Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:35:48 (3135977): wrapper (7.7.26015): starting
17:35:48 (3135977): wrapper: running run_atlas (--nthreads 9)
[2026-01-10 17:35:48] Arguments: --nthreads 9
[2026-01-10 17:35:48] Threads: 9
[2026-01-10 17:35:48] Checking for CVMFS
[2026-01-10 17:35:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 17:35:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 17:35:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 17:35:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 17:35:48] 2.13.3.0 6317 95457 359844 154994 1 175 20874261 40960000 9499 16776704 0 267840247 99.600 291906346 29794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 17:35:48] CVMFS is ok
[2026-01-10 17:35:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 17:35:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 17:35:48] Further information can be found at the LHC@home message board.
[2026-01-10 17:35:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 17:35:48] Checking for apptainer binary...
[2026-01-10 17:35:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 17:35:48] Running /usr/bin/apptainer --version
[2026-01-10 17:35:48] apptainer version 1.4.5-2.el9
[2026-01-10 17:35:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 17:35:48] c6-8-12-2.aglt2.org
[2026-01-10 17:35:48] apptainer works
[2026-01-10 17:35:48] Set ATHENA_PROC_NUMBER=9
[2026-01-10 17:35:48] Set ATHENA_CORE_NUMBER=9
[2026-01-10 17:35:48] Starting ATLAS job with PandaID=6965383381
[2026-01-10 17:35:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:13:22]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:13:22] 2026-01-11 01:12:23,011 | INFO     | time since job start (9383s) is within the limit (349056.0s)
[2026-01-10 20:13:22] 2026-01-11 01:12:24,858 | INFO     | monitor loop #642: job 0:6965383381 is in state 'finished'
[2026-01-10 20:13:22] 2026-01-11 01:12:24,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:13:22] 2026-01-11 01:12:25,018 | INFO     | time since job start (9385s) is within the limit (349056.0s)
[2026-01-10 20:13:22] 2026-01-11 01:12:26,967 | INFO     | PID=3139672 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:13:22] 2026-01-11 01:12:26,967 | INFO     | .. there are 8 such processes running
[2026-01-10 20:13:22] 2026-01-11 01:12:27,363 | INFO     | monitor loop #643: job 0:6965383381 is in state 'finished'
[2026-01-10 20:13:22] 2026-01-11 01:12:27,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:13:22] 2026-01-11 01:12:27,968 | INFO     | time since job start (9387s) is within the limit (349056.0s)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,775 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 20:13:22] 2026-01-11 01:12:28,786 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2980.4473571428575
[2026-01-10 20:13:22] 2026-01-11 01:12:28,803 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383381/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,804 | INFO     | extracted standard info from prmon json
[2026-01-10 20:13:22] 2026-01-11 01:12:28,804 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:13:22] 2026-01-11 01:12:28,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:13:22] 2026-01-11 01:12:28,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 20:13:22] 2026-01-11 01:12:28,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 20:13:22] 2026-01-11 01:12:28,808 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:13:22] 2026-01-11 01:12:28,808 | INFO     | sum of square deviations: 1110532121.777781
[2026-01-10 20:13:22] 2026-01-11 01:12:28,809 | INFO     | sum of deviations: -17508766945.555557
[2026-01-10 20:13:22] 2026-01-11 01:12:28,809 | INFO     | mean x: 1768089222.5555556
[2026-01-10 20:13:22] 2026-01-11 01:12:28,809 | INFO     | mean y: 2654066.1241830066
[2026-01-10 20:13:22] 2026-01-11 01:12:28,809 | INFO     | intersect: 27878535843.516197
[2026-01-10 20:13:22] 2026-01-11 01:12:28,809 | INFO     | chi2: 1.5689224943991884
[2026-01-10 20:13:22] 2026-01-11 01:12:28,810 | INFO     | sum of square deviations: 1005188475.3243217
[2026-01-10 20:13:22] 2026-01-11 01:12:28,810 | INFO     | sum of deviations: -16476030556.743238
[2026-01-10 20:13:22] 2026-01-11 01:12:28,810 | INFO     | mean x: 1768089070.0675676
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | mean y: 2655561.5743243243
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | intersect: 28983379336.86224
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | chi2: 1.5663498197287997
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | current chi2=1.5663498197287997 (change=0.16397716774236704 %)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | right removable region: 147
[2026-01-10 20:13:22] 2026-01-11 01:12:28,811 | INFO     | sum of square deviations: 1005146080.1824332
[2026-01-10 20:13:22] 2026-01-11 01:12:28,812 | INFO     | sum of deviations: -38011571697.945946
[2026-01-10 20:13:22] 2026-01-11 01:12:28,812 | INFO     | mean x: 1768089375.0743244
[2026-01-10 20:13:22] 2026-01-11 01:12:28,812 | INFO     | mean y: 2683203.5405405406
[2026-01-10 20:13:22] 2026-01-11 01:12:28,812 | INFO     | intersect: 66866452932.23108
[2026-01-10 20:13:22] 2026-01-11 01:12:28,813 | INFO     | chi2: 0.25154331243281
[2026-01-10 20:13:22] 2026-01-11 01:12:28,813 | INFO     | current chi2=0.25154331243281 (change=83.96712945790625 %)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,813 | INFO     | sum of square deviations: 906679879.1188821
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | sum of deviations: -32297146427.384605
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | mean x: 1768089527.5664337
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | mean y: 2674339.4615384615
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | intersect: 62984381206.09312
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | chi2: 0.2461214829160235
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | current chi2=0.2461214829160235 (change=2.155425824820803 %)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,814 | INFO     | left removable region: 20
[2026-01-10 20:13:22] 2026-01-11 01:12:28,815 | INFO     | sum of square deviations: 635153137.3070884
[2026-01-10 20:13:22] 2026-01-11 01:12:28,815 | INFO     | sum of deviations: -17481702253.834656
[2026-01-10 20:13:22] 2026-01-11 01:12:28,815 | INFO     | mean x: 1768089649.559055
[2026-01-10 20:13:22] 2026-01-11 01:12:28,815 | INFO     | mean y: 2652372.377952756
[2026-01-10 20:13:22] 2026-01-11 01:12:28,815 | INFO     | intersect: 48666848447.55856
[2026-01-10 20:13:22] 2026-01-11 01:12:28,816 | INFO     | chi2: 0.19375355705506447
[2026-01-10 20:13:22] 2026-01-11 01:12:28,816 | INFO     | current memory leak: -27.52 B/s (using 127 data points, chi2=0.19)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,816 | INFO     | could have reported an average CPU frequency of 3009 MHz (9 samples)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,816 | INFO     | ..............................
[2026-01-10 20:13:22] 2026-01-11 01:12:28,816 | INFO     | . Timing measurements:
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . get job = 0 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . initial setup = 2 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . payload setup = 5 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . stage-in = 0 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . payload execution = 9337 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . stage-out = 1 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | . log creation = 0 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,817 | INFO     | ..............................
[2026-01-10 20:13:22] 2026-01-11 01:12:28,904 | INFO     | 
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | job summary report
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | --------------------------------------------------
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | PanDA job id: 6965383381
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | task id: 47898826
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | errors: (none)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | pilot state: finished 
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | transexitcode: 0
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | exeerrorcode: 0
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | exeerrordiag: 
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | exitcode: 0
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | exitmsg: OK
[2026-01-10 20:13:22] 2026-01-11 01:12:28,905 | INFO     | cpuconsumptiontime: 54411 s
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | nevents: 400
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | neventsw: 0
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | pid: 3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | pgrp: 3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | corecount: 9
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | event service: False
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | sizes: {0: 2283749, 1: 2283948, 5: 2284210, 11: 2284266, 9346: 2312768, 9348: 2321766, 9349: 2321950, 9373: 2322208}
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | --------------------------------------------------
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | 
[2026-01-10 20:13:22] 2026-01-11 01:12:28,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 20:13:22] 2026-01-11 01:12:28,925 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:13:22] 2026-01-11 01:12:28,927 | INFO     | job 6965383381 has completed (purged errors)
[2026-01-10 20:13:22] 2026-01-11 01:12:28,928 | INFO     | overall cleanup function is called
[2026-01-10 20:13:22] 2026-01-11 01:12:29,937 | INFO     | --- collectZombieJob: --- 10, [3148716]
[2026-01-10 20:13:22] 2026-01-11 01:12:29,937 | INFO     | zombie collector waiting for pid 3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:29,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:13:22] 2026-01-11 01:12:29,937 | INFO     | collected zombie processes
[2026-01-10 20:13:22] 2026-01-11 01:12:29,937 | INFO     | will attempt to kill all subprocesses of pid=3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:30,177 | INFO     | process IDs to be killed: [3148716] (in reverse order)
[2026-01-10 20:13:22] 2026-01-11 01:12:30,261 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:13:22] 2026-01-11 01:12:30,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:13:22] 2026-01-11 01:12:30,271 | INFO     | did not find any defunct processes belonging to 3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:30,280 | INFO     | did not find any defunct processes belonging to 3148716
[2026-01-10 20:13:22] 2026-01-11 01:12:30,280 | INFO     | ready for new job
[2026-01-10 20:13:22] 2026-01-11 01:12:30,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:13:22] 2026-01-11 01:12:30,282 | INFO     | ***************************************
[2026-01-10 20:13:22] 2026-01-11 01:12:30,283 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:13:22] 2026-01-11 01:12:30,283 | INFO     | ***************************************
[2026-01-10 20:13:22] 2026-01-11 01:12:30,283 | INFO     | 
[2026-01-10 20:13:22] 2026-01-11 01:12:30,286 | INFO     | architecture information:
[2026-01-10 20:13:22] 2026-01-11 01:12:30,286 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:13:22] 2026-01-11 01:12:30,304 | INFO     | cat /etc/os-release:
[2026-01-10 20:13:22] NAME="CentOS Linux"
[2026-01-10 20:13:22] VERSION="7 (Core)"
[2026-01-10 20:13:22] ID="centos"
[2026-01-10 20:13:22] ID_LIKE="rhel fedora"
[2026-01-10 20:13:22] VERSION_ID="7"
[2026-01-10 20:13:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:13:22] ANSI_COLOR="0;31"
[2026-01-10 20:13:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:13:22] HOME_URL="https://www.centos.org/"
[2026-01-10 20:13:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:13:22] 
[2026-01-10 20:13:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:13:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:13:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:13:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:13:22] 
[2026-01-10 20:13:22] 2026-01-11 01:12:30,304 | INFO     | ***************************************
[2026-01-10 20:13:22] 2026-01-11 01:12:30,808 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 20:13:22] 2026-01-11 01:12:30,840 | INFO     | sufficient remaining disk space (75454480384 B)
[2026-01-10 20:13:22] 2026-01-11 01:12:30,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:13:22] 2026-01-11 01:12:30,840 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:13:22] 2026-01-11 01:12:30,840 | INFO     | update_server=False
[2026-01-10 20:13:22] 2026-01-11 01:12:30,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:13:22] 2026-01-11 01:12:30,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:13:22] 2026-01-11 01:12:30,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:13:22] 2026-01-11 01:12:30,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:13:22] 2026-01-11 01:12:30,874 | INFO     | aborting loop
[2026-01-10 20:13:22] 2026-01-11 01:12:30,974 | INFO     | all data control threads have been joined
[2026-01-10 20:13:22] 2026-01-11 01:12:31,162 | INFO     | all job control threads have been joined
[2026-01-10 20:13:22] 2026-01-11 01:12:31,791 | INFO     | all payload control threads have been joined
[2026-01-10 20:13:22] 2026-01-11 01:12:31,847 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:31,847 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:31,882 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:31,909 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:31,928 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:31,980 | INFO     | [data] control thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,051 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,168 | INFO     | [job] control thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,264 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,355 | INFO     | [job] validate thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,470 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,797 | INFO     | [payload] control thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:32,848 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:33,294 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:12:33,895 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:13:22] 2026-01-11 01:12:37,904 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:13:22] 2026-01-11 01:13:01,597 | INFO     | PID=3139672 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 20:13:22] 2026-01-11 01:13:01,597 | INFO     | .. there are 8 such processes running
[2026-01-10 20:13:22] 2026-01-11 01:13:01,598 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:13:22] 2026-01-11 01:13:01,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:13:22] 2026-01-11 01:13:01,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:13:22] 2026-01-11 01:13:15,763 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:13:22] 2026-01-11 01:13:16,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114874885952)>', '<ExcThread(monitor, started 140114239940352)>']
[2026-01-10 20:13:22] 2026-01-11 01:13:17,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:13:22] 2026-01-11 01:13:17,694 | INFO     | [monitor] control thread has ended
[2026-01-10 20:13:22] 2026-01-11 01:13:21,796 | INFO     | all workflow threads have been joined
[2026-01-10 20:13:22] 2026-01-11 01:13:21,796 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:13:22] 2026-01-11 01:13:21,796 | INFO     | traces error code: 0
[2026-01-10 20:13:22] 2026-01-11 01:13:21,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:13:22] 2026-01-11 01:13:22,116 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:13:22] 2026-01-11 01:13:22,119 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:13:22] 2026-01-11 01:13:22,121 [wrapper] pilotpid: 3139672
[2026-01-10 20:13:22] 2026-01-11 01:13:22,123 [wrapper] Pilot exit status: 0
[2026-01-10 20:13:22] 2026-01-11 01:13:22,217 [wrapper] pandaids: 6965383381
[2026-01-10 20:13:22] 2026-01-11 01:13:22,388 [wrapper] cleanup supervisor_pilot 3429605 3139673
[2026-01-10 20:13:22] 2026-01-11 01:13:22,404 [wrapper] Test setup, not cleaning
[2026-01-10 20:13:22] 2026-01-11 01:13:22,428 [wrapper] apfmon messages muted
[2026-01-10 20:13:22] 2026-01-11 01:13:22,431 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:13:22] 2026-01-11 01:13:22,434 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:13:22]  *** Error codes and diagnostics ***
[2026-01-10 20:13:22]     "exeErrorCode": 0,
[2026-01-10 20:13:22]     "exeErrorDiag": "",
[2026-01-10 20:13:22]     "pilotErrorCode": 0,
[2026-01-10 20:13:22]     "pilotErrorDiag": "",
[2026-01-10 20:13:22]  *** Listing of results directory ***
[2026-01-10 20:13:22] total 441960
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 20:13:22] -rwx------. 1 boincer umatlas     36322 Jan 10 08:13 runpilot2-wrapper.sh
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas       100 Jan 10 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:13:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 17:35 run_atlas
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas       105 Jan 10 17:35 job.xml
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas 223693817 Jan 10 17:35 EVNT.47898824._001389.pool.root.1
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 17:35 start_atlas.sh
[2026-01-10 20:13:22] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 17:35 shared
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 17:35 input.tar.gz
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas         0 Jan 10 17:35 boinc_lockfile
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 17:35 pandaJob.out
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas        57 Jan 10 17:35 setup.sh.local
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas    989548 Jan 10 17:35 agis_schedconf.cvmfs.json
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:35 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:13:22] drwx------. 5 boincer umatlas      4096 Jan 10 17:36 pilot3
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas 221552890 Jan 10 20:11 HITS.47898826._040521.pool.root.1
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas       530 Jan 10 20:11 boinc_task_state.xml
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas      1035 Jan 10 20:11 memory_monitor_summary.json
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas    417673 Jan 10 20:12 log.47898826._040521.job.log.tgz.1
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas      7812 Jan 10 20:12 heartbeat.json
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas      6840 Jan 10 20:12 init_data.xml
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas        95 Jan 10 20:13 pilot_heartbeat.json
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 20:13 boinc_mmap_file
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas        27 Jan 10 20:13 wrapper_checkpoint.txt
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas      4823 Jan 10 20:13 pilotlog.txt
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas   1288531 Jan 10 20:13 log.47898826._040521.job.log.1
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas       357 Jan 10 20:13 output.list
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas       620 Jan 10 20:13 runtime_log
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas   1720320 Jan 10 20:13 result.tar.gz
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas      9347 Jan 10 20:13 runtime_log.err
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas       654 Jan 10 20:13 nQ8LDmFxny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4WhKDmB9Adwm.diag
[2026-01-10 20:13:22] -rw-r--r--. 1 boincer umatlas     21470 Jan 10 20:13 stderr.txt
[2026-01-10 20:13:22] HITS file was successfully produced:
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas 221552890 Jan 10 20:11 shared/HITS.pool.root.1
[2026-01-10 20:13:22]  *** Contents of shared directory: ***
[2026-01-10 20:13:22] total 437096
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas 223693817 Jan 10 17:35 ATLAS.root_0
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 17:35 start_atlas.sh
[2026-01-10 20:13:22] -rw-r--r--. 2 boincer umatlas    592406 Jan 10 17:35 input.tar.gz
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas 221552890 Jan 10 20:11 HITS.pool.root.1
[2026-01-10 20:13:22] -rw-------. 1 boincer umatlas   1720320 Jan 10 20:13 result.tar.gz
20:13:24 (3135977): run_atlas exited; CPU time 54611.256844
20:13:24 (3135977): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN