Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:06 (1421395): wrapper (7.7.26015): starting
08:14:06 (1421395): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:14:06] Arguments: --nthreads 8
[2026-01-10 08:14:06] Threads: 8
[2026-01-10 08:14:06] Checking for CVMFS
[2026-01-10 08:14:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:14:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:14:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:14:07] 2.13.3.0 11250 94896 353040 154980 0 541 31899173 32935936 11384 16776704 0 278326779 99.474 388849548 40031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:14:07] CVMFS is ok
[2026-01-10 08:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:14:07] Further information can be found at the LHC@home message board.
[2026-01-10 08:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:14:07] Checking for apptainer binary...
[2026-01-10 08:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:14:07] Running /usr/bin/apptainer --version
[2026-01-10 08:14:07] apptainer version 1.4.5-2.el9
[2026-01-10 08:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:14:07] c6-2-29-1.aglt2.org
[2026-01-10 08:14:07] apptainer works
[2026-01-10 08:14:07] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:14:07] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:14:07] Starting ATLAS job with PandaID=6965383315
[2026-01-10 08:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:10:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:10:03] 2026-01-10 18:09:05,154 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383315/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,154 | INFO     | extracted standard info from prmon json
[2026-01-10 13:10:03] 2026-01-10 18:09:05,154 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:10:03] 2026-01-10 18:09:05,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:10:03] 2026-01-10 18:09:05,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:10:03] 2026-01-10 18:09:05,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:10:03] 2026-01-10 18:09:05,217 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:10:03] 2026-01-10 18:09:05,217 | INFO     | sum of square deviations: 7484923174.415185
[2026-01-10 13:10:03] 2026-01-10 18:09:05,253 | INFO     | sum of deviations: -121043607788.9412
[2026-01-10 13:10:03] 2026-01-10 18:09:05,254 | INFO     | mean x: 1768059687.0449827
[2026-01-10 13:10:03] 2026-01-10 18:09:05,254 | INFO     | mean y: 2625495.7647058824
[2026-01-10 13:10:03] 2026-01-10 18:09:05,254 | INFO     | intersect: 28595079729.315643
[2026-01-10 13:10:03] 2026-01-10 18:09:05,254 | INFO     | chi2: 2.631633237004522
[2026-01-10 13:10:03] 2026-01-10 18:09:05,255 | INFO     | sum of square deviations: 7103134176.404947
[2026-01-10 13:10:03] 2026-01-10 18:09:05,256 | INFO     | sum of deviations: -98099769845.088
[2026-01-10 13:10:03] 2026-01-10 18:09:05,257 | INFO     | mean x: 1768059534.5457747
[2026-01-10 13:10:03] 2026-01-10 18:09:05,257 | INFO     | mean y: 2634547.9683098593
[2026-01-10 13:10:03] 2026-01-10 18:09:05,292 | INFO     | intersect: 24420902470.810627
[2026-01-10 13:10:03] 2026-01-10 18:09:05,293 | INFO     | chi2: 1.8128707834884727
[2026-01-10 13:10:03] 2026-01-10 18:09:05,293 | INFO     | current chi2=1.8128707834884727 (change=31.112331384293213 %)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,293 | INFO     | sum of square deviations: 6734554486.394272
[2026-01-10 13:10:03] 2026-01-10 18:09:05,295 | INFO     | sum of deviations: -95727332817.57341
[2026-01-10 13:10:03] 2026-01-10 18:09:05,295 | INFO     | mean x: 1768059382.046595
[2026-01-10 13:10:03] 2026-01-10 18:09:05,295 | INFO     | mean y: 2635529.6594982077
[2026-01-10 13:10:03] 2026-01-10 18:09:05,295 | INFO     | intersect: 25134455199.148296
[2026-01-10 13:10:03] 2026-01-10 18:09:05,295 | INFO     | chi2: 1.8073525395741505
[2026-01-10 13:10:03] 2026-01-10 18:09:05,296 | INFO     | current chi2=1.8073525395741505 (change=0.30439256700378586 %)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,296 | INFO     | right removable region: 278
[2026-01-10 13:10:03] 2026-01-10 18:09:05,333 | INFO     | sum of square deviations: 7103037853.859113
[2026-01-10 13:10:03] 2026-01-10 18:09:05,335 | INFO     | sum of deviations: -159096450362.57742
[2026-01-10 13:10:03] 2026-01-10 18:09:05,335 | INFO     | mean x: 1768059839.5633802
[2026-01-10 13:10:03] 2026-01-10 18:09:05,335 | INFO     | mean y: 2640544.5598591547
[2026-01-10 13:10:03] 2026-01-10 18:09:05,335 | INFO     | intersect: 39604294131.45926
[2026-01-10 13:10:03] 2026-01-10 18:09:05,336 | INFO     | chi2: 1.3510170781380646
[2026-01-10 13:10:03] 2026-01-10 18:09:05,336 | INFO     | current chi2=1.3510170781380646 (change=48.66241012840107 %)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,336 | INFO     | sum of square deviations: 6734431139.706105
[2026-01-10 13:10:03] 2026-01-10 18:09:05,364 | INFO     | sum of deviations: -150167349133.84232
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | mean x: 1768059992.0681005
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | mean y: 2636832.9390681004
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | intersect: 39427627097.23268
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | chi2: 1.3411461733527688
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | current chi2=1.3411461733527688 (change=0.7306276837669333 %)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,365 | INFO     | left removable region: 20
[2026-01-10 13:10:03] 2026-01-10 18:09:05,366 | INFO     | sum of square deviations: 5325329818.624051
[2026-01-10 13:10:03] 2026-01-10 18:09:05,376 | INFO     | sum of deviations: -99757928594.37987
[2026-01-10 13:10:03] 2026-01-10 18:09:05,377 | INFO     | mean x: 1768059961.5852714
[2026-01-10 13:10:03] 2026-01-10 18:09:05,377 | INFO     | mean y: 2636325.426356589
[2026-01-10 13:10:03] 2026-01-10 18:09:05,377 | INFO     | intersect: 33123213905.723106
[2026-01-10 13:10:03] 2026-01-10 18:09:05,377 | INFO     | chi2: 0.4688390000079556
[2026-01-10 13:10:03] 2026-01-10 18:09:05,377 | INFO     | current memory leak: -18.73 B/s (using 258 data points, chi2=0.47)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | could have reported an average CPU frequency of 2996 MHz (13 samples)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | ..............................
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . Timing measurements:
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . get job = 0 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . initial setup = 3 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . payload setup = 9 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . stage-in = 0 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . payload execution = 17616 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,378 | INFO     | . stage-out = 5 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,379 | INFO     | . log creation = 0 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,379 | INFO     | ..............................
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | 
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | job summary report
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | --------------------------------------------------
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | PanDA job id: 6965383315
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | task id: 47898826
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | errors: (none)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,713 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | pilot state: finished 
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | transexitcode: 0
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | exeerrorcode: 0
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | exeerrordiag: 
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | exitcode: 0
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | exitmsg: OK
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | cpuconsumptiontime: 55174 s
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | nevents: 400
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | neventsw: 0
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | pid: 1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | pgrp: 1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | corecount: 8
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | event service: False
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | sizes: {0: 2283920, 1: 2283920, 6: 2284210, 12: 2284238, 17630: 2316444, 17636: 2325442, 17640: 2325626, 17660: 2325820}
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | --------------------------------------------------
[2026-01-10 13:10:03] 2026-01-10 18:09:05,714 | INFO     | 
[2026-01-10 13:10:03] 2026-01-10 18:09:05,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 13:10:03] 2026-01-10 18:09:05,776 | INFO     | time since job start (17680s) is within the limit (349056.0s)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,777 | INFO     | 17683s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 13:10:03] 2026-01-10 18:09:05,914 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,914 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,914 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | job 6965383315 has completed (purged errors)
[2026-01-10 13:10:03] 2026-01-10 18:09:05,933 | INFO     | overall cleanup function is called
[2026-01-10 13:10:03] 2026-01-10 18:09:06,976 | INFO     | --- collectZombieJob: --- 10, [1433685]
[2026-01-10 13:10:03] 2026-01-10 18:09:06,976 | INFO     | zombie collector waiting for pid 1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:06,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:10:03] 2026-01-10 18:09:06,978 | INFO     | collected zombie processes
[2026-01-10 13:10:03] 2026-01-10 18:09:06,978 | INFO     | will attempt to kill all subprocesses of pid=1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:08,948 | INFO     | PID=1426251 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:10:03] 2026-01-10 18:09:08,948 | INFO     | .. there are 15 such processes running
[2026-01-10 13:10:03] 2026-01-10 18:09:09,041 | INFO     | process IDs to be killed: [1433685] (in reverse order)
[2026-01-10 13:10:03] 2026-01-10 18:09:09,210 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:10:03] 2026-01-10 18:09:09,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:10:03] 2026-01-10 18:09:09,279 | INFO     | did not find any defunct processes belonging to 1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:09,337 | INFO     | did not find any defunct processes belonging to 1433685
[2026-01-10 13:10:03] 2026-01-10 18:09:09,338 | INFO     | ready for new job
[2026-01-10 13:10:03] 2026-01-10 18:09:09,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:10:03] 2026-01-10 18:09:09,346 | INFO     | ***************************************
[2026-01-10 13:10:03] 2026-01-10 18:09:09,348 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:10:03] 2026-01-10 18:09:09,348 | INFO     | ***************************************
[2026-01-10 13:10:03] 2026-01-10 18:09:09,348 | INFO     | 
[2026-01-10 13:10:03] 2026-01-10 18:09:09,363 | INFO     | architecture information:
[2026-01-10 13:10:03] 2026-01-10 18:09:09,363 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:10:03] 2026-01-10 18:09:09,379 | INFO     | cat /etc/os-release:
[2026-01-10 13:10:03] NAME="CentOS Linux"
[2026-01-10 13:10:03] VERSION="7 (Core)"
[2026-01-10 13:10:03] ID="centos"
[2026-01-10 13:10:03] ID_LIKE="rhel fedora"
[2026-01-10 13:10:03] VERSION_ID="7"
[2026-01-10 13:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:10:03] ANSI_COLOR="0;31"
[2026-01-10 13:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:10:03] HOME_URL="https://www.centos.org/"
[2026-01-10 13:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:10:03] 
[2026-01-10 13:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:10:03] 
[2026-01-10 13:10:03] 2026-01-10 18:09:09,380 | INFO     | ***************************************
[2026-01-10 13:10:03] 2026-01-10 18:09:09,882 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 13:10:03] 2026-01-10 18:09:09,991 | INFO     | sufficient remaining disk space (74738302976 B)
[2026-01-10 13:10:03] 2026-01-10 18:09:09,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:10:03] 2026-01-10 18:09:09,992 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:10:03] 2026-01-10 18:09:09,992 | INFO     | update_server=False
[2026-01-10 13:10:03] 2026-01-10 18:09:09,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:10:03] 2026-01-10 18:09:10,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:10:03] 2026-01-10 18:09:10,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:10:03] 2026-01-10 18:09:10,366 | INFO     | aborting loop
[2026-01-10 13:10:03] 2026-01-10 18:09:10,370 | INFO     | all data control threads have been joined
[2026-01-10 13:10:03] 2026-01-10 18:09:10,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:10:03] 2026-01-10 18:09:10,727 | INFO     | all payload control threads have been joined
[2026-01-10 13:10:03] 2026-01-10 18:09:10,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:10:03] 2026-01-10 18:09:10,998 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,182 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,284 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,326 | INFO     | all job control threads have been joined
[2026-01-10 13:10:03] 2026-01-10 18:09:11,372 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,376 | INFO     | [data] control thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,713 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,733 | INFO     | [payload] control thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,780 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,849 | INFO     | [job] validate thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:11,985 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:12,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:12,332 | INFO     | [job] control thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:12,347 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:12,354 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:12,613 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:14,106 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:10:03] 2026-01-10 18:09:41,930 | INFO     | PID=1426251 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:10:03] 2026-01-10 18:09:41,930 | INFO     | .. there are 15 such processes running
[2026-01-10 13:10:03] 2026-01-10 18:09:41,930 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:10:03] 2026-01-10 18:09:41,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:10:03] 2026-01-10 18:09:41,931 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:10:03] 2026-01-10 18:09:56,667 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:10:03] 2026-01-10 18:09:57,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895226525504)>', '<ExcThread(monitor, started 139894953318144)>']
[2026-01-10 13:10:03] 2026-01-10 18:09:58,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:10:03] 2026-01-10 18:09:58,043 | INFO     | [monitor] control thread has ended
[2026-01-10 13:10:03] 2026-01-10 18:10:02,194 | INFO     | all workflow threads have been joined
[2026-01-10 13:10:03] 2026-01-10 18:10:02,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:10:03] 2026-01-10 18:10:02,194 | INFO     | traces error code: 0
[2026-01-10 13:10:03] 2026-01-10 18:10:02,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:10:03] 2026-01-10 18:10:02,450 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:10:03] 2026-01-10 18:10:02,453 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:10:03] 2026-01-10 18:10:02,465 [wrapper] pilotpid: 1426251
[2026-01-10 13:10:03] 2026-01-10 18:10:02,477 [wrapper] Pilot exit status: 0
[2026-01-10 13:10:03] 2026-01-10 18:10:02,546 [wrapper] pandaids: 6965383315
[2026-01-10 13:10:03] 2026-01-10 18:10:02,724 [wrapper] cleanup supervisor_pilot 2302265 1426252
[2026-01-10 13:10:03] 2026-01-10 18:10:02,727 [wrapper] Test setup, not cleaning
[2026-01-10 13:10:03] 2026-01-10 18:10:02,729 [wrapper] apfmon messages muted
[2026-01-10 13:10:03] 2026-01-10 18:10:02,731 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:10:03] 2026-01-10 18:10:02,734 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:10:03]  *** Error codes and diagnostics ***
[2026-01-10 13:10:03]     "exeErrorCode": 0,
[2026-01-10 13:10:03]     "exeErrorDiag": "",
[2026-01-10 13:10:03]     "pilotErrorCode": 0,
[2026-01-10 13:10:03]     "pilotErrorDiag": "",
[2026-01-10 13:10:03]  *** Listing of results directory ***
[2026-01-10 13:10:03] total 444208
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 13:10:03] -rwx------. 1 boincer umatlas     36322 Jan 10 08:13 runpilot2-wrapper.sh
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:10:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:14 run_atlas
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:14 job.xml
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas 225761115 Jan 10 08:14 EVNT.47898824._001310.pool.root.1
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 13:10:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:14 shared
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas    592401 Jan 10 08:14 input.tar.gz
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:14 boinc_lockfile
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:14 pandaJob.out
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas        57 Jan 10 08:14 setup.sh.local
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas    989556 Jan 10 08:14 agis_schedconf.cvmfs.json
[2026-01-10 13:10:03] drwx------. 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 13:04 init_data.xml
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas 219628661 Jan 10 13:07 HITS.47898826._040455.pool.root.1
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas       531 Jan 10 13:07 boinc_task_state.xml
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas      1040 Jan 10 13:08 memory_monitor_summary.json
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas   1516240 Jan 10 13:08 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas    511140 Jan 10 13:08 log.47898826._040455.job.log.tgz.1
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas        95 Jan 10 13:09 pilot_heartbeat.json
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas      7824 Jan 10 13:09 heartbeat.json
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 13:09 boinc_mmap_file
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas        28 Jan 10 13:09 wrapper_checkpoint.txt
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas      4824 Jan 10 13:10 pilotlog.txt
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas   2269879 Jan 10 13:10 log.47898826._040455.job.log.1
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas       357 Jan 10 13:10 output.list
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas       620 Jan 10 13:10 runtime_log
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas   2795520 Jan 10 13:10 result.tar.gz
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas       658 Jan 10 13:10 zxeLDmFxny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkWhKDm0Eghkn.diag
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 13:10 runtime_log.err
[2026-01-10 13:10:03] -rw-r--r--. 1 boincer umatlas     21049 Jan 10 13:10 stderr.txt
[2026-01-10 13:10:03] HITS file was successfully produced:
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas 219628661 Jan 10 13:07 shared/HITS.pool.root.1
[2026-01-10 13:10:03]  *** Contents of shared directory: ***
[2026-01-10 13:10:03] total 438292
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas 225761115 Jan 10 08:14 ATLAS.root_0
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 13:10:03] -rw-r--r--. 2 boincer umatlas    592401 Jan 10 08:14 input.tar.gz
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas 219628661 Jan 10 13:07 HITS.pool.root.1
[2026-01-10 13:10:03] -rw-------. 1 boincer umatlas   2795520 Jan 10 13:10 result.tar.gz
13:10:04 (1421395): run_atlas exited; CPU time 55592.887575
13:10:04 (1421395): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN