Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:37:25 (2676692): wrapper (7.7.26015): starting
09:37:25 (2676692): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:37:25] Arguments: --nthreads 8
[2026-01-10 09:37:25] Threads: 8
[2026-01-10 09:37:25] Checking for CVMFS
[2026-01-10 09:37:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:37:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:37:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:37:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:37:26] 2.13.3.0 6658 22703 240164 154982 2 129 35703085 40960001 11650 16776704 0 23281794 99.717 20211339 45740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 09:37:26] CVMFS is ok
[2026-01-10 09:37:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:37:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:37:26] Further information can be found at the LHC@home message board.
[2026-01-10 09:37:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:37:26] Checking for apptainer binary...
[2026-01-10 09:37:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:37:27] Running /usr/bin/apptainer --version
[2026-01-10 09:37:27] apptainer version 1.4.5-2.el9
[2026-01-10 09:37:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:37:27] c-206-38.aglt2.org
[2026-01-10 09:37:27] apptainer works
[2026-01-10 09:37:27] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:37:27] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:37:28] Starting ATLAS job with PandaID=6965383350
[2026-01-10 09:37:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:43:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:43:24] 2026-01-10 19:42:46,561 | INFO     | executing command: lscpu
[2026-01-10 14:43:24] 2026-01-10 19:42:46,608 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 14:43:24] 2026-01-10 19:42:48,565 | INFO     | time since job start (18302s) is within the limit (349056.0s)
[2026-01-10 14:43:24] 2026-01-10 19:42:49,519 | WARNING  | process 2687148 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 14:43:24] 2026-01-10 19:42:49,519 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383350/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:43:24] 2026-01-10 19:42:49,929 | INFO     | number of running child processes to parent process 2687148: 1
[2026-01-10 14:43:24] 2026-01-10 19:42:49,929 | INFO     | maximum number of monitored processes: 6
[2026-01-10 14:43:24] 2026-01-10 19:42:50,026 | INFO     | PID=2680388 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,026 | INFO     | .. there are 9 such processes running
[2026-01-10 14:43:24] 2026-01-10 19:42:50,562 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 14:43:24] 2026-01-10 19:42:50,566 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3288.923187499999
[2026-01-10 14:43:24] 2026-01-10 19:42:50,575 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383350/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,576 | INFO     | extracted standard info from prmon json
[2026-01-10 14:43:24] 2026-01-10 19:42:50,576 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:43:24] 2026-01-10 19:42:50,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:43:24] 2026-01-10 19:42:50,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:43:24] 2026-01-10 19:42:50,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:43:24] 2026-01-10 19:42:50,580 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:43:24] 2026-01-10 19:42:50,580 | INFO     | sum of square deviations: 8288334075.518407
[2026-01-10 14:43:24] 2026-01-10 19:42:50,582 | INFO     | sum of deviations: 29183751032.745827
[2026-01-10 14:43:24] 2026-01-10 19:42:50,582 | INFO     | mean x: 1768065011.3444817
[2026-01-10 14:43:24] 2026-01-10 19:42:50,582 | INFO     | mean y: 2537808.8762541804
[2026-01-10 14:43:24] 2026-01-10 19:42:50,582 | INFO     | intersect: -6222931462.831276
[2026-01-10 14:43:24] 2026-01-10 19:42:50,583 | INFO     | chi2: 2.2984575025005762
[2026-01-10 14:43:24] 2026-01-10 19:42:50,583 | INFO     | sum of square deviations: 7879455497.414963
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | sum of deviations: 28455178705.5374
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | mean x: 1768064858.8503401
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | mean y: 2537537.1258503404
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | intersect: -6382497766.147674
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | chi2: 2.299203981550794
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | current chi2=2.299203981550794 (change=-0.032477391877183195 %)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,585 | INFO     | right removable region: 293
[2026-01-10 14:43:24] 2026-01-10 19:42:50,586 | INFO     | sum of square deviations: 7879392667.414963
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | sum of deviations: -30936169870.108833
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | mean x: 1768065163.8503401
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | mean y: 2560095.088435374
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | intersect: 6944359616.832633
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | chi2: 0.298444978326481
[2026-01-10 14:43:24] 2026-01-10 19:42:50,588 | INFO     | current chi2=0.298444978326481 (change=87.01542325660614 %)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,589 | INFO     | sum of square deviations: 7484143868.000007
[2026-01-10 14:43:24] 2026-01-10 19:42:50,590 | INFO     | sum of deviations: -26026062021.94118
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | mean x: 1768065316.3529413
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | mean y: 2558178.2837370243
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | intersect: 6150993910.391268
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | chi2: 0.27909724105897155
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | current chi2=0.27909724105897155 (change=6.482848991462729 %)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | left removable region: 20
[2026-01-10 14:43:24] 2026-01-10 19:42:50,591 | INFO     | sum of square deviations: 6308550889.890146
[2026-01-10 14:43:24] 2026-01-10 19:42:50,593 | INFO     | sum of deviations: 1947301030.1868165
[2026-01-10 14:43:24] 2026-01-10 19:42:50,593 | INFO     | mean x: 1768065438.3736265
[2026-01-10 14:43:24] 2026-01-10 19:42:50,593 | INFO     | mean y: 2546492.4981684983
[2026-01-10 14:43:24] 2026-01-10 19:42:50,593 | INFO     | intersect: -543213652.6882995
[2026-01-10 14:43:24] 2026-01-10 19:42:50,593 | INFO     | chi2: 0.13594431482274086
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | current memory leak: 0.31 B/s (using 273 data points, chi2=0.14)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | could have reported an average CPU frequency of 3290 MHz (13 samples)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | ..............................
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . Timing measurements:
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . get job = 0 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . initial setup = 2 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . payload setup = 19 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . stage-in = 0 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . payload execution = 18254 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . stage-out = 2 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | . log creation = 0 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,594 | INFO     | ..............................
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | job summary report
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | --------------------------------------------------
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | PanDA job id: 6965383350
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | task id: 47898826
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | errors: (none)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,666 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | pilot state: finished 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | transexitcode: 0
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | exeerrorcode: 0
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | exeerrordiag: 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | exitcode: 0
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | exitmsg: OK
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | cpuconsumptiontime: 45066 s
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | nevents: 400
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | neventsw: 0
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | pid: 2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | pgrp: 2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | corecount: 8
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | event service: False
[2026-01-10 14:43:24] 2026-01-10 19:42:50,667 | INFO     | sizes: {0: 2283693, 1: 2283948, 9: 2284210, 12: 2284238, 18277: 2316700, 18279: 2325698, 18280: 2325882, 18284: 2326076}
[2026-01-10 14:43:24] 2026-01-10 19:42:50,668 | INFO     | --------------------------------------------------
[2026-01-10 14:43:24] 2026-01-10 19:42:50,668 | INFO     | 
[2026-01-10 14:43:24] 2026-01-10 19:42:50,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 14:43:24] 2026-01-10 19:42:50,685 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,685 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | job 6965383350 has completed (purged errors)
[2026-01-10 14:43:24] 2026-01-10 19:42:50,687 | INFO     | overall cleanup function is called
[2026-01-10 14:43:24] 2026-01-10 19:42:51,696 | INFO     | --- collectZombieJob: --- 10, [2687148]
[2026-01-10 14:43:24] 2026-01-10 19:42:51,696 | INFO     | zombie collector waiting for pid 2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:51,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:43:24] 2026-01-10 19:42:51,696 | INFO     | collected zombie processes
[2026-01-10 14:43:24] 2026-01-10 19:42:51,696 | INFO     | will attempt to kill all subprocesses of pid=2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:51,900 | INFO     | process IDs to be killed: [2687148] (in reverse order)
[2026-01-10 14:43:24] 2026-01-10 19:42:51,993 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:43:24] 2026-01-10 19:42:51,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:43:24] 2026-01-10 19:42:52,003 | INFO     | did not find any defunct processes belonging to 2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:52,010 | INFO     | did not find any defunct processes belonging to 2687148
[2026-01-10 14:43:24] 2026-01-10 19:42:52,010 | INFO     | ready for new job
[2026-01-10 14:43:24] 2026-01-10 19:42:52,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:43:24] 2026-01-10 19:42:52,012 | INFO     | ***************************************
[2026-01-10 14:43:24] 2026-01-10 19:42:52,012 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:43:24] 2026-01-10 19:42:52,012 | INFO     | ***************************************
[2026-01-10 14:43:24] 2026-01-10 19:42:52,012 | INFO     | 
[2026-01-10 14:43:24] 2026-01-10 19:42:52,015 | INFO     | architecture information:
[2026-01-10 14:43:24] 2026-01-10 19:42:52,016 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:43:24] 2026-01-10 19:42:52,035 | INFO     | cat /etc/os-release:
[2026-01-10 14:43:24] NAME="CentOS Linux"
[2026-01-10 14:43:24] VERSION="7 (Core)"
[2026-01-10 14:43:24] ID="centos"
[2026-01-10 14:43:24] ID_LIKE="rhel fedora"
[2026-01-10 14:43:24] VERSION_ID="7"
[2026-01-10 14:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:43:24] ANSI_COLOR="0;31"
[2026-01-10 14:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:43:24] HOME_URL="https://www.centos.org/"
[2026-01-10 14:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:43:24] 
[2026-01-10 14:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:43:24] 
[2026-01-10 14:43:24] 2026-01-10 19:42:52,036 | INFO     | ***************************************
[2026-01-10 14:43:24] 2026-01-10 19:42:52,538 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 14:43:24] 2026-01-10 19:42:52,559 | INFO     | sufficient remaining disk space (86427828224 B)
[2026-01-10 14:43:24] 2026-01-10 19:42:52,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:43:24] 2026-01-10 19:42:52,560 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:43:24] 2026-01-10 19:42:52,560 | INFO     | update_server=False
[2026-01-10 14:43:24] 2026-01-10 19:42:52,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:43:24] 2026-01-10 19:42:52,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:43:24] 2026-01-10 19:42:52,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:43:24] 2026-01-10 19:42:52,846 | INFO     | all payload control threads have been joined
[2026-01-10 14:43:24] 2026-01-10 19:42:53,035 | INFO     | all data control threads have been joined
[2026-01-10 14:43:24] 2026-01-10 19:42:53,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:43:24] 2026-01-10 19:42:53,440 | INFO     | aborting loop
[2026-01-10 14:43:24] 2026-01-10 19:42:53,566 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:53,568 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:53,845 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:53,850 | INFO     | all job control threads have been joined
[2026-01-10 14:43:24] 2026-01-10 19:42:53,852 | INFO     | [payload] control thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:53,986 | INFO     | [job] validate thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:43:24] 2026-01-10 19:42:54,042 | INFO     | [data] control thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,152 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,190 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,318 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,445 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,718 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,723 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,856 | INFO     | [job] control thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:54,980 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:56,026 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:42:56,568 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:43:24] 2026-01-10 19:43:17,534 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:43:24] 2026-01-10 19:43:19,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891907897152)>', '<ExcThread(monitor, started 139891539158784)>']
[2026-01-10 14:43:24] 2026-01-10 19:43:22,365 | INFO     | PID=2680388 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:43:24] 2026-01-10 19:43:22,365 | INFO     | .. there are 9 such processes running
[2026-01-10 14:43:24] 2026-01-10 19:43:22,366 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:43:24] 2026-01-10 19:43:22,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:43:24] 2026-01-10 19:43:22,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:43:24] 2026-01-10 19:43:22,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:43:24] 2026-01-10 19:43:22,366 | INFO     | [monitor] control thread has ended
[2026-01-10 14:43:24] 2026-01-10 19:43:24,636 | INFO     | all workflow threads have been joined
[2026-01-10 14:43:24] 2026-01-10 19:43:24,637 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:43:24] 2026-01-10 19:43:24,637 | INFO     | traces error code: 0
[2026-01-10 14:43:24] 2026-01-10 19:43:24,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:43:24] 2026-01-10 19:43:24,757 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:43:24] 2026-01-10 19:43:24,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:43:24] 2026-01-10 19:43:24,767 [wrapper] pilotpid: 2680388
[2026-01-10 14:43:24] 2026-01-10 19:43:24,769 [wrapper] Pilot exit status: 0
[2026-01-10 14:43:24] 2026-01-10 19:43:24,786 [wrapper] pandaids: 6965383350
[2026-01-10 14:43:24] 2026-01-10 19:43:24,852 [wrapper] cleanup supervisor_pilot 3174576 2680389
[2026-01-10 14:43:24] 2026-01-10 19:43:24,855 [wrapper] Test setup, not cleaning
[2026-01-10 14:43:24] 2026-01-10 19:43:24,858 [wrapper] apfmon messages muted
[2026-01-10 14:43:24] 2026-01-10 19:43:24,862 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:43:24] 2026-01-10 19:43:24,866 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:43:24]  *** Error codes and diagnostics ***
[2026-01-10 14:43:24]     "exeErrorCode": 0,
[2026-01-10 14:43:24]     "exeErrorDiag": "",
[2026-01-10 14:43:24]     "pilotErrorCode": 0,
[2026-01-10 14:43:24]     "pilotErrorDiag": "",
[2026-01-10 14:43:24]  *** Listing of results directory ***
[2026-01-10 14:43:24] total 440380
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 14:43:24] -rwx------. 1 boincer umatlas     36322 Jan 10 08:13 runpilot2-wrapper.sh
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:43:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:37 run_atlas
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:37 job.xml
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas 225275399 Jan 10 09:37 EVNT.47898824._001377.pool.root.1
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:37 start_atlas.sh
[2026-01-10 14:43:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:37 shared
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 09:37 input.tar.gz
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:37 boinc_lockfile
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 09:37 pandaJob.out
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas        57 Jan 10 09:37 setup.sh.local
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas    989556 Jan 10 09:37 agis_schedconf.cvmfs.json
[2026-01-10 14:43:24] drwx------. 5 boincer umatlas      4096 Jan 10 09:37 pilot3
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas      6906 Jan 10 14:39 init_data.xml
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas 215881632 Jan 10 14:42 HITS.47898826._040490.pool.root.1
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas       531 Jan 10 14:42 boinc_task_state.xml
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas        95 Jan 10 14:42 pilot_heartbeat.json
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas      1032 Jan 10 14:42 memory_monitor_summary.json
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas    506900 Jan 10 14:42 log.47898826._040490.job.log.tgz.1
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas      7777 Jan 10 14:42 heartbeat.json
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:43 boinc_mmap_file
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas        28 Jan 10 14:43 wrapper_checkpoint.txt
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas      4823 Jan 10 14:43 pilotlog.txt
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas   2429137 Jan 10 14:43 log.47898826._040490.job.log.1
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas       357 Jan 10 14:43 output.list
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:43 runtime_log
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas   2959360 Jan 10 14:43 result.tar.gz
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas      9343 Jan 10 14:43 runtime_log.err
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas       656 Jan 10 14:43 OwtLDmFxny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvWhKDmqDIU5m.diag
[2026-01-10 14:43:24] -rw-r--r--. 1 boincer umatlas     21545 Jan 10 14:43 stderr.txt
[2026-01-10 14:43:24] HITS file was successfully produced:
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas 215881632 Jan 10 14:42 shared/HITS.pool.root.1
[2026-01-10 14:43:24]  *** Contents of shared directory: ***
[2026-01-10 14:43:24] total 434312
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas 225275399 Jan 10 09:37 ATLAS.root_0
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:37 start_atlas.sh
[2026-01-10 14:43:24] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 09:37 input.tar.gz
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas 215881632 Jan 10 14:42 HITS.pool.root.1
[2026-01-10 14:43:24] -rw-------. 1 boincer umatlas   2959360 Jan 10 14:43 result.tar.gz
14:43:26 (2676692): run_atlas exited; CPU time 45231.339693
14:43:26 (2676692): called boinc_finish(0)

</stderr_txt>
]]>

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