrapper] apfmon messages muted
[2026-01-10 10:09:33] 2026-01-10 15:09:33,075 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:09:33] 2026-01-10 15:09:33,086 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:09:33]  *** Error codes and diagnostics ***
[2026-01-10 10:09:33]     "exeErrorCode": 0,
[2026-01-10 10:09:33]     "exeErrorDiag": "",
[2026-01-10 10:09:33]     "pilotErrorCode": 0,
[2026-01-10 10:09:33]     "pilotErrorDiag": "",
[2026-01-10 10:09:33]  *** Listing of results directory ***
[2026-01-10 10:09:33] total 429412
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:09:33] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:09:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:18 run_atlas
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:18 job.xml
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas 389443902 Jan 10 08:18 EVNT.47962006._000051.pool.root.1
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:18 start_atlas.sh
[2026-01-10 10:09:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:18 shared
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 08:18 input.tar.gz
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:18 boinc_lockfile
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 08:18 pandaJob.out
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas        57 Jan 10 08:18 setup.sh.local
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas    989556 Jan 10 08:19 agis_schedconf.cvmfs.json
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:19 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:09:33] drwx------. 5 boincer umatlas      4096 Jan 10 08:19 pilot3
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas       530 Jan 10 09:39 boinc_task_state.xml
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas      6876 Jan 10 10:00 init_data.xml
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas  41966349 Jan 10 10:07 HITS.47962010._002061.pool.root.1
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas      1040 Jan 10 10:07 memory_monitor_summary.json
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas   1327993 Jan 10 10:07 log.47962010._002061.job.log.tgz.1
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas      8577 Jan 10 10:08 heartbeat.json
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas        95 Jan 10 10:08 pilot_heartbeat.json
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:09 wrapper_checkpoint.txt
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:09 boinc_mmap_file
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas      4824 Jan 10 10:09 pilotlog.txt
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas    865529 Jan 10 10:09 log.47962010._002061.job.log.1
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas       353 Jan 10 10:09 output.list
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:09 runtime_log
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas   2211840 Jan 10 10:09 result.tar.gz
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas      9347 Jan 10 10:09 runtime_log.err
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas       653 Jan 10 10:09 CnfMDmNyny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdXhKDmohrHvm.diag
[2026-01-10 10:09:33] -rw-r--r--. 1 boincer umatlas     20952 Jan 10 10:09 stderr.txt
[2026-01-10 10:09:33] HITS file was successfully produced:
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas 41966349 Jan 10 10:07 shared/HITS.pool.root.1
[2026-01-10 10:09:33]  *** Contents of shared directory: ***
[2026-01-10 10:09:33] total 424064
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas 389443902 Jan 10 08:18 ATLAS.root_0
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:18 start_atlas.sh
[2026-01-10 10:09:33] -rw-r--r--. 2 boincer umatlas    592615 Jan 10 08:18 input.tar.gz
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas  41966349 Jan 10 10:07 HITS.pool.root.1
[2026-01-10 10:09:33] -rw-------. 1 boincer umatlas   2211840 Jan 10 10:09 result.tar.gz
10:09:35 (2102440): run_atlas exited; CPU time 15916.753470
10:09:35 (2102440): called boinc_finish(0)

</stderr_txt>
]]>

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