Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:45 (8877): wrapper (7.7.26015): starting
08:13:45 (8877): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:13:45] Arguments: --nthreads 8
[2026-01-10 08:13:45] Threads: 8
[2026-01-10 08:13:45] Checking for CVMFS
[2026-01-10 08:13:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:46] 2.11.2.0 21766 182544 140564 154980 1 1 17117521 18432001 1 130560 0 123312943 99.980 7008647 29810 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:13:46] CVMFS is ok
[2026-01-10 08:13:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:46] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:46] Checking for apptainer binary...
[2026-01-10 08:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:46] Running /usr/bin/apptainer --version
[2026-01-10 08:13:46] apptainer version 1.3.2-1.el7
[2026-01-10 08:13:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:47] c-206-18.aglt2.org
[2026-01-10 08:13:47] apptainer works
[2026-01-10 08:13:47] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:13:47] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:13:47] Starting ATLAS job with PandaID=6965382627
[2026-01-10 08:13:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:12:25]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:12:25] 2026-01-10 16:11:51,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 11:12:25] 2026-01-10 16:11:52,230 | INFO     | time since job start (10670s) is within the limit (349056.0s)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,315 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 11:12:25] 2026-01-10 16:11:53,328 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1734.625
[2026-01-10 11:12:25] 2026-01-10 16:11:53,332 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965382627/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,333 | INFO     | extracted standard info from prmon json
[2026-01-10 11:12:25] 2026-01-10 16:11:53,333 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:12:25] 2026-01-10 16:11:53,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:12:25] 2026-01-10 16:11:53,334 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:12:25] 2026-01-10 16:11:53,334 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:12:25] 2026-01-10 16:11:53,337 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:12:25] 2026-01-10 16:11:53,338 | INFO     | sum of square deviations: 1661798600.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,339 | INFO     | sum of deviations: -12856976221.999998
[2026-01-10 11:12:25] 2026-01-10 16:11:53,339 | INFO     | mean x: 1768056177.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,339 | INFO     | mean y: 2511218.8514285716
[2026-01-10 11:12:25] 2026-01-10 16:11:53,339 | INFO     | intersect: 13681579324.245922
[2026-01-10 11:12:25] 2026-01-10 16:11:53,339 | INFO     | chi2: 2.241548830461391
[2026-01-10 11:12:25] 2026-01-10 16:11:53,340 | INFO     | sum of square deviations: 1523386702.5
[2026-01-10 11:12:25] 2026-01-10 16:11:53,341 | INFO     | sum of deviations: -747549936.9999968
[2026-01-10 11:12:25] 2026-01-10 16:11:53,341 | INFO     | mean x: 1768056024.5
[2026-01-10 11:12:25] 2026-01-10 16:11:53,341 | INFO     | mean y: 2524266.4470588234
[2026-01-10 11:12:25] 2026-01-10 16:11:53,341 | INFO     | intersect: 870137307.5471334
[2026-01-10 11:12:25] 2026-01-10 16:11:53,342 | INFO     | chi2: 1.4761836932007684
[2026-01-10 11:12:25] 2026-01-10 16:11:53,342 | INFO     | current chi2=1.4761836932007684 (change=34.14447755318732 %)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,342 | INFO     | sum of square deviations: 1392881930.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,343 | INFO     | sum of deviations: -394245440.0000051
[2026-01-10 11:12:25] 2026-01-10 16:11:53,343 | INFO     | mean x: 1768055872.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,343 | INFO     | mean y: 2524679.521212121
[2026-01-10 11:12:25] 2026-01-10 16:11:53,343 | INFO     | intersect: 502960466.78225636
[2026-01-10 11:12:25] 2026-01-10 16:11:53,344 | INFO     | chi2: 1.4768282582288546
[2026-01-10 11:12:25] 2026-01-10 16:11:53,344 | INFO     | current chi2=1.4768282582288546 (change=-0.043664283182033616 %)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,344 | INFO     | right removable region: 164
[2026-01-10 11:12:25] 2026-01-10 16:11:53,344 | INFO     | sum of square deviations: 1523386702.5
[2026-01-10 11:12:25] 2026-01-10 16:11:53,345 | INFO     | sum of deviations: -38808718469.50001
[2026-01-10 11:12:25] 2026-01-10 16:11:53,345 | INFO     | mean x: 1768056329.5
[2026-01-10 11:12:25] 2026-01-10 16:11:53,346 | INFO     | mean y: 2539447.876470588
[2026-01-10 11:12:25] 2026-01-10 16:11:53,346 | INFO     | intersect: 45044287690.24899
[2026-01-10 11:12:25] 2026-01-10 16:11:53,346 | INFO     | chi2: 0.8498536602665541
[2026-01-10 11:12:25] 2026-01-10 16:11:53,346 | INFO     | current chi2=0.8498536602665541 (change=62.08631956986528 %)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,347 | INFO     | sum of square deviations: 1392881930.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,348 | INFO     | sum of deviations: -37208498424.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,348 | INFO     | mean x: 1768056482.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,348 | INFO     | mean y: 2537568.096969697
[2026-01-10 11:12:25] 2026-01-10 16:11:53,348 | INFO     | intersect: 47233193237.554886
[2026-01-10 11:12:25] 2026-01-10 16:11:53,348 | INFO     | chi2: 0.8486952161306976
[2026-01-10 11:12:25] 2026-01-10 16:11:53,349 | INFO     | current chi2=0.8486952161306976 (change=0.13631101329763942 %)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,349 | INFO     | left removable region: 20
[2026-01-10 11:12:25] 2026-01-10 16:11:53,349 | INFO     | sum of square deviations: 925859220.0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,350 | INFO     | sum of deviations: -19533982511.499992
[2026-01-10 11:12:25] 2026-01-10 16:11:53,350 | INFO     | mean x: 1768056451.5
[2026-01-10 11:12:25] 2026-01-10 16:11:53,350 | INFO     | mean y: 2547413.7569444445
[2026-01-10 11:12:25] 2026-01-10 16:11:53,350 | INFO     | intersect: 37305393307.483345
[2026-01-10 11:12:25] 2026-01-10 16:11:53,350 | INFO     | chi2: 0.05379062604368634
[2026-01-10 11:12:25] 2026-01-10 16:11:53,351 | INFO     | current memory leak: -21.10 B/s (using 144 data points, chi2=0.05)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,351 | INFO     | could have reported an average CPU frequency of 2053 MHz (9 samples)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,351 | INFO     | ..............................
[2026-01-10 11:12:25] 2026-01-10 16:11:53,351 | INFO     | . Timing measurements:
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . get job = 0 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . initial setup = 3 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . payload setup = 7 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . stage-in = 0 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . payload execution = 10634 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,352 | INFO     | . stage-out = 0 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,353 | INFO     | . log creation = 0 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,353 | INFO     | ..............................
[2026-01-10 11:12:25] 2026-01-10 16:11:53,470 | INFO     | PID=12571 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,805 | INFO     | 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,805 | INFO     | job summary report
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | --------------------------------------------------
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | PanDA job id: 6965382627
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | task id: 47898826
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | errors: (none)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,806 | INFO     | pilot state: finished 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | transexitcode: 0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | exeerrorcode: 0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | exeerrordiag: 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | exitcode: 0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | exitmsg: OK
[2026-01-10 11:12:25] 2026-01-10 16:11:53,807 | INFO     | cpuconsumptiontime: 81500 s
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | nevents: 400
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | neventsw: 0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | pid: 24703
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | pgrp: 24703
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | corecount: 8
[2026-01-10 11:12:25] 2026-01-10 16:11:53,808 | INFO     | event service: False
[2026-01-10 11:12:25] 2026-01-10 16:11:53,809 | INFO     | sizes: {0: 2283918, 5: 2284180, 11: 2284236, 10645: 2313241, 10646: 2313240, 10647: 2322294, 10648: 2322478, 10656: 2322736}
[2026-01-10 11:12:25] 2026-01-10 16:11:53,809 | INFO     | --------------------------------------------------
[2026-01-10 11:12:25] 2026-01-10 16:11:53,809 | INFO     | 
[2026-01-10 11:12:25] 2026-01-10 16:11:53,809 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 11:12:25] 2026-01-10 16:11:53,834 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,834 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,834 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,834 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,836 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,837 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:12:25] 2026-01-10 16:11:53,837 | INFO     | job 6965382627 has completed (purged errors)
[2026-01-10 11:12:25] 2026-01-10 16:11:53,837 | INFO     | overall cleanup function is called
[2026-01-10 11:12:25] 2026-01-10 16:11:54,845 | INFO     | --- collectZombieJob: --- 10, [24703]
[2026-01-10 11:12:25] 2026-01-10 16:11:54,845 | INFO     | zombie collector waiting for pid 24703
[2026-01-10 11:12:25] 2026-01-10 16:11:54,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:12:25] 2026-01-10 16:11:54,854 | INFO     | collected zombie processes
[2026-01-10 11:12:25] 2026-01-10 16:11:54,854 | INFO     | will attempt to kill all subprocesses of pid=24703
[2026-01-10 11:12:25] 2026-01-10 16:11:54,951 | INFO     | process IDs to be killed: [24703] (in reverse order)
[2026-01-10 11:12:25] 2026-01-10 16:11:55,004 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:12:25] 2026-01-10 16:11:55,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:12:25] 2026-01-10 16:11:55,007 | INFO     | did not find any defunct processes belonging to 24703
[2026-01-10 11:12:25] 2026-01-10 16:11:55,010 | INFO     | did not find any defunct processes belonging to 24703
[2026-01-10 11:12:25] 2026-01-10 16:11:55,010 | INFO     | ready for new job
[2026-01-10 11:12:25] 2026-01-10 16:11:55,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:12:25] 2026-01-10 16:11:55,012 | INFO     | ***************************************
[2026-01-10 11:12:25] 2026-01-10 16:11:55,012 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:12:25] 2026-01-10 16:11:55,012 | INFO     | ***************************************
[2026-01-10 11:12:25] 2026-01-10 16:11:55,012 | INFO     | 
[2026-01-10 11:12:25] 2026-01-10 16:11:55,013 | INFO     | architecture information:
[2026-01-10 11:12:25] 2026-01-10 16:11:55,013 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:12:25] 2026-01-10 16:11:55,028 | INFO     | cat /etc/os-release:
[2026-01-10 11:12:25] NAME="CentOS Linux"
[2026-01-10 11:12:25] VERSION="7 (Core)"
[2026-01-10 11:12:25] ID="centos"
[2026-01-10 11:12:25] ID_LIKE="rhel fedora"
[2026-01-10 11:12:25] VERSION_ID="7"
[2026-01-10 11:12:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:12:25] ANSI_COLOR="0;31"
[2026-01-10 11:12:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:12:25] HOME_URL="https://www.centos.org/"
[2026-01-10 11:12:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:12:25] 
[2026-01-10 11:12:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:12:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:12:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:12:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:12:25] 
[2026-01-10 11:12:25] 2026-01-10 16:11:55,029 | INFO     | ***************************************
[2026-01-10 11:12:25] 2026-01-10 16:11:55,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 11:12:25] 2026-01-10 16:11:55,548 | INFO     | sufficient remaining disk space (29432479744 B)
[2026-01-10 11:12:25] 2026-01-10 16:11:55,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:12:25] 2026-01-10 16:11:55,549 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:12:25] 2026-01-10 16:11:55,549 | INFO     | update_server=False
[2026-01-10 11:12:25] 2026-01-10 16:11:55,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:12:25] 2026-01-10 16:11:55,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:12:25] 2026-01-10 16:11:55,550 | INFO     | aborting loop
[2026-01-10 11:12:25] 2026-01-10 16:11:55,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:12:25] 2026-01-10 16:11:56,197 | INFO     | all job control threads have been joined
[2026-01-10 11:12:25] 2026-01-10 16:11:56,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:12:25] 2026-01-10 16:11:56,294 | INFO     | all data control threads have been joined
[2026-01-10 11:12:25] 2026-01-10 16:11:56,555 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:56,555 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:56,710 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,029 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,046 | INFO     | all payload control threads have been joined
[2026-01-10 11:12:25] 2026-01-10 16:11:57,147 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,203 | INFO     | [job] control thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,236 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,295 | INFO     | [data] control thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,586 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,707 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,802 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:57,897 | INFO     | [job] validate thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:58,049 | INFO     | [payload] control thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:11:58,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:12:25] 2026-01-10 16:11:59,452 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:12:00,223 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:12:25] 2026-01-10 16:12:17,536 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:12:25] 2026-01-10 16:12:18,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242617571136)>', '<ExcThread(monitor, started 140242308798208)>']
[2026-01-10 11:12:25] 2026-01-10 16:12:23,564 | INFO     | all workflow threads have been joined
[2026-01-10 11:12:25] 2026-01-10 16:12:23,565 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:12:25] 2026-01-10 16:12:23,565 | INFO     | traces error code: 0
[2026-01-10 11:12:25] 2026-01-10 16:12:23,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:12:25] 2026-01-10 16:12:25,653 | INFO     | PID=12571 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 11:12:25] 2026-01-10 16:12:25,653 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:12:25] 2026-01-10 16:12:25,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:12:25] 2026-01-10 16:12:25,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:12:25] 2026-01-10 16:12:25,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:12:25] 2026-01-10 16:12:25,654 | INFO     | [monitor] control thread has ended
[2026-01-10 11:12:25] 2026-01-10 16:12:25,742 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:12:25] 2026-01-10 16:12:25,746 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:12:25] 2026-01-10 16:12:25,750 [wrapper] pilotpid: 12571
[2026-01-10 11:12:25] 2026-01-10 16:12:25,754 [wrapper] Pilot exit status: 0
[2026-01-10 11:12:25] 2026-01-10 16:12:25,770 [wrapper] pandaids: 6965382627
[2026-01-10 11:12:25] 2026-01-10 16:12:25,813 [wrapper] cleanup supervisor_pilot 23057 12572
[2026-01-10 11:12:25] 2026-01-10 16:12:25,817 [wrapper] Test setup, not cleaning
[2026-01-10 11:12:25] 2026-01-10 16:12:25,821 [wrapper] apfmon messages muted
[2026-01-10 11:12:25] 2026-01-10 16:12:25,825 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:12:25] 2026-01-10 16:12:25,829 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:12:25]  *** Error codes and diagnostics ***
[2026-01-10 11:12:25]     "exeErrorCode": 0,
[2026-01-10 11:12:25]     "exeErrorDiag": "",
[2026-01-10 11:12:25]     "pilotErrorCode": 0,
[2026-01-10 11:12:25]     "pilotErrorDiag": "",
[2026-01-10 11:12:25]  *** Listing of results directory ***
[2026-01-10 11:12:25] total 436756
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 11:12:25] -rwx------ 1 boincer umatlas     36322 Jan 10 08:13 runpilot2-wrapper.sh
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:13 queuedata.json
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:12:25] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas 223737935 Jan 10 08:13 EVNT.47898824._000842.pool.root.1
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:12:25] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas    592402 Jan 10 08:13 input.tar.gz
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas      2518 Jan 10 08:13 pandaJob.out
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas        57 Jan 10 08:13 setup.sh.local
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas    989556 Jan 10 08:13 agis_schedconf.cvmfs.json
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas   1516240 Jan 10 08:14 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:12:25] drwx------ 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 11:01 init_data.xml
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas 215739958 Jan 10 11:11 HITS.47898826._040203.pool.root.1
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas       530 Jan 10 11:11 boinc_task_state.xml
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas      1051 Jan 10 11:11 memory_monitor_summary.json
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas    419755 Jan 10 11:11 log.47898826._040203.job.log.tgz.1
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas      7861 Jan 10 11:11 heartbeat.json
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas        95 Jan 10 11:12 pilot_heartbeat.json
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas       745 Jan 10 11:12 pilotlog.txt
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 11:12 boinc_mmap_file
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas        28 Jan 10 11:12 wrapper_checkpoint.txt
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas   1502753 Jan 10 11:12 log.47898826._040203.job.log.1
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas       357 Jan 10 11:12 output.list
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas       620 Jan 10 11:12 runtime_log
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas   1945600 Jan 10 11:12 result.tar.gz
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 11:12 runtime_log.err
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas       663 Jan 10 11:12 LX5NDmExny8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAWhKDmUUitzn.diag
[2026-01-10 11:12:25] -rw-r--r-- 1 boincer umatlas     21221 Jan 10 11:12 stderr.txt
[2026-01-10 11:12:25] HITS file was successfully produced:
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas 215739958 Jan 10 11:11 shared/HITS.pool.root.1
[2026-01-10 11:12:25]  *** Contents of shared directory: ***
[2026-01-10 11:12:25] total 431684
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas 223737935 Jan 10 08:13 ATLAS.root_0
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:12:25] -rw-r--r-- 2 boincer umatlas    592402 Jan 10 08:13 input.tar.gz
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas 215739958 Jan 10 11:11 HITS.pool.root.1
[2026-01-10 11:12:25] -rw------- 1 boincer umatlas   1945600 Jan 10 11:12 result.tar.gz
11:12:27 (8877): run_atlas exited; CPU time 81412.928861
11:12:27 (8877): called boinc_finish(0)

</stderr_txt>
]]>

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