Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:14:02 (1772): wrapper (7.7.26015): starting
14:14:02 (1772): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 14:14:02] Arguments: --nthreads 8
[2026-01-10 14:14:02] Threads: 8
[2026-01-10 14:14:02] Checking for CVMFS
[2026-01-10 14:14:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:14:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:14:05] 2.11.2.0 13917 36883 122940 154980 1 62 21712672 25165824 899 130560 0 16441673 99.841 9204586 3875 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 14:14:05] CVMFS is ok
[2026-01-10 14:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:14:05] Checking for apptainer binary...
[2026-01-10 14:14:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 14:14:05] Running /usr/bin/apptainer --version
[2026-01-10 14:14:05] apptainer version 1.3.2-1.el7
[2026-01-10 14:14:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:14:20] cg-vwn371.simple-grid.lan
[2026-01-10 14:14:20] apptainer works
[2026-01-10 14:14:20] Set ATHENA_PROC_NUMBER=8
[2026-01-10 14:14:20] Set ATHENA_CORE_NUMBER=8
[2026-01-10 14:14:20] Starting ATLAS job with PandaID=6965383331
[2026-01-10 14:14:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:43:40]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:43:40] 2026-01-10 18:43:01,614 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:43:40] 2026-01-10 18:43:01,615 | INFO     | sum of square deviations: 9059954057.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,618 | INFO     | sum of deviations: 148311898965.9999
[2026-01-10 19:43:40] 2026-01-10 18:43:01,618 | INFO     | mean x: 1768061044.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,618 | INFO     | mean y: 2441742.714285714
[2026-01-10 19:43:40] 2026-01-10 18:43:01,618 | INFO     | intersect: -28940805579.274235
[2026-01-10 19:43:40] 2026-01-10 18:43:01,619 | INFO     | chi2: 9.654089621485308
[2026-01-10 19:43:40] 2026-01-10 18:43:01,620 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,623 | INFO     | sum of deviations: 166042871568.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,623 | INFO     | mean x: 1768060892.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,623 | INFO     | mean y: 2447876.9933993397
[2026-01-10 19:43:40] 2026-01-10 18:43:01,623 | INFO     | intersect: -34031777817.41095
[2026-01-10 19:43:40] 2026-01-10 18:43:01,624 | INFO     | chi2: 8.958282458720948
[2026-01-10 19:43:40] 2026-01-10 18:43:01,624 | INFO     | current chi2=8.958282458720948 (change=7.207382467382861 %)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,624 | INFO     | right removable region: 302
[2026-01-10 19:43:40] 2026-01-10 18:43:01,625 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,628 | INFO     | sum of deviations: 38660076140.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,628 | INFO     | mean x: 1768061197.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,628 | INFO     | mean y: 2480247.8679867988
[2026-01-10 19:43:40] 2026-01-10 18:43:01,628 | INFO     | intersect: -7921774321.226399
[2026-01-10 19:43:40] 2026-01-10 18:43:01,629 | INFO     | chi2: 4.423221296567243
[2026-01-10 19:43:40] 2026-01-10 18:43:01,637 | INFO     | current chi2=4.423221296567243 (change=54.18292692535914 %)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,638 | INFO     | sum of square deviations: 8205826414.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,641 | INFO     | sum of deviations: -47394027195.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,641 | INFO     | mean x: 1768061349.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,641 | INFO     | mean y: 2511464.0704697985
[2026-01-10 19:43:40] 2026-01-10 18:43:01,641 | INFO     | intersect: 10214224879.485348
[2026-01-10 19:43:40] 2026-01-10 18:43:01,642 | INFO     | chi2: 1.397557509403827
[2026-01-10 19:43:40] 2026-01-10 18:43:01,642 | INFO     | current chi2=1.397557509403827 (change=68.40407893477004 %)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,642 | INFO     | sum of square deviations: 7799669962.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,645 | INFO     | sum of deviations: -70401359284.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,646 | INFO     | mean x: 1768061502.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,646 | INFO     | mean y: 2520036.829351536
[2026-01-10 19:43:40] 2026-01-10 18:43:01,646 | INFO     | intersect: 15961391841.014376
[2026-01-10 19:43:40] 2026-01-10 18:43:01,646 | INFO     | chi2: 0.9971998665679893
[2026-01-10 19:43:40] 2026-01-10 18:43:01,647 | INFO     | current chi2=0.9971998665679893 (change=28.64695299777847 %)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,647 | INFO     | sum of square deviations: 7407141672.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,650 | INFO     | sum of deviations: -65052709917.50001
[2026-01-10 19:43:40] 2026-01-10 18:43:01,650 | INFO     | mean x: 1768061654.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,650 | INFO     | mean y: 2517944.621527778
[2026-01-10 19:43:40] 2026-01-10 18:43:01,650 | INFO     | intersect: 15530397256.181648
[2026-01-10 19:43:40] 2026-01-10 18:43:01,651 | INFO     | chi2: 0.9861195388310355
[2026-01-10 19:43:40] 2026-01-10 18:43:01,651 | INFO     | current chi2=0.9861195388310355 (change=1.1111441255089978 %)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,651 | INFO     | left removable region: 40
[2026-01-10 19:43:40] 2026-01-10 18:43:01,652 | INFO     | sum of square deviations: 5576683165.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,654 | INFO     | sum of deviations: -6834165378.0
[2026-01-10 19:43:40] 2026-01-10 18:43:01,655 | INFO     | mean x: 1768062081.5
[2026-01-10 19:43:40] 2026-01-10 18:43:01,655 | INFO     | mean y: 2508929.4809160307
[2026-01-10 19:43:40] 2026-01-10 18:43:01,655 | INFO     | intersect: 2169250037.9402385
[2026-01-10 19:43:40] 2026-01-10 18:43:01,655 | INFO     | chi2: 0.08261591578355845
[2026-01-10 19:43:40] 2026-01-10 18:43:01,656 | INFO     | current memory leak: -1.23 B/s (using 262 data points, chi2=0.08)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,656 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-10 19:43:40] 2026-01-10 18:43:01,656 | INFO     | ..............................
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . Timing measurements:
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . get job = 0 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . initial setup = 12 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . payload setup = 163 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . stage-in = 0 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . payload execution = 18954 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . stage-out = 5 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | . log creation = 1 s
[2026-01-10 19:43:40] 2026-01-10 18:43:01,657 | INFO     | ..............................
[2026-01-10 19:43:40] 2026-01-10 18:43:02,242 | INFO     | time since job start (19457s) is within the limit (349056.0s)
[2026-01-10 19:43:40] 2026-01-10 18:43:02,259 | INFO     | 
[2026-01-10 19:43:40] 2026-01-10 18:43:02,259 | INFO     | job summary report
[2026-01-10 19:43:40] 2026-01-10 18:43:02,259 | INFO     | --------------------------------------------------
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | PanDA job id: 6965383331
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | task id: 47898826
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | errors: (none)
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | pilot state: finished 
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | transexitcode: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | exeerrorcode: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | exeerrordiag: 
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | exitcode: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | exitmsg: OK
[2026-01-10 19:43:40] 2026-01-10 18:43:02,260 | INFO     | cpuconsumptiontime: 80218 s
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | nevents: 400
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | neventsw: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | pid: 12207
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | pgrp: 12207
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | corecount: 8
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | event service: False
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | sizes: {0: 2283092, 1: 2283777, 2: 2283976, 13: 2283976, 23: 2284032, 34: 2284060, 45: 2284216, 56: 2284244, 66: 2284272, 77: 2284300, 88: 2284356, 99: 2284664, 10
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | --------------------------------------------------
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | 
[2026-01-10 19:43:40] 2026-01-10 18:43:02,261 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 19:43:40] 2026-01-10 18:43:02,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:43:40] 2026-01-10 18:43:02,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:43:40] 2026-01-10 18:43:02,790 | INFO     | job 6965383331 has completed (purged errors)
[2026-01-10 19:43:40] 2026-01-10 18:43:02,790 | INFO     | overall cleanup function is called
[2026-01-10 19:43:40] 2026-01-10 18:43:03,799 | INFO     | --- collectZombieJob: --- 10, [12207]
[2026-01-10 19:43:40] 2026-01-10 18:43:03,799 | INFO     | zombie collector waiting for pid 12207
[2026-01-10 19:43:40] 2026-01-10 18:43:03,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:43:40] 2026-01-10 18:43:03,799 | INFO     | collected zombie processes
[2026-01-10 19:43:40] 2026-01-10 18:43:03,800 | INFO     | will attempt to kill all subprocesses of pid=12207
[2026-01-10 19:43:40] 2026-01-10 18:43:03,898 | INFO     | process IDs to be killed: [12207] (in reverse order)
[2026-01-10 19:43:40] 2026-01-10 18:43:04,788 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:43:40] 2026-01-10 18:43:04,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:43:40] 2026-01-10 18:43:04,790 | INFO     | did not find any defunct processes belonging to 12207
[2026-01-10 19:43:40] 2026-01-10 18:43:04,792 | INFO     | did not find any defunct processes belonging to 12207
[2026-01-10 19:43:40] 2026-01-10 18:43:04,792 | INFO     | ready for new job
[2026-01-10 19:43:40] 2026-01-10 18:43:04,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:43:40] 2026-01-10 18:43:04,794 | INFO     | ***************************************
[2026-01-10 19:43:40] 2026-01-10 18:43:04,794 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:43:40] 2026-01-10 18:43:04,794 | INFO     | ***************************************
[2026-01-10 19:43:40] 2026-01-10 18:43:04,795 | INFO     | 
[2026-01-10 19:43:40] 2026-01-10 18:43:04,795 | INFO     | pilot is running in a VM
[2026-01-10 19:43:40] 2026-01-10 18:43:04,795 | INFO     | architecture information:
[2026-01-10 19:43:40] 2026-01-10 18:43:04,802 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:43:40] 2026-01-10 18:43:05,045 | INFO     | cat /etc/os-release:
[2026-01-10 19:43:40] NAME="CentOS Linux"
[2026-01-10 19:43:40] VERSION="7 (Core)"
[2026-01-10 19:43:40] ID="centos"
[2026-01-10 19:43:40] ID_LIKE="rhel fedora"
[2026-01-10 19:43:40] VERSION_ID="7"
[2026-01-10 19:43:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:43:40] ANSI_COLOR="0;31"
[2026-01-10 19:43:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:43:40] HOME_URL="https://www.centos.org/"
[2026-01-10 19:43:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:43:40] 
[2026-01-10 19:43:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:43:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:43:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:43:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:43:40] 
[2026-01-10 19:43:40] 2026-01-10 18:43:05,046 | INFO     | ***************************************
[2026-01-10 19:43:40] 2026-01-10 18:43:05,549 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 19:43:40] 2026-01-10 18:43:05,853 | INFO     | sufficient remaining disk space (497689821184 B)
[2026-01-10 19:43:40] 2026-01-10 18:43:05,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:43:40] 2026-01-10 18:43:05,853 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:43:40] 2026-01-10 18:43:05,853 | INFO     | update_server=False
[2026-01-10 19:43:40] 2026-01-10 18:43:05,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:43:40] 2026-01-10 18:43:05,861 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:43:40] 2026-01-10 18:43:05,939 | INFO     | all data control threads have been joined
[2026-01-10 19:43:40] 2026-01-10 18:43:06,165 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:43:40] 2026-01-10 18:43:06,165 | INFO     | aborting loop
[2026-01-10 19:43:40] 2026-01-10 18:43:06,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:43:40] 2026-01-10 18:43:06,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:43:40] 2026-01-10 18:43:06,841 | INFO     | all payload control threads have been joined
[2026-01-10 19:43:40] 2026-01-10 18:43:06,859 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:06,945 | INFO     | [data] control thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,170 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,417 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,492 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,513 | INFO     | [job] validate thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,521 | INFO     | all job control threads have been joined
[2026-01-10 19:43:40] 2026-01-10 18:43:07,828 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:07,847 | INFO     | [payload] control thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,187 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,202 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,234 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,352 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,379 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:08,527 | INFO     | [job] control thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:09,870 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:43:40] 2026-01-10 18:43:18,441 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:43:40] 2026-01-10 18:43:20,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273157760832)>', '<ExcThread(monitor, started 140272423925504)>']
[2026-01-10 19:43:40] 2026-01-10 18:43:25,046 | INFO     | all workflow threads have been joined
[2026-01-10 19:43:40] 2026-01-10 18:43:25,046 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:43:40] 2026-01-10 18:43:25,047 | INFO     | traces error code: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:25,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:43:40] 2026-01-10 18:43:35,454 | INFO     | PID=5739 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 19:43:40] 2026-01-10 18:43:35,454 | INFO     | .. there are 2 such processes running
[2026-01-10 19:43:40] 2026-01-10 18:43:35,454 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:43:40] 2026-01-10 18:43:35,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:43:40] 2026-01-10 18:43:35,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:43:40] 2026-01-10 18:43:35,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:43:40] 2026-01-10 18:43:35,455 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 19:43:40] 2026-01-10 18:43:35,455 | INFO     | [monitor] control thread has ended
[2026-01-10 19:43:40] 2026-01-10 18:43:35,822 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:43:40] 2026-01-10 18:43:35,956 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:43:40] 2026-01-10 18:43:36,065 [wrapper] pilotpid: 5739
[2026-01-10 19:43:40] 2026-01-10 18:43:36,121 [wrapper] Pilot exit status: 0
[2026-01-10 19:43:40] 2026-01-10 18:43:36,656 [wrapper] pandaids: 6965383331
[2026-01-10 19:43:40] 2026-01-10 18:43:37,631 [wrapper] cleanup supervisor_pilot 24120 5740
[2026-01-10 19:43:40] 2026-01-10 18:43:37,744 [wrapper] Test setup, not cleaning
[2026-01-10 19:43:40] 2026-01-10 18:43:37,825 [wrapper] apfmon messages muted
[2026-01-10 19:43:40] 2026-01-10 18:43:37,930 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:43:40] 2026-01-10 18:43:38,062 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:43:40]  *** Error codes and diagnostics ***
[2026-01-10 19:43:40]     "exeErrorCode": 0,
[2026-01-10 19:43:40]     "exeErrorDiag": "",
[2026-01-10 19:43:40]     "pilotErrorCode": 0,
[2026-01-10 19:43:40]     "pilotErrorDiag": "",
[2026-01-10 19:43:40]  *** Listing of results directory ***
[2026-01-10 19:43:40] total 445500
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc    579449 Jan 10 14:09 pilot3.tar.gz
[2026-01-10 19:43:40] -rwx------. 1 boinc boinc     36322 Jan 10 14:13 runpilot2-wrapper.sh
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc      5112 Jan 10 14:13 queuedata.json
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc       100 Jan 10 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:43:40] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 14:13 run_atlas
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc       105 Jan 10 14:13 job.xml
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc      6389 Jan 10 14:14 init_data.xml
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc 224020505 Jan 10 14:14 EVNT.47898824._001350.pool.root.1
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc     15847 Jan 10 14:14 start_atlas.sh
[2026-01-10 19:43:40] drwxrwx--x. 2 boinc boinc        68 Jan 10 14:14 shared
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc    592397 Jan 10 14:14 input.tar.gz
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc         0 Jan 10 14:14 boinc_lockfile
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc      2519 Jan 10 14:14 pandaJob.out
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc    989556 Jan 10 14:18 agis_schedconf.cvmfs.json
[2026-01-10 19:43:40] drwx------. 5 boinc boinc      4096 Jan 10 14:18 pilot3
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc 222026541 Jan 10 19:39 HITS.47898826._040471.pool.root.1
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc       531 Jan 10 19:40 boinc_task_state.xml
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc      1021 Jan 10 19:41 memory_monitor_summary.json
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc   1516240 Jan 10 19:41 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc    535948 Jan 10 19:41 log.47898826._040471.job.log.tgz.1
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc        95 Jan 10 19:42 pilot_heartbeat.json
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc      7786 Jan 10 19:43 heartbeat.json
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc        28 Jan 10 19:43 wrapper_checkpoint.txt
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc      8192 Jan 10 19:43 boinc_mmap_file
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc       889 Jan 10 19:43 pilotlog.txt
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc   2585570 Jan 10 19:43 log.47898826._040471.job.log.1
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc       357 Jan 10 19:43 output.list
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc       620 Jan 10 19:43 runtime_log
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc   3143680 Jan 10 19:43 result.tar.gz
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc       657 Jan 10 19:43 YvmLDmFxny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqWhKDmv0kyYn.diag
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc      8817 Jan 10 19:43 runtime_log.err
[2026-01-10 19:43:40] -rw-r--r--. 1 boinc boinc     20611 Jan 10 19:43 stderr.txt
[2026-01-10 19:43:40] HITS file was successfully produced:
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc 222026541 Jan 10 19:39 shared/HITS.pool.root.1
[2026-01-10 19:43:40]  *** Contents of shared directory: ***
[2026-01-10 19:43:40] total 439264
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc 224020505 Jan 10 14:14 ATLAS.root_0
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc     15847 Jan 10 14:14 start_atlas.sh
[2026-01-10 19:43:40] -rw-r--r--. 2 boinc boinc    592397 Jan 10 14:14 input.tar.gz
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc 222026541 Jan 10 19:39 HITS.pool.root.1
[2026-01-10 19:43:40] -rw-------. 1 boinc boinc   3143680 Jan 10 19:43 result.tar.gz
19:43:42 (1772): run_atlas exited; CPU time 80408.517040
19:43:42 (1772): called boinc_finish(0)

</stderr_txt>
]]>

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