Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:33:41 (2073909): wrapper (7.7.26015): starting
09:33:41 (2073909): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 09:33:41] Arguments: --nthreads 11
[2026-01-10 09:33:41] Threads: 11
[2026-01-10 09:33:41] Checking for CVMFS
[2026-01-10 09:33:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:33:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:33:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:33:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:33:41] 2.13.3.0 12275 94973 359200 154982 2 159 26402971 40960001 7995 16776704 25 438744653 99.627 433439563 37154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 09:33:41] CVMFS is ok
[2026-01-10 09:33:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 09:33:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 09:33:41] Further information can be found at the LHC@home message board.
[2026-01-10 09:33:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:33:41] Checking for apptainer binary...
[2026-01-10 09:33:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:33:41] Running /usr/bin/apptainer --version
[2026-01-10 09:33:41] apptainer version 1.4.5-2.el9
[2026-01-10 09:33:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:33:42] c7-11-11.aglt2.org
[2026-01-10 09:33:42] apptainer works
[2026-01-10 09:33:42] Set ATHENA_PROC_NUMBER=11
[2026-01-10 09:33:42] Set ATHENA_CORE_NUMBER=11
[2026-01-10 09:33:42] Starting ATLAS job with PandaID=6965384194
[2026-01-10 09:33:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 10:20:04]  *** The last 200 lines of the pilot log: ***
[2026-01-10 10:20:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6965384194/log.47962010._002335.job.log.tgz.1
[2026-01-10 10:20:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f0/60/log.47962010._002335.job.log.tgz.1
[2026-01-10 10:20:04]  workdir=None
[2026-01-10 10:20:04] ]
[2026-01-10 10:20:04] 2026-01-10 15:19:18,700 | INFO     | transferring file log.47962010._002335.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6965384194/log.47962010._002335.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 10:20:04] 2026-01-10 15:19:18,700 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6965384194/log.47962010._002335.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002335.job
[2026-01-10 10:20:04] 2026-01-10 15:19:18,715 | INFO     | adding to output.list: log.47962010._002335.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/f0/60/log.47962010._002335.job.log.tgz.
[2026-01-10 10:20:04] 2026-01-10 15:19:18,716 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 10:20:04] 2026-01-10 15:19:18,716 | INFO     | summary of transferred files:
[2026-01-10 10:20:04] 2026-01-10 15:19:18,716 | INFO     |  -- lfn=log.47962010._002335.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 10:20:04] 2026-01-10 15:19:18,716 | INFO     | stage-out finished correctly
[2026-01-10 10:20:04] 2026-01-10 15:19:18,786 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 10:20:04] 2026-01-10 15:19:19,786 | INFO     | time since job start (2726s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | job 6965384194 has state=finished
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | preparing for final server update for job 6965384194 in state='finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | this job has now completed (state=finished)
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | log transfer has been attempted: DONE
[2026-01-10 10:20:04] 2026-01-10 15:19:19,804 | INFO     | job 6965384194 has finished - writing final server update
[2026-01-10 10:20:04] 2026-01-10 15:19:19,805 | INFO     | total number of processed events: 50 (read)
[2026-01-10 10:20:04] 2026-01-10 15:19:19,816 | INFO     | executing command: lscpu
[2026-01-10 10:20:04] 2026-01-10 15:19:19,871 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 10:20:04] 2026-01-10 15:19:20,307 | INFO     | monitor loop #186: job 0:6965384194 is in state 'finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:20,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:20:04] 2026-01-10 15:19:21,798 | INFO     | time since job start (2728s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:22,811 | INFO     | monitor loop #187: job 0:6965384194 is in state 'finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:22,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:20:04] 2026-01-10 15:19:23,803 | INFO     | time since job start (2730s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:25,226 | INFO     | PID=2077956 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:20:04] 2026-01-10 15:19:25,227 | INFO     | .. there are 10 such processes running
[2026-01-10 10:20:04] 2026-01-10 15:19:25,314 | INFO     | monitor loop #188: job 0:6965384194 is in state 'finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:25,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:20:04] 2026-01-10 15:19:26,227 | INFO     | time since job start (2733s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:27,826 | INFO     | monitor loop #189: job 0:6965384194 is in state 'finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:27,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:20:04] 2026-01-10 15:19:28,236 | INFO     | time since job start (2735s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:30,242 | INFO     | time since job start (2737s) is within the limit (349056.0s)
[2026-01-10 10:20:04] 2026-01-10 15:19:30,329 | INFO     | monitor loop #190: job 0:6965384194 is in state 'finished'
[2026-01-10 10:20:04] 2026-01-10 15:19:30,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 10:20:04] 2026-01-10 15:19:30,882 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 10:20:04] 2026-01-10 15:19:30,885 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3277.21084375
[2026-01-10 10:20:04] 2026-01-10 15:19:30,965 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965384194/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 10:20:04] 2026-01-10 15:19:30,966 | INFO     | extracted standard info from prmon json
[2026-01-10 10:20:04] 2026-01-10 15:19:30,966 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 10:20:04] 2026-01-10 15:19:30,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 10:20:04] 2026-01-10 15:19:30,967 | INFO     | fitting pss+swap vs Time
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | sum of square deviations: 17005622.763157893
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | sum of deviations: -2932858351.6052628
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | mean x: 1768057095.0789473
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | mean y: 2973648.8684210526
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | intersect: 304929237722.6168
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | chi2: 0.3344799283235692
[2026-01-10 10:20:04] 2026-01-10 15:19:31,002 | INFO     | current memory leak: -172.46 B/s (using 38 data points, chi2=0.33)
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | could have reported an average CPU frequency of 3286 MHz (5 samples)
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | ..............................
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . Timing measurements:
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . get job = 0 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . initial setup = 2 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . payload setup = 5 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . stage-in = 0 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . payload execution = 2699 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . stage-out = 1 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | . log creation = 0 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,003 | INFO     | ..............................
[2026-01-10 10:20:04] 2026-01-10 15:19:31,114 | INFO     | 
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | job summary report
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | --------------------------------------------------
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | PanDA job id: 6965384194
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | task id: 47962010
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | errors: (none)
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | pilot state: finished 
[2026-01-10 10:20:04] 2026-01-10 15:19:31,115 | INFO     | transexitcode: 0
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | exeerrorcode: 0
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | exeerrordiag: 
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | exitcode: 0
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | exitmsg: OK
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | cpuconsumptiontime: 11131 s
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | nevents: 50
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | neventsw: 0
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | pid: 2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | pgrp: 2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | corecount: 11
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | event service: False
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | sizes: {0: 2284396, 1: 2284595, 5: 2284857, 11: 2284913, 2709: 2310963, 2711: 2320141, 2723: 2320363}
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | --------------------------------------------------
[2026-01-10 10:20:04] 2026-01-10 15:19:31,116 | INFO     | 
[2026-01-10 10:20:04] 2026-01-10 15:19:31,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,149 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 10:20:04] 2026-01-10 15:19:31,150 | INFO     | job 6965384194 has completed (purged errors)
[2026-01-10 10:20:04] 2026-01-10 15:19:31,150 | INFO     | overall cleanup function is called
[2026-01-10 10:20:04] 2026-01-10 15:19:32,167 | INFO     | --- collectZombieJob: --- 10, [2085865]
[2026-01-10 10:20:04] 2026-01-10 15:19:32,167 | INFO     | zombie collector waiting for pid 2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:32,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 10:20:04] 2026-01-10 15:19:32,167 | INFO     | collected zombie processes
[2026-01-10 10:20:04] 2026-01-10 15:19:32,167 | INFO     | will attempt to kill all subprocesses of pid=2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:32,840 | INFO     | process IDs to be killed: [2085865] (in reverse order)
[2026-01-10 10:20:04] 2026-01-10 15:19:33,050 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 10:20:04] 2026-01-10 15:19:33,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 10:20:04] 2026-01-10 15:19:33,065 | INFO     | did not find any defunct processes belonging to 2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:33,078 | INFO     | did not find any defunct processes belonging to 2085865
[2026-01-10 10:20:04] 2026-01-10 15:19:33,078 | INFO     | ready for new job
[2026-01-10 10:20:04] 2026-01-10 15:19:33,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 10:20:04] 2026-01-10 15:19:33,085 | INFO     | ***************************************
[2026-01-10 10:20:04] 2026-01-10 15:19:33,085 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 10:20:04] 2026-01-10 15:19:33,085 | INFO     | ***************************************
[2026-01-10 10:20:04] 2026-01-10 15:19:33,085 | INFO     | 
[2026-01-10 10:20:04] 2026-01-10 15:19:33,113 | INFO     | architecture information:
[2026-01-10 10:20:04] 2026-01-10 15:19:33,136 | INFO     | executing command: cat /etc/os-release
[2026-01-10 10:20:04] 2026-01-10 15:19:33,184 | INFO     | cat /etc/os-release:
[2026-01-10 10:20:04] NAME="CentOS Linux"
[2026-01-10 10:20:04] VERSION="7 (Core)"
[2026-01-10 10:20:04] ID="centos"
[2026-01-10 10:20:04] ID_LIKE="rhel fedora"
[2026-01-10 10:20:04] VERSION_ID="7"
[2026-01-10 10:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 10:20:04] ANSI_COLOR="0;31"
[2026-01-10 10:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 10:20:04] HOME_URL="https://www.centos.org/"
[2026-01-10 10:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 10:20:04] 
[2026-01-10 10:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 10:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 10:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 10:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 10:20:04] 
[2026-01-10 10:20:04] 2026-01-10 15:19:33,184 | INFO     | ***************************************
[2026-01-10 10:20:04] 2026-01-10 15:19:33,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 10:20:04] 2026-01-10 15:19:33,841 | INFO     | sufficient remaining disk space (84786806784 B)
[2026-01-10 10:20:04] 2026-01-10 15:19:33,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 10:20:04] 2026-01-10 15:19:33,841 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 10:20:04] 2026-01-10 15:19:33,842 | INFO     | update_server=False
[2026-01-10 10:20:04] 2026-01-10 15:19:33,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 10:20:04] 2026-01-10 15:19:33,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:20:04] 2026-01-10 15:19:33,844 | INFO     | aborting loop
[2026-01-10 10:20:04] 2026-01-10 15:19:33,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 10:20:04] 2026-01-10 15:19:33,924 | INFO     | all job control threads have been joined
[2026-01-10 10:20:04] 2026-01-10 15:19:34,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 10:20:04] 2026-01-10 15:19:34,653 | INFO     | all data control threads have been joined
[2026-01-10 10:20:04] 2026-01-10 15:19:34,848 | INFO     | [job] retrieve thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:34,850 | INFO     | [job] job monitor thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:34,930 | INFO     | [job] control thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:35,142 | INFO     | [data] copytool_in thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:35,376 | INFO     | all payload control threads have been joined
[2026-01-10 10:20:04] 2026-01-10 15:19:35,592 | INFO     | [job] validate thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:35,659 | INFO     | [data] control thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:35,740 | INFO     | [payload] failed_post thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,043 | INFO     | [payload] validate_post thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 10:20:04] 2026-01-10 15:19:36,140 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,289 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,301 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,318 | INFO     | [data] copytool_out thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:36,376 | INFO     | [payload] control thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:37,093 | INFO     | [job] queue monitor thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:37,907 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:44,121 | INFO     | job.realtimelogging is not enabled
[2026-01-10 10:20:04] 2026-01-10 15:19:45,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 10:20:04] 2026-01-10 15:19:57,285 | INFO     | [monitor] cgroup control has ended
[2026-01-10 10:20:04] 2026-01-10 15:19:58,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624250783552)>', '<ExcThread(monitor, started 140623378106112)>']
[2026-01-10 10:20:04] 2026-01-10 15:20:03,514 | INFO     | all workflow threads have been joined
[2026-01-10 10:20:04] 2026-01-10 15:20:03,515 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 10:20:04] 2026-01-10 15:20:03,515 | INFO     | traces error code: 0
[2026-01-10 10:20:04] 2026-01-10 15:20:03,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 10:20:04] 2026-01-10 15:20:03,799 | INFO     | PID=2077956 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 10:20:04] 2026-01-10 15:20:03,800 | INFO     | .. there are 10 such processes running
[2026-01-10 10:20:04] 2026-01-10 15:20:03,801 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 10:20:04] 2026-01-10 15:20:03,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 10:20:04] 2026-01-10 15:20:03,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 10:20:04] 2026-01-10 15:20:03,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 10:20:04] 2026-01-10 15:20:03,801 | INFO     | [monitor] control thread has ended
[2026-01-10 10:20:04] 2026-01-10 15:20:04,034 [wrapper] ==== pilot stdout END ====
[2026-01-10 10:20:04] 2026-01-10 15:20:04,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 10:20:04] 2026-01-10 15:20:04,061 [wrapper] pilotpid: 2077956
[2026-01-10 10:20:04] 2026-01-10 15:20:04,075 [wrapper] Pilot exit status: 0
[2026-01-10 10:20:04] 2026-01-10 15:20:04,117 [wrapper] pandaids: 6965384194
[2026-01-10 10:20:04] 2026-01-10 15:20:04,297 [wrapper] cleanup supervisor_pilot 2330918 2077957
[2026-01-10 10:20:04] 2026-01-10 15:20:04,311 [wrapper] Test setup, not cleaning
[2026-01-10 10:20:04] 2026-01-10 15:20:04,317 [wrapper] apfmon messages muted
[2026-01-10 10:20:04] 2026-01-10 15:20:04,326 [wrapper] ==== wrapper stdout END ====
[2026-01-10 10:20:04] 2026-01-10 15:20:04,333 [wrapper] ==== wrapper stderr END ====
[2026-01-10 10:20:04]  *** Error codes and diagnostics ***
[2026-01-10 10:20:04]     "exeErrorCode": 0,
[2026-01-10 10:20:04]     "exeErrorDiag": "",
[2026-01-10 10:20:04]     "pilotErrorCode": 0,
[2026-01-10 10:20:04]     "pilotErrorDiag": "",
[2026-01-10 10:20:04]  *** Listing of results directory ***
[2026-01-10 10:20:04] total 431540
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 10:20:04] -rwx------. 1 boincer umatlas     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas       100 Jan 10 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 10:20:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 09:33 run_atlas
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas       105 Jan 10 09:33 job.xml
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas 392461642 Jan 10 09:33 EVNT.47962006._000093.pool.root.1
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:33 start_atlas.sh
[2026-01-10 10:20:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 09:33 shared
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 09:33 input.tar.gz
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas         0 Jan 10 09:33 boinc_lockfile
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas      2889 Jan 10 09:33 pandaJob.out
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas        57 Jan 10 09:33 setup.sh.local
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas    989556 Jan 10 09:33 agis_schedconf.cvmfs.json
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas   1516240 Jan 10 09:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 10:20:04] drwx------. 5 boincer umatlas      4096 Jan 10 09:33 pilot3
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas       529 Jan 10 10:12 boinc_task_state.xml
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas      6901 Jan 10 10:13 init_data.xml
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas  41730370 Jan 10 10:19 HITS.47962010._002335.pool.root.1
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas      1027 Jan 10 10:19 memory_monitor_summary.json
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas   1469074 Jan 10 10:19 log.47962010._002335.job.log.tgz.1
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas      8524 Jan 10 10:19 heartbeat.json
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas        27 Jan 10 10:19 wrapper_checkpoint.txt
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas        95 Jan 10 10:20 pilot_heartbeat.json
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas       823 Jan 10 10:20 pilotlog.txt
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 10:20 boinc_mmap_file
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas    422046 Jan 10 10:20 log.47962010._002335.job.log.1
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas       353 Jan 10 10:20 output.list
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas       620 Jan 10 10:20 runtime_log
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas   1914880 Jan 10 10:20 result.tar.gz
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 10:20 runtime_log.err
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas       653 Jan 10 10:20 2GQNDmHvny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMmmKDmCB7qYm.diag
[2026-01-10 10:20:04] -rw-r--r--. 1 boincer umatlas     22460 Jan 10 10:20 stderr.txt
[2026-01-10 10:20:04] HITS file was successfully produced:
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas 41730370 Jan 10 10:19 shared/HITS.pool.root.1
[2026-01-10 10:20:04]  *** Contents of shared directory: ***
[2026-01-10 10:20:04] total 426492
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas 392461642 Jan 10 09:33 ATLAS.root_0
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 09:33 start_atlas.sh
[2026-01-10 10:20:04] -rw-r--r--. 2 boincer umatlas    592616 Jan 10 09:33 input.tar.gz
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas  41730370 Jan 10 10:19 HITS.pool.root.1
[2026-01-10 10:20:04] -rw-------. 1 boincer umatlas   1914880 Jan 10 10:20 result.tar.gz
10:20:26 (2073909): run_atlas exited; CPU time 11099.636291
10:20:26 (2073909): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN