Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:22 (21680): wrapper (7.7.26015): starting
08:14:22 (21680): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:14:22] Arguments: --nthreads 8
[2026-01-10 08:14:22] Threads: 8
[2026-01-10 08:14:22] Checking for CVMFS
[2026-01-10 08:14:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:14:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:14:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:14:22] 2.11.2.0 16446 182510 135364 154980 0 56 16941269 18432001 976 130560 0 123403001 99.980 7004583 32419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:14:22] CVMFS is ok
[2026-01-10 08:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:14:22] Further information can be found at the LHC@home message board.
[2026-01-10 08:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:14:22] Checking for apptainer binary...
[2026-01-10 08:14:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:14:22] Running /usr/bin/apptainer --version
[2026-01-10 08:14:22] apptainer version 1.3.2-1.el7
[2026-01-10 08:14:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:14:23] c-206-26.aglt2.org
[2026-01-10 08:14:23] apptainer works
[2026-01-10 08:14:23] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:14:23] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:14:23] Starting ATLAS job with PandaID=6965382695
[2026-01-10 08:14:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:32:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:32:04] 2026-01-10 17:31:21,520 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 12:32:04] 2026-01-10 17:31:21,526 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1673.625
[2026-01-10 12:32:04] 2026-01-10 17:31:21,527 | INFO     | time since job start (15408s) is within the limit (349056.0s)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,530 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965382695/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,531 | INFO     | extracted standard info from prmon json
[2026-01-10 12:32:04] 2026-01-10 17:31:21,531 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:32:04] 2026-01-10 17:31:21,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:32:04] 2026-01-10 17:31:21,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:32:04] 2026-01-10 17:31:21,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:32:04] 2026-01-10 17:31:21,536 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:32:04] 2026-01-10 17:31:21,536 | INFO     | sum of square deviations: 5021496942.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,538 | INFO     | sum of deviations: -12388321334.999996
[2026-01-10 12:32:04] 2026-01-10 17:31:21,538 | INFO     | mean x: 1768058582.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,538 | INFO     | mean y: 2503665.411067194
[2026-01-10 12:32:04] 2026-01-10 17:31:21,538 | INFO     | intersect: 4364405724.878744
[2026-01-10 12:32:04] 2026-01-10 17:31:21,539 | INFO     | chi2: 2.341668297720027
[2026-01-10 12:32:04] 2026-01-10 17:31:21,539 | INFO     | sum of square deviations: 4729621702.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,540 | INFO     | sum of deviations: 6946268982.000004
[2026-01-10 12:32:04] 2026-01-10 17:31:21,541 | INFO     | mean x: 1768058429.5
[2026-01-10 12:32:04] 2026-01-10 17:31:21,541 | INFO     | mean y: 2513608.790322581
[2026-01-10 12:32:04] 2026-01-10 17:31:21,541 | INFO     | intersect: -2594186550.54929
[2026-01-10 12:32:04] 2026-01-10 17:31:21,541 | INFO     | chi2: 1.3464088426060556
[2026-01-10 12:32:04] 2026-01-10 17:31:21,541 | INFO     | current chi2=1.3464088426060556 (change=42.50215353229188 %)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,542 | INFO     | sum of square deviations: 4449281562.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,543 | INFO     | sum of deviations: 7025498466.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,543 | INFO     | mean x: 1768058277.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,543 | INFO     | mean y: 2513651.8971193414
[2026-01-10 12:32:04] 2026-01-10 17:31:21,543 | INFO     | intersect: -2789283302.23372
[2026-01-10 12:32:04] 2026-01-10 17:31:21,544 | INFO     | chi2: 1.346821934697513
[2026-01-10 12:32:04] 2026-01-10 17:31:21,544 | INFO     | current chi2=1.346821934697513 (change=-0.030681029296998733 %)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,544 | INFO     | right removable region: 242
[2026-01-10 12:32:04] 2026-01-10 17:31:21,544 | INFO     | sum of square deviations: 4729621702.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,546 | INFO     | sum of deviations: -47546466531.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,546 | INFO     | mean x: 1768058734.5
[2026-01-10 12:32:04] 2026-01-10 17:31:21,546 | INFO     | mean y: 2521873.919354839
[2026-01-10 12:32:04] 2026-01-10 17:31:21,546 | INFO     | intersect: 17776659160.459244
[2026-01-10 12:32:04] 2026-01-10 17:31:21,546 | INFO     | chi2: 1.0977701844900252
[2026-01-10 12:32:04] 2026-01-10 17:31:21,547 | INFO     | current chi2=1.0977701844900252 (change=53.12016712363265 %)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,547 | INFO     | sum of square deviations: 4449281562.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,548 | INFO     | sum of deviations: -50835524799.00001
[2026-01-10 12:32:04] 2026-01-10 17:31:21,548 | INFO     | mean x: 1768058887.0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,549 | INFO     | mean y: 2523633.0905349795
[2026-01-10 12:32:04] 2026-01-10 17:31:21,549 | INFO     | intersect: 20203583094.87446
[2026-01-10 12:32:04] 2026-01-10 17:31:21,549 | INFO     | chi2: 1.066722655682975
[2026-01-10 12:32:04] 2026-01-10 17:31:21,549 | INFO     | current chi2=1.066722655682975 (change=2.828235749677742 %)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,549 | INFO     | left removable region: 20
[2026-01-10 12:32:04] 2026-01-10 17:31:21,550 | INFO     | sum of square deviations: 3392567795.5
[2026-01-10 12:32:04] 2026-01-10 17:31:21,551 | INFO     | sum of deviations: -25425186251.999996
[2026-01-10 12:32:04] 2026-01-10 17:31:21,551 | INFO     | mean x: 1768058856.5
[2026-01-10 12:32:04] 2026-01-10 17:31:21,551 | INFO     | mean y: 2531754.4414414414
[2026-01-10 12:32:04] 2026-01-10 17:31:21,551 | INFO     | intersect: 13253033569.213688
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | chi2: 0.04711889269333011
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | current memory leak: -7.49 B/s (using 222 data points, chi2=0.05)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | could have reported an average CPU frequency of 2405 MHz (12 samples)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | ..............................
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | . Timing measurements:
[2026-01-10 12:32:04] 2026-01-10 17:31:21,552 | INFO     | . get job = 0 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . initial setup = 2 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . payload setup = 4 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . stage-in = 0 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . payload execution = 15376 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . stage-out = 2 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | . log creation = 0 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,553 | INFO     | ..............................
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | 
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | job summary report
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | --------------------------------------------------
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | PanDA job id: 6965382695
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | task id: 47898826
[2026-01-10 12:32:04] 2026-01-10 17:31:21,634 | INFO     | errors: (none)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | pilot state: finished 
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | transexitcode: 0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | exeerrorcode: 0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | exeerrordiag: 
[2026-01-10 12:32:04] 2026-01-10 17:31:21,635 | INFO     | exitcode: 0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | exitmsg: OK
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | cpuconsumptiontime: 117566 s
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | nevents: 400
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | neventsw: 0
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | pid: 13657
[2026-01-10 12:32:04] 2026-01-10 17:31:21,636 | INFO     | pgrp: 13657
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | corecount: 8
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | event service: False
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | sizes: {0: 2283691, 1: 2283946, 4: 2284208, 12: 2284236, 15383: 2315421, 15384: 2315420, 15387: 2324602, 15388: 2324658, 15394: 2324852}
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | --------------------------------------------------
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | 
[2026-01-10 12:32:04] 2026-01-10 17:31:21,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 12:32:04] 2026-01-10 17:31:21,661 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,661 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,661 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:32:04] 2026-01-10 17:31:21,664 | INFO     | job 6965382695 has completed (purged errors)
[2026-01-10 12:32:04] 2026-01-10 17:31:21,665 | INFO     | overall cleanup function is called
[2026-01-10 12:32:04] 2026-01-10 17:31:22,660 | INFO     | PID=27401 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 12:32:04] 2026-01-10 17:31:22,672 | INFO     | --- collectZombieJob: --- 10, [13657]
[2026-01-10 12:32:04] 2026-01-10 17:31:22,673 | INFO     | zombie collector waiting for pid 13657
[2026-01-10 12:32:04] 2026-01-10 17:31:22,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:32:04] 2026-01-10 17:31:22,673 | INFO     | collected zombie processes
[2026-01-10 12:32:04] 2026-01-10 17:31:22,673 | INFO     | will attempt to kill all subprocesses of pid=13657
[2026-01-10 12:32:04] 2026-01-10 17:31:22,772 | INFO     | process IDs to be killed: [13657] (in reverse order)
[2026-01-10 12:32:04] 2026-01-10 17:31:22,908 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:32:04] 2026-01-10 17:31:22,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:32:04] 2026-01-10 17:31:22,912 | INFO     | did not find any defunct processes belonging to 13657
[2026-01-10 12:32:04] 2026-01-10 17:31:22,915 | INFO     | did not find any defunct processes belonging to 13657
[2026-01-10 12:32:04] 2026-01-10 17:31:22,915 | INFO     | ready for new job
[2026-01-10 12:32:04] 2026-01-10 17:31:22,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:32:04] 2026-01-10 17:31:22,917 | INFO     | ***************************************
[2026-01-10 12:32:04] 2026-01-10 17:31:22,917 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:32:04] 2026-01-10 17:31:22,918 | INFO     | ***************************************
[2026-01-10 12:32:04] 2026-01-10 17:31:22,918 | INFO     | 
[2026-01-10 12:32:04] 2026-01-10 17:31:22,919 | INFO     | architecture information:
[2026-01-10 12:32:04] 2026-01-10 17:31:22,919 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:32:04] 2026-01-10 17:31:22,934 | INFO     | cat /etc/os-release:
[2026-01-10 12:32:04] NAME="CentOS Linux"
[2026-01-10 12:32:04] VERSION="7 (Core)"
[2026-01-10 12:32:04] ID="centos"
[2026-01-10 12:32:04] ID_LIKE="rhel fedora"
[2026-01-10 12:32:04] VERSION_ID="7"
[2026-01-10 12:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:32:04] ANSI_COLOR="0;31"
[2026-01-10 12:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:32:04] HOME_URL="https://www.centos.org/"
[2026-01-10 12:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:32:04] 
[2026-01-10 12:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:32:04] 
[2026-01-10 12:32:04] 2026-01-10 17:31:22,935 | INFO     | ***************************************
[2026-01-10 12:32:04] 2026-01-10 17:31:23,438 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 12:32:04] 2026-01-10 17:31:23,457 | INFO     | sufficient remaining disk space (28674359296 B)
[2026-01-10 12:32:04] 2026-01-10 17:31:23,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:32:04] 2026-01-10 17:31:23,458 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:32:04] 2026-01-10 17:31:23,458 | INFO     | update_server=False
[2026-01-10 12:32:04] 2026-01-10 17:31:23,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:32:04] 2026-01-10 17:31:23,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:32:04] 2026-01-10 17:31:23,459 | INFO     | aborting loop
[2026-01-10 12:32:04] 2026-01-10 17:31:23,459 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 12:32:04] 2026-01-10 17:31:23,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:32:04] 2026-01-10 17:31:23,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:32:04] 2026-01-10 17:31:23,460 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:32:04] 2026-01-10 17:31:23,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:32:04] 2026-01-10 17:31:23,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:32:04] 2026-01-10 17:31:24,224 | INFO     | all payload control threads have been joined
[2026-01-10 12:32:04] 2026-01-10 17:31:24,312 | INFO     | all data control threads have been joined
[2026-01-10 12:32:04] 2026-01-10 17:31:24,463 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:24,465 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:24,466 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:24,520 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:24,718 | INFO     | all job control threads have been joined
[2026-01-10 12:32:04] 2026-01-10 17:31:25,229 | INFO     | [payload] control thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,292 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,315 | INFO     | [data] control thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,319 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,466 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,476 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,494 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,516 | INFO     | [job] validate thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,724 | INFO     | [job] control thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:25,910 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:26,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:32:04] 2026-01-10 17:31:30,440 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:34,379 | INFO     | job.realtimelogging is not enabled
[2026-01-10 12:32:04] 2026-01-10 17:31:35,384 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:32:04] 2026-01-10 17:31:58,000 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:32:04] 2026-01-10 17:31:58,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552143415104)>', '<ExcThread(monitor, started 140551689053952)>']
[2026-01-10 12:32:04] 2026-01-10 17:31:59,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:32:04] 2026-01-10 17:31:59,636 | INFO     | [monitor] control thread has ended
[2026-01-10 12:32:04] 2026-01-10 17:32:03,970 | INFO     | all workflow threads have been joined
[2026-01-10 12:32:04] 2026-01-10 17:32:03,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:32:04] 2026-01-10 17:32:03,977 | INFO     | traces error code: 0
[2026-01-10 12:32:04] 2026-01-10 17:32:03,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:32:04] 2026-01-10 17:32:04,071 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:32:04] 2026-01-10 17:32:04,074 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:32:04] 2026-01-10 17:32:04,078 [wrapper] pilotpid: 27401
[2026-01-10 12:32:04] 2026-01-10 17:32:04,081 [wrapper] Pilot exit status: 0
[2026-01-10 12:32:04] 2026-01-10 17:32:04,096 [wrapper] pandaids: 6965382695
[2026-01-10 12:32:04] 2026-01-10 17:32:04,138 [wrapper] cleanup supervisor_pilot  5407 27402
[2026-01-10 12:32:04] 2026-01-10 17:32:04,142 [wrapper] Test setup, not cleaning
[2026-01-10 12:32:04] 2026-01-10 17:32:04,146 [wrapper] apfmon messages muted
[2026-01-10 12:32:04] 2026-01-10 17:32:04,150 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:32:04] 2026-01-10 17:32:04,154 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:32:04]  *** Error codes and diagnostics ***
[2026-01-10 12:32:04]     "exeErrorCode": 0,
[2026-01-10 12:32:04]     "exeErrorDiag": "",
[2026-01-10 12:32:04]     "pilotErrorCode": 0,
[2026-01-10 12:32:04]     "pilotErrorDiag": "",
[2026-01-10 12:32:04]  *** Listing of results directory ***
[2026-01-10 12:32:04] total 444036
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 12:32:04] -rwx------ 1 boincer umatlas     36322 Jan 10 08:13 runpilot2-wrapper.sh
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:32:04] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:14 run_atlas
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:14 job.xml
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas 227217798 Jan 10 08:14 EVNT.47898824._000345.pool.root.1
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 12:32:04] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:14 shared
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas    592404 Jan 10 08:14 input.tar.gz
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:14 boinc_lockfile
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas      2518 Jan 10 08:14 pandaJob.out
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas        57 Jan 10 08:14 setup.sh.local
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas    989556 Jan 10 08:14 agis_schedconf.cvmfs.json
[2026-01-10 12:32:04] drwx------ 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas 218294294 Jan 10 12:30 HITS.47898826._040271.pool.root.1
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas        95 Jan 10 12:30 pilot_heartbeat.json
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas       531 Jan 10 12:30 boinc_task_state.xml
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas      1054 Jan 10 12:31 memory_monitor_summary.json
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas   1516240 Jan 10 12:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas    479395 Jan 10 12:31 log.47898826._040271.job.log.tgz.1
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas      7862 Jan 10 12:31 heartbeat.json
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas      5953 Jan 10 12:31 init_data.xml
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 12:31 boinc_mmap_file
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas        29 Jan 10 12:31 wrapper_checkpoint.txt
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas      4624 Jan 10 12:32 pilotlog.txt
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas   2148795 Jan 10 12:32 log.47898826._040271.job.log.1
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas       357 Jan 10 12:32 output.list
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas       620 Jan 10 12:32 runtime_log
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas   2652160 Jan 10 12:32 result.tar.gz
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 12:32 runtime_log.err
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas       662 Jan 10 12:32 7xqKDmFxny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJWhKDmBZcN8n.diag
[2026-01-10 12:32:04] -rw-r--r-- 1 boincer umatlas     21102 Jan 10 12:32 stderr.txt
[2026-01-10 12:32:04] HITS file was successfully produced:
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas 218294294 Jan 10 12:30 shared/HITS.pool.root.1
[2026-01-10 12:32:04]  *** Contents of shared directory: ***
[2026-01-10 12:32:04] total 438268
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas 227217798 Jan 10 08:14 ATLAS.root_0
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 12:32:04] -rw-r--r-- 2 boincer umatlas    592404 Jan 10 08:14 input.tar.gz
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas 218294294 Jan 10 12:30 HITS.pool.root.1
[2026-01-10 12:32:04] -rw------- 1 boincer umatlas   2652160 Jan 10 12:32 result.tar.gz
12:32:05 (21680): run_atlas exited; CPU time 117748.556586
12:32:05 (21680): called boinc_finish(0)

</stderr_txt>
]]>

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