Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:14:13 (2548774): wrapper (7.7.26015): starting
08:14:13 (2548774): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:14:13] Arguments: --nthreads 10
[2026-01-10 08:14:13] Threads: 10
[2026-01-10 08:14:13] Checking for CVMFS
[2026-01-10 08:14:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:14:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:14:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:14:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:14:14] 2.13.3.0 6658 22619 240108 154980 2 104 35596282 40960001 9941 16776704 0 23158612 99.716 20208649 45742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:14:14] CVMFS is ok
[2026-01-10 08:14:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:14:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:14:14] Further information can be found at the LHC@home message board.
[2026-01-10 08:14:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:14:14] Checking for apptainer binary...
[2026-01-10 08:14:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:14:14] Running /usr/bin/apptainer --version
[2026-01-10 08:14:14] apptainer version 1.4.5-2.el9
[2026-01-10 08:14:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:14:14] c-206-38.aglt2.org
[2026-01-10 08:14:14] apptainer works
[2026-01-10 08:14:14] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:14:14] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:14:14] Starting ATLAS job with PandaID=6965384103
[2026-01-10 08:14:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:47:00]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:47:00] 2026-01-10 14:46:00,538 | INFO     | job 6965384103 has finished - writing final server update
[2026-01-10 09:47:00] 2026-01-10 14:46:00,538 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:47:00] 2026-01-10 14:46:00,538 | INFO     | executing command: lscpu
[2026-01-10 09:47:00] 2026-01-10 14:46:00,583 | INFO     | monitor loop #375: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:00,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:00,683 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:47:00] 2026-01-10 14:46:02,005 | INFO     | PID=2554992 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:47:00] 2026-01-10 14:46:02,006 | INFO     | .. there are 11 such processes running
[2026-01-10 09:47:00] 2026-01-10 14:46:03,007 | INFO     | time since job start (5493s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:03,092 | INFO     | monitor loop #376: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:03,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:05,018 | INFO     | time since job start (5495s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:05,597 | INFO     | monitor loop #377: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:05,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:07,025 | INFO     | time since job start (5497s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:08,103 | INFO     | monitor loop #378: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:08,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:09,047 | INFO     | time since job start (5499s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:10,620 | INFO     | monitor loop #379: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:10,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:11,088 | INFO     | time since job start (5501s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:13,095 | INFO     | time since job start (5503s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:13,132 | INFO     | monitor loop #380: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:13,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:15,106 | INFO     | time since job start (5505s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:15,106 | INFO     | 5507s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 09:47:00] 2026-01-10 14:46:15,646 | INFO     | monitor loop #381: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:15,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:17,114 | INFO     | time since job start (5507s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:18,154 | INFO     | monitor loop #382: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:18,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:19,136 | INFO     | time since job start (5509s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:20,662 | INFO     | monitor loop #383: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:20,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:21,145 | INFO     | time since job start (5511s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:23,154 | INFO     | time since job start (5513s) is within the limit (349056.0s)
[2026-01-10 09:47:00] 2026-01-10 14:46:23,172 | INFO     | monitor loop #384: job 0:6965384103 is in state 'finished'
[2026-01-10 09:47:00] 2026-01-10 14:46:23,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,079 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 09:47:00] 2026-01-10 14:46:24,084 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.8399999999997
[2026-01-10 09:47:00] 2026-01-10 14:46:24,095 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6965384103/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,096 | INFO     | extracted standard info from prmon json
[2026-01-10 09:47:00] 2026-01-10 14:46:24,096 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:47:00] 2026-01-10 14:46:24,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:47:00] 2026-01-10 14:46:24,098 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:47:00] 2026-01-10 14:46:24,099 | INFO     | sum of square deviations: 170781430.74390286
[2026-01-10 09:47:00] 2026-01-10 14:46:24,099 | INFO     | sum of deviations: 12163354343.646336
[2026-01-10 09:47:00] 2026-01-10 14:46:24,099 | INFO     | mean x: 1768053707.6463416
[2026-01-10 09:47:00] 2026-01-10 14:46:24,099 | INFO     | mean y: 2779151.987804878
[2026-01-10 09:47:00] 2026-01-10 14:46:24,099 | INFO     | intersect: -125921120484.08496
[2026-01-10 09:47:00] 2026-01-10 14:46:24,100 | INFO     | chi2: 1.2865160095306611
[2026-01-10 09:47:00] 2026-01-10 14:46:24,100 | INFO     | current memory leak: 71.22 B/s (using 82 data points, chi2=1.29)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,100 | INFO     | could have reported an average CPU frequency of 3291 MHz (7 samples)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | ..............................
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . Timing measurements:
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . get job = 0 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . initial setup = 2 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . payload setup = 18 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . stage-in = 0 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . payload execution = 5432 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . stage-out = 3 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | . log creation = 1 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,101 | INFO     | ..............................
[2026-01-10 09:47:00] 2026-01-10 14:46:24,399 | INFO     | 
[2026-01-10 09:47:00] 2026-01-10 14:46:24,399 | INFO     | job summary report
[2026-01-10 09:47:00] 2026-01-10 14:46:24,399 | INFO     | --------------------------------------------------
[2026-01-10 09:47:00] 2026-01-10 14:46:24,399 | INFO     | PanDA job id: 6965384103
[2026-01-10 09:47:00] 2026-01-10 14:46:24,399 | INFO     | task id: 47962010
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | errors: (none)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | pilot state: finished 
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | transexitcode: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | exeerrorcode: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | exeerrordiag: 
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | exitcode: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | exitmsg: OK
[2026-01-10 09:47:00] 2026-01-10 14:46:24,401 | INFO     | cpuconsumptiontime: 10085 s
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | nevents: 50
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | neventsw: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | pid: 2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | pgrp: 2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | corecount: 10
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | event service: False
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | sizes: {0: 2284569, 10: 2284831, 11: 2284859, 5455: 2312396, 5460: 2321390, 5462: 2321446, 5486: 2321598}
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | --------------------------------------------------
[2026-01-10 09:47:00] 2026-01-10 14:46:24,402 | INFO     | 
[2026-01-10 09:47:00] 2026-01-10 14:46:24,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,500 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:47:00] 2026-01-10 14:46:24,501 | INFO     | job 6965384103 has completed (purged errors)
[2026-01-10 09:47:00] 2026-01-10 14:46:24,501 | INFO     | overall cleanup function is called
[2026-01-10 09:47:00] 2026-01-10 14:46:25,234 | INFO     | PID=2554992 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:47:00] 2026-01-10 14:46:25,235 | INFO     | .. there are 11 such processes running
[2026-01-10 09:47:00] 2026-01-10 14:46:25,521 | INFO     | --- collectZombieJob: --- 10, [2571443]
[2026-01-10 09:47:00] 2026-01-10 14:46:25,522 | INFO     | zombie collector waiting for pid 2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:25,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:47:00] 2026-01-10 14:46:25,522 | INFO     | collected zombie processes
[2026-01-10 09:47:00] 2026-01-10 14:46:25,522 | INFO     | will attempt to kill all subprocesses of pid=2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:26,473 | INFO     | process IDs to be killed: [2571443] (in reverse order)
[2026-01-10 09:47:00] 2026-01-10 14:46:26,604 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:47:00] 2026-01-10 14:46:26,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:47:00] 2026-01-10 14:46:26,626 | INFO     | did not find any defunct processes belonging to 2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:26,666 | INFO     | did not find any defunct processes belonging to 2571443
[2026-01-10 09:47:00] 2026-01-10 14:46:26,666 | INFO     | ready for new job
[2026-01-10 09:47:00] 2026-01-10 14:46:26,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:47:00] 2026-01-10 14:46:26,698 | INFO     | ***************************************
[2026-01-10 09:47:00] 2026-01-10 14:46:26,698 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:47:00] 2026-01-10 14:46:26,698 | INFO     | ***************************************
[2026-01-10 09:47:00] 2026-01-10 14:46:26,698 | INFO     | 
[2026-01-10 09:47:00] 2026-01-10 14:46:26,725 | INFO     | architecture information:
[2026-01-10 09:47:00] 2026-01-10 14:46:26,726 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:47:00] 2026-01-10 14:46:26,868 | INFO     | cat /etc/os-release:
[2026-01-10 09:47:00] NAME="CentOS Linux"
[2026-01-10 09:47:00] VERSION="7 (Core)"
[2026-01-10 09:47:00] ID="centos"
[2026-01-10 09:47:00] ID_LIKE="rhel fedora"
[2026-01-10 09:47:00] VERSION_ID="7"
[2026-01-10 09:47:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:47:00] ANSI_COLOR="0;31"
[2026-01-10 09:47:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:47:00] HOME_URL="https://www.centos.org/"
[2026-01-10 09:47:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:47:00] 
[2026-01-10 09:47:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:47:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:47:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:47:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:47:00] 
[2026-01-10 09:47:00] 2026-01-10 14:46:26,868 | INFO     | ***************************************
[2026-01-10 09:47:00] 2026-01-10 14:46:27,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 09:47:00] 2026-01-10 14:46:27,534 | INFO     | sufficient remaining disk space (85269151744 B)
[2026-01-10 09:47:00] 2026-01-10 14:46:27,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:47:00] 2026-01-10 14:46:27,535 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:47:00] 2026-01-10 14:46:27,535 | INFO     | update_server=False
[2026-01-10 09:47:00] 2026-01-10 14:46:27,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:47:00] 2026-01-10 14:46:27,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:47:00] 2026-01-10 14:46:27,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:47:00] 2026-01-10 14:46:27,538 | INFO     | aborting loop
[2026-01-10 09:47:00] 2026-01-10 14:46:28,051 | INFO     | all job control threads have been joined
[2026-01-10 09:47:00] 2026-01-10 14:46:28,254 | INFO     | all data control threads have been joined
[2026-01-10 09:47:00] 2026-01-10 14:46:28,542 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:28,546 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:28,670 | INFO     | all payload control threads have been joined
[2026-01-10 09:47:00] 2026-01-10 14:46:28,715 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:28,716 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:28,717 | INFO     | [job] validate thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:28,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:47:00] 2026-01-10 14:46:29,058 | INFO     | [job] control thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,232 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,232 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,238 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,261 | INFO     | [data] control thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:47:00] 2026-01-10 14:46:29,545 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,676 | INFO     | [payload] control thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,749 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:29,924 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:30,437 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:32,864 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:47:00] 2026-01-10 14:46:39,125 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:47:00] 2026-01-10 14:46:40,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990638556992)>', '<ExcThread(monitor, started 139990289868544)>']
[2026-01-10 09:47:00] 2026-01-10 14:46:46,010 | INFO     | all workflow threads have been joined
[2026-01-10 09:47:00] 2026-01-10 14:46:46,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:47:00] 2026-01-10 14:46:46,011 | INFO     | traces error code: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:46,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:47:00] 2026-01-10 14:46:57,905 | INFO     | PID=2554992 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | INFO     | .. there are 11 such processes running
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:47:00] 2026-01-10 14:46:57,906 | INFO     | [monitor] control thread has ended
[2026-01-10 09:47:00] 2026-01-10 14:46:58,840 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:47:00] 2026-01-10 14:46:58,907 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:47:00] 2026-01-10 14:46:58,918 [wrapper] pilotpid: 2554992
[2026-01-10 09:47:00] 2026-01-10 14:46:58,947 [wrapper] Pilot exit status: 0
[2026-01-10 09:47:00] 2026-01-10 14:46:59,096 [wrapper] pandaids: 6965384103
[2026-01-10 09:47:00] 2026-01-10 14:46:59,981 [wrapper] cleanup supervisor_pilot 2716329 2554993
[2026-01-10 09:47:00] 2026-01-10 14:47:00,027 [wrapper] Test setup, not cleaning
[2026-01-10 09:47:00] 2026-01-10 14:47:00,067 [wrapper] apfmon messages muted
[2026-01-10 09:47:00] 2026-01-10 14:47:00,109 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:47:00] 2026-01-10 14:47:00,156 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:47:00]  *** Error codes and diagnostics ***
[2026-01-10 09:47:00]     "exeErrorCode": 0,
[2026-01-10 09:47:00]     "exeErrorDiag": "",
[2026-01-10 09:47:00]     "pilotErrorCode": 0,
[2026-01-10 09:47:00]     "pilotErrorDiag": "",
[2026-01-10 09:47:00]  *** Listing of results directory ***
[2026-01-10 09:47:00] total 427108
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 09:47:00] -rwx------. 1 boincer umatlas     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:47:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:14 run_atlas
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:14 job.xml
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:14 EVNT.47962006._000079.pool.root.1
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:14 input.tar.gz
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 09:47:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:14 shared
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:14 boinc_lockfile
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas      2890 Jan 10 08:14 pandaJob.out
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas        57 Jan 10 08:14 setup.sh.local
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas    989556 Jan 10 08:14 agis_schedconf.cvmfs.json
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas   1516240 Jan 10 08:14 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:47:00] drwx------. 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas      6904 Jan 10 09:37 init_data.xml
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas       528 Jan 10 09:39 boinc_task_state.xml
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas  38701169 Jan 10 09:45 HITS.47962010._002244.pool.root.1
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas      1030 Jan 10 09:45 memory_monitor_summary.json
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas   1424863 Jan 10 09:45 log.47962010._002244.job.log.tgz.1
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas        95 Jan 10 09:46 pilot_heartbeat.json
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas      8525 Jan 10 09:46 heartbeat.json
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas        26 Jan 10 09:46 wrapper_checkpoint.txt
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas       823 Jan 10 09:46 pilotlog.txt
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas    776740 Jan 10 09:47 log.47962010._002244.job.log.1
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas       353 Jan 10 09:47 output.list
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas       620 Jan 10 09:47 runtime_log
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas   2222080 Jan 10 09:47 result.tar.gz
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas       654 Jan 10 09:47 UPLNDmHvny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmImmKDmcdTyGn.diag
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas      9344 Jan 10 09:47 runtime_log.err
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 09:47 boinc_mmap_file
[2026-01-10 09:47:00] -rw-r--r--. 1 boincer umatlas     22550 Jan 10 09:47 stderr.txt
[2026-01-10 09:47:00] HITS file was successfully produced:
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas 38701169 Jan 10 09:45 shared/HITS.pool.root.1
[2026-01-10 09:47:00]  *** Contents of shared directory: ***
[2026-01-10 09:47:00] total 421760
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas 390344352 Jan 10 08:14 ATLAS.root_0
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas    592617 Jan 10 08:14 input.tar.gz
[2026-01-10 09:47:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:14 start_atlas.sh
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas  38701169 Jan 10 09:45 HITS.pool.root.1
[2026-01-10 09:47:00] -rw-------. 1 boincer umatlas   2222080 Jan 10 09:47 result.tar.gz
09:47:22 (2548774): run_atlas exited; CPU time 10003.203011
09:47:22 (2548774): called boinc_finish(0)

</stderr_txt>
]]>

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