Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:15:58 (1041675): wrapper (7.7.26015): starting
08:15:58 (1041675): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:15:58] Arguments: --nthreads 10
[2026-01-10 08:15:58] Threads: 10
[2026-01-10 08:15:58] Checking for CVMFS
[2026-01-10 08:15:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:15:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:15:59] 2.13.3.0 9734 22563 184396 154980 0 240 37681828 39288833 5008 16776704 0 11572990 99.359 16556876 36423 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:15:59] CVMFS is ok
[2026-01-10 08:15:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:15:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:15:59] Further information can be found at the LHC@home message board.
[2026-01-10 08:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:15:59] Checking for apptainer binary...
[2026-01-10 08:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:15:59] Running /usr/bin/apptainer --version
[2026-01-10 08:16:00] apptainer version 1.4.5-2.el9
[2026-01-10 08:16:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:16:01] c-210-4.aglt2.org
[2026-01-10 08:16:01] apptainer works
[2026-01-10 08:16:01] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:16:01] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:16:01] Starting ATLAS job with PandaID=6965383879
[2026-01-10 08:16:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:53:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:53:06] 2026-01-10 15:52:33,112 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 10:53:06] 2026-01-10 15:52:33,120 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1592749999995
[2026-01-10 10:53:06] 2026-01-10 15:52:33,127 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383879/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,127 | INFO     | extracted standard info from prmon json
[2026-01-10 10:53:06] 2026-01-10 15:52:33,128 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:53:06] 2026-01-10 15:52:33,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:53:06] 2026-01-10 15:52:33,132 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:53:06] 2026-01-10 15:52:33,132 | INFO     | sum of square deviations: 1109975255.8954291
[2026-01-10 10:53:06] 2026-01-10 15:52:33,133 | INFO     | sum of deviations: 17787401007.1307
[2026-01-10 10:53:06] 2026-01-10 15:52:33,133 | INFO     | mean x: 1768055699.9738562
[2026-01-10 10:53:06] 2026-01-10 15:52:33,133 | INFO     | mean y: 2755322.0326797385
[2026-01-10 10:53:06] 2026-01-10 15:52:33,133 | INFO     | intersect: -28330412981.802883
[2026-01-10 10:53:06] 2026-01-10 15:52:33,134 | INFO     | chi2: 4.424704088669074
[2026-01-10 10:53:06] 2026-01-10 15:52:33,134 | INFO     | sum of square deviations: 1004847118.0202714
[2026-01-10 10:53:06] 2026-01-10 15:52:33,135 | INFO     | sum of deviations: 51092945265.10135
[2026-01-10 10:53:06] 2026-01-10 15:52:33,135 | INFO     | mean x: 1768055547.641892
[2026-01-10 10:53:06] 2026-01-10 15:52:33,135 | INFO     | mean y: 2803330.2094594594
[2026-01-10 10:53:06] 2026-01-10 15:52:33,135 | INFO     | intersect: -89896608929.93854
[2026-01-10 10:53:06] 2026-01-10 15:52:33,135 | INFO     | chi2: 2.725593207279597
[2026-01-10 10:53:06] 2026-01-10 15:52:33,136 | INFO     | current chi2=2.725593207279597 (change=38.40055396564519 %)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,136 | INFO     | sum of square deviations: 906531147.9020964
[2026-01-10 10:53:06] 2026-01-10 15:52:33,137 | INFO     | sum of deviations: 60521173915.33569
[2026-01-10 10:53:06] 2026-01-10 15:52:33,137 | INFO     | mean x: 1768055395.2657342
[2026-01-10 10:53:06] 2026-01-10 15:52:33,137 | INFO     | mean y: 2817753.5174825173
[2026-01-10 10:53:06] 2026-01-10 15:52:33,137 | INFO     | intersect: -118034812080.22475
[2026-01-10 10:53:06] 2026-01-10 15:52:33,137 | INFO     | chi2: 2.4653170944849268
[2026-01-10 10:53:06] 2026-01-10 15:52:33,138 | INFO     | current chi2=2.4653170944849268 (change=9.549338180749677 %)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,138 | INFO     | right removable region: 142
[2026-01-10 10:53:06] 2026-01-10 15:52:33,138 | INFO     | sum of square deviations: 1004382908.0202714
[2026-01-10 10:53:06] 2026-01-10 15:52:33,139 | INFO     | sum of deviations: -23766620118.621613
[2026-01-10 10:53:06] 2026-01-10 15:52:33,139 | INFO     | mean x: 1768055852.641892
[2026-01-10 10:53:06] 2026-01-10 15:52:33,139 | INFO     | mean y: 2815086.6486486485
[2026-01-10 10:53:06] 2026-01-10 15:52:33,139 | INFO     | intersect: 41840157660.58
[2026-01-10 10:53:06] 2026-01-10 15:52:33,139 | INFO     | chi2: 2.0596567371815917
[2026-01-10 10:53:06] 2026-01-10 15:52:33,140 | INFO     | current chi2=2.0596567371815917 (change=53.45097218012776 %)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,140 | INFO     | sum of square deviations: 905989996.1538489
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | sum of deviations: -27961830022.999992
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | mean x: 1768056005.0769231
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | mean y: 2821572.8181818184
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | intersect: 54570842958.244286
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | chi2: 2.0200789998672617
[2026-01-10 10:53:06] 2026-01-10 15:52:33,141 | INFO     | current chi2=2.0200789998672617 (change=1.9215695800110695 %)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,142 | INFO     | left removable region: 20
[2026-01-10 10:53:06] 2026-01-10 15:52:33,142 | INFO     | sum of square deviations: 562812926.0409827
[2026-01-10 10:53:06] 2026-01-10 15:52:33,142 | INFO     | sum of deviations: 7372618803.385249
[2026-01-10 10:53:06] 2026-01-10 15:52:33,143 | INFO     | mean x: 1768055974.8442624
[2026-01-10 10:53:06] 2026-01-10 15:52:33,143 | INFO     | mean y: 2911480.3360655736
[2026-01-10 10:53:06] 2026-01-10 15:52:33,143 | INFO     | intersect: -23157897595.72494
[2026-01-10 10:53:06] 2026-01-10 15:52:33,143 | INFO     | chi2: 0.055418017708444546
[2026-01-10 10:53:06] 2026-01-10 15:52:33,143 | INFO     | current memory leak: 13.10 B/s (using 122 data points, chi2=0.06)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | could have reported an average CPU frequency of 2602 MHz (9 samples)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | ..............................
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . Timing measurements:
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . get job = 0 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . initial setup = 4 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . payload setup = 9 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . stage-in = 0 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,144 | INFO     | . payload execution = 9307 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,145 | INFO     | . stage-out = 0 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,145 | INFO     | . log creation = 0 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,145 | INFO     | ..............................
[2026-01-10 10:53:06] 2026-01-10 15:52:33,528 | INFO     | PID=1045453 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,528 | INFO     | .. there are 6 such processes running
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | job summary report
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | --------------------------------------------------
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | PanDA job id: 6965383879
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | task id: 47962010
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | errors: (none)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,616 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | pilot state: finished 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | transexitcode: 0
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | exeerrorcode: 0
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | exeerrordiag: 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | exitcode: 0
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | exitmsg: OK
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | cpuconsumptiontime: 19387 s
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | nevents: 50
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | neventsw: 0
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | pid: 1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:33,617 | INFO     | pgrp: 1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | corecount: 10
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | event service: False
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | sizes: {0: 2284569, 1: 2284597, 11: 2284859, 22: 2284887, 9320: 2313948, 9323: 2323126, 9327: 2323380}
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | --------------------------------------------------
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | 
[2026-01-10 10:53:06] 2026-01-10 15:52:33,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 10:53:06] 2026-01-10 15:52:33,637 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,637 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,637 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,637 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | job 6965383879 has completed (purged errors)
[2026-01-10 10:53:06] 2026-01-10 15:52:33,639 | INFO     | overall cleanup function is called
[2026-01-10 10:53:06] 2026-01-10 15:52:34,655 | INFO     | --- collectZombieJob: --- 10, [1053552]
[2026-01-10 10:53:06] 2026-01-10 15:52:34,656 | INFO     | zombie collector waiting for pid 1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:34,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:53:06] 2026-01-10 15:52:34,656 | INFO     | collected zombie processes
[2026-01-10 10:53:06] 2026-01-10 15:52:34,656 | INFO     | will attempt to kill all subprocesses of pid=1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:34,885 | INFO     | process IDs to be killed: [1053552] (in reverse order)
[2026-01-10 10:53:06] 2026-01-10 15:52:34,952 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:53:06] 2026-01-10 15:52:34,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:53:06] 2026-01-10 15:52:34,959 | INFO     | did not find any defunct processes belonging to 1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:34,966 | INFO     | did not find any defunct processes belonging to 1053552
[2026-01-10 10:53:06] 2026-01-10 15:52:34,966 | INFO     | ready for new job
[2026-01-10 10:53:06] 2026-01-10 15:52:34,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:53:06] 2026-01-10 15:52:34,968 | INFO     | ***************************************
[2026-01-10 10:53:06] 2026-01-10 15:52:34,968 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:53:06] 2026-01-10 15:52:34,968 | INFO     | ***************************************
[2026-01-10 10:53:06] 2026-01-10 15:52:34,969 | INFO     | 
[2026-01-10 10:53:06] 2026-01-10 15:52:34,971 | INFO     | architecture information:
[2026-01-10 10:53:06] 2026-01-10 15:52:34,971 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:53:06] 2026-01-10 15:52:34,986 | INFO     | cat /etc/os-release:
[2026-01-10 10:53:06] NAME="CentOS Linux"
[2026-01-10 10:53:06] VERSION="7 (Core)"
[2026-01-10 10:53:06] ID="centos"
[2026-01-10 10:53:06] ID_LIKE="rhel fedora"
[2026-01-10 10:53:06] VERSION_ID="7"
[2026-01-10 10:53:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:53:06] ANSI_COLOR="0;31"
[2026-01-10 10:53:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:53:06] HOME_URL="https://www.centos.org/"
[2026-01-10 10:53:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:53:06] 
[2026-01-10 10:53:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:53:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:53:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:53:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:53:06] 
[2026-01-10 10:53:06] 2026-01-10 15:52:34,986 | INFO     | ***************************************
[2026-01-10 10:53:06] 2026-01-10 15:52:35,488 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 10:53:06] 2026-01-10 15:52:35,503 | INFO     | sufficient remaining disk space (53621030912 B)
[2026-01-10 10:53:06] 2026-01-10 15:52:35,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:53:06] 2026-01-10 15:52:35,503 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:53:06] 2026-01-10 15:52:35,503 | INFO     | update_server=False
[2026-01-10 10:53:06] 2026-01-10 15:52:35,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:53:06] 2026-01-10 15:52:35,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:53:06] 2026-01-10 15:52:35,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:53:06] 2026-01-10 15:52:35,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 10:53:06] 2026-01-10 15:52:35,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 10:53:06] 2026-01-10 15:52:35,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:53:06] 2026-01-10 15:52:35,810 | INFO     | will abort loop
[2026-01-10 10:53:06] 2026-01-10 15:52:35,980 | INFO     | all payload control threads have been joined
[2026-01-10 10:53:06] 2026-01-10 15:52:36,095 | INFO     | all job control threads have been joined
[2026-01-10 10:53:06] 2026-01-10 15:52:36,504 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:36,546 | INFO     | all data control threads have been joined
[2026-01-10 10:53:06] 2026-01-10 15:52:36,816 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:36,981 | INFO     | [payload] control thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:36,982 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,100 | INFO     | [job] control thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,122 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,122 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,181 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,510 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,551 | INFO     | [data] control thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,567 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,754 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,756 | INFO     | [job] validate thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:37,916 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:38,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:53:06] 2026-01-10 15:52:38,831 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:53:06] 2026-01-10 15:52:39,261 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:39,566 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:53:06] 2026-01-10 15:52:40,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148577556288)>', '<ExcThread(monitor, started 140148230563584)>']
[2026-01-10 10:53:06] 2026-01-10 15:52:45,445 | INFO     | all workflow threads have been joined
[2026-01-10 10:53:06] 2026-01-10 15:52:45,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:53:06] 2026-01-10 15:52:45,446 | INFO     | traces error code: 0
[2026-01-10 10:53:06] 2026-01-10 15:52:45,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:53:06] 2026-01-10 15:53:05,855 | INFO     | PID=1045453 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:53:06] 2026-01-10 15:53:05,855 | INFO     | .. there are 6 such processes running
[2026-01-10 10:53:06] 2026-01-10 15:53:05,855 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:53:06] 2026-01-10 15:53:05,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:53:06] 2026-01-10 15:53:05,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:53:06] 2026-01-10 15:53:05,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:53:06] 2026-01-10 15:53:05,856 | INFO     | [monitor] control thread has ended
[2026-01-10 10:53:06] 2026-01-10 15:53:05,972 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:53:06] 2026-01-10 15:53:05,975 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:53:06] 2026-01-10 15:53:05,977 [wrapper] pilotpid: 1045453
[2026-01-10 10:53:06] 2026-01-10 15:53:05,980 [wrapper] Pilot exit status: 0
[2026-01-10 10:53:06] 2026-01-10 15:53:05,995 [wrapper] pandaids: 6965383879
[2026-01-10 10:53:06] 2026-01-10 15:53:06,036 [wrapper] cleanup supervisor_pilot 1245288 1045454
[2026-01-10 10:53:06] 2026-01-10 15:53:06,039 [wrapper] Test setup, not cleaning
[2026-01-10 10:53:06] 2026-01-10 15:53:06,042 [wrapper] apfmon messages muted
[2026-01-10 10:53:06] 2026-01-10 15:53:06,044 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:53:06] 2026-01-10 15:53:06,047 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:53:06]  *** Error codes and diagnostics ***
[2026-01-10 10:53:06]     "exeErrorCode": 0,
[2026-01-10 10:53:06]     "exeErrorDiag": "",
[2026-01-10 10:53:06]     "pilotErrorCode": 0,
[2026-01-10 10:53:06]     "pilotErrorDiag": "",
[2026-01-10 10:53:06]  *** Listing of results directory ***
[2026-01-10 10:53:06] total 438596
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 10:53:06] -rwx------. 1 boincer umatlas     36322 Jan 10 08:14 runpilot2-wrapper.sh
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:53:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:15 run_atlas
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:15 job.xml
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas 392805046 Jan 10 08:15 EVNT.47962006._000046.pool.root.1
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:15 start_atlas.sh
[2026-01-10 10:53:06] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:15 shared
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas    610735 Jan 10 08:15 input.tar.gz
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:15 boinc_lockfile
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:16 pandaJob.out
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas        57 Jan 10 08:16 setup.sh.local
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas    989556 Jan 10 08:16 agis_schedconf.cvmfs.json
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:16 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:53:06] drwx------. 7 boincer umatlas      4096 Jan 10 08:16 pilot3
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas       530 Jan 10 10:36 boinc_task_state.xml
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas      6659 Jan 10 10:48 init_data.xml
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas        95 Jan 10 10:52 pilot_heartbeat.json
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas  46966551 Jan 10 10:52 HITS.47962010._002020.pool.root.1
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas      1033 Jan 10 10:52 memory_monitor_summary.json
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas   1465558 Jan 10 10:52 log.47962010._002020.job.log.tgz.1
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas      8560 Jan 10 10:52 heartbeat.json
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:53 boinc_mmap_file
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:53 wrapper_checkpoint.txt
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas       822 Jan 10 10:53 pilotlog.txt
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas   1234371 Jan 10 10:53 log.47962010._002020.job.log.1
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas       353 Jan 10 10:53 output.list
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:53 runtime_log
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas   2723840 Jan 10 10:53 result.tar.gz
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas      9339 Jan 10 10:53 runtime_log.err
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas       654 Jan 10 10:53 R6xNDmDyny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLnmKDmn1wNZm.diag
[2026-01-10 10:53:06] -rw-r--r--. 1 boincer umatlas     21271 Jan 10 10:53 stderr.txt
[2026-01-10 10:53:06] HITS file was successfully produced:
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas 46966551 Jan 10 10:52 shared/HITS.pool.root.1
[2026-01-10 10:53:06]  *** Contents of shared directory: ***
[2026-01-10 10:53:06] total 432744
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas 392805046 Jan 10 08:15 ATLAS.root_0
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:15 start_atlas.sh
[2026-01-10 10:53:06] -rw-r--r--. 2 boincer umatlas    610735 Jan 10 08:15 input.tar.gz
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas  46966551 Jan 10 10:52 HITS.pool.root.1
[2026-01-10 10:53:06] -rw-------. 1 boincer umatlas   2723840 Jan 10 10:53 result.tar.gz
10:53:07 (1041675): run_atlas exited; CPU time 19504.816068
10:53:07 (1041675): called boinc_finish(0)

</stderr_txt>
]]>

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