Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:30 (1055637): wrapper (7.7.26015): starting
08:21:30 (1055637): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:21:30] Arguments: --nthreads 8
[2026-01-10 08:21:30] Threads: 8
[2026-01-10 08:21:30] Checking for CVMFS
[2026-01-10 08:21:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:21:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:21:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:21:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:21:32] 2.13.3.0 10612 23190 426680 154981 0 114 21659542 32935936 25465 16776704 0 267063628 99.826 112366543 28359 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:21:32] CVMFS is ok
[2026-01-10 08:21:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:21:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:21:32] Further information can be found at the LHC@home message board.
[2026-01-10 08:21:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:21:32] Checking for apptainer binary...
[2026-01-10 08:21:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:21:32] Running /usr/bin/apptainer --version
[2026-01-10 08:21:32] apptainer version 1.4.5-2.el9
[2026-01-10 08:21:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:21:33] lc-10-10.aglt2.org
[2026-01-10 08:21:33] apptainer works
[2026-01-10 08:21:33] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:21:33] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:21:33] Starting ATLAS job with PandaID=6965383857
[2026-01-10 08:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:35:09]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:35:09] 2026-01-10 15:34:22,801 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 10:35:09] 2026-01-10 15:34:22,827 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2789.2442291666666
[2026-01-10 10:35:09] 2026-01-10 15:34:22,916 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965383857/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,917 | INFO     | extracted standard info from prmon json
[2026-01-10 10:35:09] 2026-01-10 15:34:22,917 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:35:09] 2026-01-10 15:34:22,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:35:09] 2026-01-10 15:34:22,935 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:35:09] 2026-01-10 15:34:22,935 | INFO     | sum of square deviations: 635233382.850392
[2026-01-10 10:35:09] 2026-01-10 15:34:22,936 | INFO     | sum of deviations: 10664492829.913395
[2026-01-10 10:35:09] 2026-01-10 15:34:22,949 | INFO     | mean x: 1768055362.8425198
[2026-01-10 10:35:09] 2026-01-10 15:34:22,949 | INFO     | mean y: 2311205.6456692913
[2026-01-10 10:35:09] 2026-01-10 15:34:22,949 | INFO     | intersect: -29680344411.91142
[2026-01-10 10:35:09] 2026-01-10 15:34:22,950 | INFO     | chi2: 8.934154271277086
[2026-01-10 10:35:09] 2026-01-10 15:34:22,950 | INFO     | sum of square deviations: 563239768.2950817
[2026-01-10 10:35:09] 2026-01-10 15:34:22,950 | INFO     | sum of deviations: 47311386836.96718
[2026-01-10 10:35:09] 2026-01-10 15:34:22,950 | INFO     | mean x: 1768055210.4590163
[2026-01-10 10:35:09] 2026-01-10 15:34:22,951 | INFO     | mean y: 2388970.893442623
[2026-01-10 10:35:09] 2026-01-10 15:34:22,951 | INFO     | intersect: -148511882782.93997
[2026-01-10 10:35:09] 2026-01-10 15:34:22,951 | INFO     | chi2: 4.994434887417486
[2026-01-10 10:35:09] 2026-01-10 15:34:22,951 | INFO     | current chi2=4.994434887417486 (change=44.09728402077883 %)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,951 | INFO     | sum of square deviations: 496905923.4529918
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | sum of deviations: 59828158257.62393
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | mean x: 1768055058.068376
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | mean y: 2417742.547008547
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | intersect: -212873848829.69925
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | chi2: 4.286131821132758
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | current chi2=4.286131821132758 (change=14.181846039662277 %)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,952 | INFO     | right removable region: 116
[2026-01-10 10:35:09] 2026-01-10 15:34:22,953 | INFO     | sum of square deviations: 563019558.2950817
[2026-01-10 10:35:09] 2026-01-10 15:34:22,978 | INFO     | sum of deviations: -23485840764.540985
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | mean x: 1768055515.4590163
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | mean y: 2383121.4918032787
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | intersect: 73755185643.45284
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | chi2: 5.730968491946212
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | current chi2=5.730968491946212 (change=35.85326245852924 %)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,979 | INFO     | sum of square deviations: 496501858.5811954
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | sum of deviations: -39092869206.205124
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | mean x: 1768055668.059829
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | mean y: 2418589.7435897435
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | intersect: 139213113950.00928
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | chi2: 4.8923113411979715
[2026-01-10 10:35:09] 2026-01-10 15:34:22,980 | INFO     | current chi2=4.8923113411979715 (change=14.633777029603523 %)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | left removable region: 20
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | sum of square deviations: 274402264.15625
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | sum of deviations: 5411026031.34375
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | mean x: 1768055637.90625
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | mean y: 2576619.59375
[2026-01-10 10:35:09] 2026-01-10 15:34:22,981 | INFO     | intersect: -34862278125.654144
[2026-01-10 10:35:09] 2026-01-10 15:34:22,982 | INFO     | chi2: 0.17263418214446546
[2026-01-10 10:35:09] 2026-01-10 15:34:22,989 | INFO     | current memory leak: 19.72 B/s (using 96 data points, chi2=0.17)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | could have reported an average CPU frequency of 2741 MHz (8 samples)
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | ..............................
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . Timing measurements:
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . get job = 0 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . initial setup = 5 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . payload setup = 50 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . stage-in = 0 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . payload execution = 7740 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . stage-out = 4 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | . log creation = 2 s
[2026-01-10 10:35:09] 2026-01-10 15:34:22,990 | INFO     | ..............................
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | 
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | job summary report
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | --------------------------------------------------
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | PanDA job id: 6965383857
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | task id: 47962010
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | errors: (none)
[2026-01-10 10:35:09] 2026-01-10 15:34:23,647 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | pilot state: finished 
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | transexitcode: 0
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | exeerrorcode: 0
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | exeerrordiag: 
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | exitcode: 0
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | exitmsg: OK
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | cpuconsumptiontime: 15758 s
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | nevents: 50
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | neventsw: 0
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | pid: 1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | pgrp: 1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | corecount: 8
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | event service: False
[2026-01-10 10:35:09] 2026-01-10 15:34:23,648 | INFO     | sizes: {0: 2284342, 1: 2284426, 2: 2284625, 13: 2284625, 24: 2284681, 36: 2285127, 47: 2285127, 7796: 2313252, 7797: 2313251, 7802: 2322357, 7828: 2322547}
[2026-01-10 10:35:09] 2026-01-10 15:34:23,649 | INFO     | --------------------------------------------------
[2026-01-10 10:35:09] 2026-01-10 15:34:23,649 | INFO     | 
[2026-01-10 10:35:09] 2026-01-10 15:34:23,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 10:35:09] 2026-01-10 15:34:23,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:35:09] 2026-01-10 15:34:23,840 | INFO     | job 6965383857 has completed (purged errors)
[2026-01-10 10:35:09] 2026-01-10 15:34:23,841 | INFO     | overall cleanup function is called
[2026-01-10 10:35:09] 2026-01-10 15:34:24,901 | INFO     | --- collectZombieJob: --- 10, [1139206]
[2026-01-10 10:35:09] 2026-01-10 15:34:24,905 | INFO     | zombie collector waiting for pid 1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:24,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:35:09] 2026-01-10 15:34:24,905 | INFO     | collected zombie processes
[2026-01-10 10:35:09] 2026-01-10 15:34:24,906 | INFO     | will attempt to kill all subprocesses of pid=1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:24,994 | INFO     | PID=1080792 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:35:09] 2026-01-10 15:34:24,994 | INFO     | .. there are 43 such processes running
[2026-01-10 10:35:09] 2026-01-10 15:34:26,860 | INFO     | process IDs to be killed: [1139206] (in reverse order)
[2026-01-10 10:35:09] 2026-01-10 15:34:27,427 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:35:09] 2026-01-10 15:34:27,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:35:09] 2026-01-10 15:34:27,573 | INFO     | did not find any defunct processes belonging to 1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:27,714 | INFO     | did not find any defunct processes belonging to 1139206
[2026-01-10 10:35:09] 2026-01-10 15:34:27,714 | INFO     | ready for new job
[2026-01-10 10:35:09] 2026-01-10 15:34:27,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:35:09] 2026-01-10 15:34:27,728 | INFO     | ***************************************
[2026-01-10 10:35:09] 2026-01-10 15:34:27,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:35:09] 2026-01-10 15:34:27,728 | INFO     | ***************************************
[2026-01-10 10:35:09] 2026-01-10 15:34:27,728 | INFO     | 
[2026-01-10 10:35:09] 2026-01-10 15:34:27,734 | INFO     | architecture information:
[2026-01-10 10:35:09] 2026-01-10 15:34:27,734 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:35:09] 2026-01-10 15:34:27,859 | INFO     | cat /etc/os-release:
[2026-01-10 10:35:09] NAME="CentOS Linux"
[2026-01-10 10:35:09] VERSION="7 (Core)"
[2026-01-10 10:35:09] ID="centos"
[2026-01-10 10:35:09] ID_LIKE="rhel fedora"
[2026-01-10 10:35:09] VERSION_ID="7"
[2026-01-10 10:35:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:35:09] ANSI_COLOR="0;31"
[2026-01-10 10:35:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:35:09] HOME_URL="https://www.centos.org/"
[2026-01-10 10:35:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:35:09] 
[2026-01-10 10:35:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:35:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:35:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:35:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:35:09] 
[2026-01-10 10:35:09] 2026-01-10 15:34:27,859 | INFO     | ***************************************
[2026-01-10 10:35:09] 2026-01-10 15:34:28,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 10:35:09] 2026-01-10 15:34:28,463 | INFO     | sufficient remaining disk space (93259300864 B)
[2026-01-10 10:35:09] 2026-01-10 15:34:28,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:35:09] 2026-01-10 15:34:28,464 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:35:09] 2026-01-10 15:34:28,464 | INFO     | update_server=False
[2026-01-10 10:35:09] 2026-01-10 15:34:28,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:35:09] 2026-01-10 15:34:28,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:35:09] 2026-01-10 15:34:28,591 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 10:35:09] 2026-01-10 15:34:28,591 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 10:35:09] 2026-01-10 15:34:28,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:35:09] 2026-01-10 15:34:28,591 | INFO     | will abort loop
[2026-01-10 10:35:09] 2026-01-10 15:34:28,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:35:09] 2026-01-10 15:34:28,918 | INFO     | all payload control threads have been joined
[2026-01-10 10:35:09] 2026-01-10 15:34:28,918 | INFO     | all job control threads have been joined
[2026-01-10 10:35:09] 2026-01-10 15:34:29,209 | INFO     | all data control threads have been joined
[2026-01-10 10:35:09] 2026-01-10 15:34:29,470 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:29,596 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:29,647 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:29,668 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:29,924 | INFO     | [job] control thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:29,928 | INFO     | [payload] control thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,218 | INFO     | [data] control thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,222 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,223 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,280 | INFO     | [job] validate thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,453 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,472 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,540 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,591 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,708 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:30,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:35:09] 2026-01-10 15:34:34,814 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:35:09] 2026-01-10 15:34:52,527 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:35:09] 2026-01-10 15:34:53,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499445921600)>', '<ExcThread(monitor, started 140499092489984)>']
[2026-01-10 10:35:09] 2026-01-10 15:34:58,231 | INFO     | all workflow threads have been joined
[2026-01-10 10:35:09] 2026-01-10 15:34:58,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:35:09] 2026-01-10 15:34:58,231 | INFO     | traces error code: 0
[2026-01-10 10:35:09] 2026-01-10 15:34:58,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:35:09] 2026-01-10 15:34:59,510 | INFO     | PID=1080792 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:35:09] 2026-01-10 15:34:59,510 | INFO     | .. there are 43 such processes running
[2026-01-10 10:35:09] 2026-01-10 15:34:59,511 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:35:09] 2026-01-10 15:34:59,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:35:09] 2026-01-10 15:34:59,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:35:09] 2026-01-10 15:34:59,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:35:09] 2026-01-10 15:34:59,511 | INFO     | [monitor] control thread has ended
[2026-01-10 10:35:09] 2026-01-10 15:35:00,863 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:35:09] 2026-01-10 15:35:00,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:35:09] 2026-01-10 15:35:00,947 [wrapper] pilotpid: 1080792
[2026-01-10 10:35:09] 2026-01-10 15:35:00,976 [wrapper] Pilot exit status: 0
[2026-01-10 10:35:09] 2026-01-10 15:35:01,078 [wrapper] pandaids: 6965383857
[2026-01-10 10:35:09] 2026-01-10 15:35:01,654 [wrapper] cleanup supervisor_pilot 2893193 1080793
[2026-01-10 10:35:09] 2026-01-10 15:35:01,682 [wrapper] Test setup, not cleaning
[2026-01-10 10:35:09] 2026-01-10 15:35:01,697 [wrapper] apfmon messages muted
[2026-01-10 10:35:09] 2026-01-10 15:35:01,735 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:35:09] 2026-01-10 15:35:01,758 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:35:09]  *** Error codes and diagnostics ***
[2026-01-10 10:35:09]     "exeErrorCode": 0,
[2026-01-10 10:35:09]     "exeErrorDiag": "",
[2026-01-10 10:35:09]     "pilotErrorCode": 0,
[2026-01-10 10:35:09]     "pilotErrorDiag": "",
[2026-01-10 10:35:09]  *** Listing of results directory ***
[2026-01-10 10:35:09] total 435428
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 10:35:09] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:14 pilot3.tar.gz
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:35:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:21 run_atlas
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:21 job.xml
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas 391066744 Jan 10 08:21 EVNT.47962006._000045.pool.root.1
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 10:35:09] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:21 shared
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 08:21 input.tar.gz
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:21 boinc_lockfile
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:21 pandaJob.out
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas        57 Jan 10 08:21 setup.sh.local
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas    989556 Jan 10 08:22 agis_schedconf.cvmfs.json
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:35:09] drwx------. 5 boincer umatlas      4096 Jan 10 08:22 pilot3
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas       530 Jan 10 10:17 boinc_task_state.xml
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas      6862 Jan 10 10:30 init_data.xml
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas  46531199 Jan 10 10:33 HITS.47962010._001998.pool.root.1
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas      1046 Jan 10 10:33 memory_monitor_summary.json
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas   1241862 Jan 10 10:33 log.47962010._001998.job.log.tgz.1
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas      8580 Jan 10 10:34 heartbeat.json
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas       823 Jan 10 10:34 pilotlog.txt
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas        95 Jan 10 10:34 pilot_heartbeat.json
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas    936735 Jan 10 10:35 log.47962010._001998.job.log.1
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas       353 Jan 10 10:35 output.list
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:35 runtime_log
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas   2201600 Jan 10 10:35 result.tar.gz
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas      9342 Jan 10 10:35 runtime_log.err
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas       653 Jan 10 10:35 jZENDmDyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0mmKDmfXJGSn.diag
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:35 boinc_mmap_file
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:35 wrapper_checkpoint.txt
[2026-01-10 10:35:09] -rw-r--r--. 1 boincer umatlas     21311 Jan 10 10:35 stderr.txt
[2026-01-10 10:35:09] HITS file was successfully produced:
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas 46531199 Jan 10 10:33 shared/HITS.pool.root.1
[2026-01-10 10:35:09]  *** Contents of shared directory: ***
[2026-01-10 10:35:09] total 430100
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas 391066744 Jan 10 08:21 ATLAS.root_0
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:21 start_atlas.sh
[2026-01-10 10:35:09] -rw-r--r--. 2 boincer umatlas    592611 Jan 10 08:21 input.tar.gz
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas  46531199 Jan 10 10:33 HITS.pool.root.1
[2026-01-10 10:35:09] -rw-------. 1 boincer umatlas   2201600 Jan 10 10:35 result.tar.gz
10:35:32 (1055637): run_atlas exited; CPU time 16111.955327
10:35:32 (1055637): called boinc_finish(0)

</stderr_txt>
]]>

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