Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:49 (12364): wrapper (7.7.26015): starting
08:13:49 (12364): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:13:49] Arguments: --nthreads 8
[2026-01-10 08:13:49] Threads: 8
[2026-01-10 08:13:49] Checking for CVMFS
[2026-01-10 08:13:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:49] 2.11.2.0 2466 182515 131072 154980 1 19 12054374 18432001 185 130560 0 120265851 99.979 7184468 30250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:13:49] CVMFS is ok
[2026-01-10 08:13:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:49] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:49] Checking for apptainer binary...
[2026-01-10 08:13:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:49] Running /usr/bin/apptainer --version
[2026-01-10 08:13:49] apptainer version 1.3.2-1.el7
[2026-01-10 08:13:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:50] c-206-20.aglt2.org
[2026-01-10 08:13:50] apptainer works
[2026-01-10 08:13:50] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:13:50] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:13:50] Starting ATLAS job with PandaID=6965383880
[2026-01-10 08:13:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 09:43:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 09:43:29]  mtime=0
[2026-01-10 09:43:29]  protocol_id=None
[2026-01-10 09:43:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-10 09:43:29]  replicas=None
[2026-01-10 09:43:29]  scope=mc16_13TeV
[2026-01-10 09:43:29]  status=None
[2026-01-10 09:43:29]  status_code=0
[2026-01-10 09:43:29]  storage_token=
[2026-01-10 09:43:29]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6965383880/log.47962010._002021.job.log.tgz.1
[2026-01-10 09:43:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/48/52/log.47962010._002021.job.log.tgz.1
[2026-01-10 09:43:29]  workdir=None
[2026-01-10 09:43:29] ]
[2026-01-10 09:43:29] 2026-01-10 14:42:50,420 | INFO     | transferring file log.47962010._002021.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6965383880/log.47962010._002021.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-10 09:43:29] 2026-01-10 14:42:50,421 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6965383880/log.47962010._002021.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002021.job
[2026-01-10 09:43:29] 2026-01-10 14:42:50,438 | INFO     | adding to output.list: log.47962010._002021.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/48/52/log.47962010._002021.job.log.tgz.
[2026-01-10 09:43:29] 2026-01-10 14:42:50,439 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 09:43:29] 2026-01-10 14:42:50,439 | INFO     | summary of transferred files:
[2026-01-10 09:43:29] 2026-01-10 14:42:50,439 | INFO     |  -- lfn=log.47962010._002021.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 09:43:29] 2026-01-10 14:42:50,439 | INFO     | stage-out finished correctly
[2026-01-10 09:43:29] 2026-01-10 14:42:52,012 | INFO     | monitor loop #390: job 0:6965383880 is in state 'finished'
[2026-01-10 09:43:29] 2026-01-10 14:42:52,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:29] 2026-01-10 14:42:52,323 | INFO     | time since job start (5329s) is within the limit (349056.0s)
[2026-01-10 09:43:29] 2026-01-10 14:42:53,006 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 09:43:29] 2026-01-10 14:42:53,146 | INFO     | job 6965383880 has state=finished
[2026-01-10 09:43:29] 2026-01-10 14:42:53,146 | INFO     | preparing for final server update for job 6965383880 in state='finished'
[2026-01-10 09:43:29] 2026-01-10 14:42:53,217 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 09:43:29] 2026-01-10 14:42:53,217 | INFO     | this job has now completed (state=finished)
[2026-01-10 09:43:29] 2026-01-10 14:42:53,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 09:43:29] 2026-01-10 14:42:53,218 | INFO     | log transfer has been attempted: DONE
[2026-01-10 09:43:29] 2026-01-10 14:42:53,218 | INFO     | job 6965383880 has finished - writing final server update
[2026-01-10 09:43:29] 2026-01-10 14:42:53,218 | INFO     | total number of processed events: 50 (read)
[2026-01-10 09:43:29] 2026-01-10 14:42:53,219 | INFO     | executing command: lscpu
[2026-01-10 09:43:29] 2026-01-10 14:42:53,247 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 09:43:29] 2026-01-10 14:42:54,329 | INFO     | time since job start (5331s) is within the limit (349056.0s)
[2026-01-10 09:43:29] 2026-01-10 14:42:54,522 | INFO     | monitor loop #391: job 0:6965383880 is in state 'finished'
[2026-01-10 09:43:29] 2026-01-10 14:42:54,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 09:43:29] 2026-01-10 14:42:56,336 | INFO     | time since job start (5333s) is within the limit (349056.0s)
[2026-01-10 09:43:29] 2026-01-10 14:42:56,904 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 09:43:29] 2026-01-10 14:42:56,910 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.75
[2026-01-10 09:43:29] 2026-01-10 14:42:56,915 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6965383880/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 09:43:29] 2026-01-10 14:42:56,915 | INFO     | extracted standard info from prmon json
[2026-01-10 09:43:29] 2026-01-10 14:42:56,916 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 09:43:29] 2026-01-10 14:42:56,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 09:43:29] 2026-01-10 14:42:56,919 | INFO     | fitting pss+swap vs Time
[2026-01-10 09:43:29] 2026-01-10 14:42:56,920 | INFO     | sum of square deviations: 158699933.0
[2026-01-10 09:43:29] 2026-01-10 14:42:56,920 | INFO     | sum of deviations: -15951391774.75
[2026-01-10 09:43:29] 2026-01-10 14:42:56,921 | INFO     | mean x: 1768053584.25
[2026-01-10 09:43:29] 2026-01-10 14:42:56,921 | INFO     | mean y: 2535859.1875
[2026-01-10 09:43:29] 2026-01-10 14:42:56,921 | INFO     | intersect: 177714743217.98145
[2026-01-10 09:43:29] 2026-01-10 14:42:56,921 | INFO     | chi2: 0.8484956311468029
[2026-01-10 09:43:29] 2026-01-10 14:42:56,922 | INFO     | current memory leak: -100.51 B/s (using 80 data points, chi2=0.85)
[2026-01-10 09:43:29] 2026-01-10 14:42:56,922 | INFO     | could have reported an average CPU frequency of 2204 MHz (6 samples)
[2026-01-10 09:43:29] 2026-01-10 14:42:56,922 | INFO     | ..............................
[2026-01-10 09:43:29] 2026-01-10 14:42:56,922 | INFO     | . Timing measurements:
[2026-01-10 09:43:29] 2026-01-10 14:42:56,922 | INFO     | . get job = 0 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . initial setup = 2 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . payload setup = 6 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . stage-in = 0 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . payload execution = 5301 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . stage-out = 0 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,923 | INFO     | . log creation = 0 s
[2026-01-10 09:43:29] 2026-01-10 14:42:56,924 | INFO     | ..............................
[2026-01-10 09:43:29] 2026-01-10 14:42:57,317 | INFO     | 
[2026-01-10 09:43:29] 2026-01-10 14:42:57,318 | INFO     | job summary report
[2026-01-10 09:43:29] 2026-01-10 14:42:57,318 | INFO     | --------------------------------------------------
[2026-01-10 09:43:29] 2026-01-10 14:42:57,318 | INFO     | PanDA job id: 6965383880
[2026-01-10 09:43:29] 2026-01-10 14:42:57,318 | INFO     | task id: 47962010
[2026-01-10 09:43:29] 2026-01-10 14:42:57,318 | INFO     | errors: (none)
[2026-01-10 09:43:29] 2026-01-10 14:42:57,319 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 09:43:29] 2026-01-10 14:42:57,319 | INFO     | pilot state: finished 
[2026-01-10 09:43:29] 2026-01-10 14:42:57,319 | INFO     | transexitcode: 0
[2026-01-10 09:43:29] 2026-01-10 14:42:57,319 | INFO     | exeerrorcode: 0
[2026-01-10 09:43:29] 2026-01-10 14:42:57,319 | INFO     | exeerrordiag: 
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | exitcode: 0
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | exitmsg: OK
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | cpuconsumptiontime: 35643 s
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | nevents: 50
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | neventsw: 0
[2026-01-10 09:43:29] 2026-01-10 14:42:57,320 | INFO     | pid: 13690
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | pgrp: 13690
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | corecount: 8
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | event service: False
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | sizes: {0: 2283735, 1: 2284591, 5: 2284853, 12: 2284909, 5310: 2312091, 5311: 2312090, 5312: 2321268, 5314: 2321324, 5318: 2321570}
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | --------------------------------------------------
[2026-01-10 09:43:29] 2026-01-10 14:42:57,321 | INFO     | 
[2026-01-10 09:43:29] 2026-01-10 14:42:57,322 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-10 09:43:29] 2026-01-10 14:42:57,338 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,338 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,338 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,338 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,341 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 09:43:29] 2026-01-10 14:42:57,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,341 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 09:43:29] 2026-01-10 14:42:57,342 | INFO     | job 6965383880 has completed (purged errors)
[2026-01-10 09:43:29] 2026-01-10 14:42:57,342 | INFO     | overall cleanup function is called
[2026-01-10 09:43:29] 2026-01-10 14:42:58,357 | INFO     | --- collectZombieJob: --- 10, [13690]
[2026-01-10 09:43:29] 2026-01-10 14:42:58,357 | INFO     | zombie collector waiting for pid 13690
[2026-01-10 09:43:29] 2026-01-10 14:42:58,357 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 09:43:29] 2026-01-10 14:42:58,357 | INFO     | collected zombie processes
[2026-01-10 09:43:29] 2026-01-10 14:42:58,357 | INFO     | will attempt to kill all subprocesses of pid=13690
[2026-01-10 09:43:29] 2026-01-10 14:42:58,489 | INFO     | process IDs to be killed: [13690] (in reverse order)
[2026-01-10 09:43:29] 2026-01-10 14:42:58,544 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 09:43:29] 2026-01-10 14:42:58,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 09:43:29] 2026-01-10 14:42:58,550 | INFO     | did not find any defunct processes belonging to 13690
[2026-01-10 09:43:29] 2026-01-10 14:42:58,556 | INFO     | did not find any defunct processes belonging to 13690
[2026-01-10 09:43:29] 2026-01-10 14:42:58,556 | INFO     | ready for new job
[2026-01-10 09:43:29] 2026-01-10 14:42:58,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 09:43:29] 2026-01-10 14:42:58,558 | INFO     | ***************************************
[2026-01-10 09:43:29] 2026-01-10 14:42:58,558 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 09:43:29] 2026-01-10 14:42:58,558 | INFO     | ***************************************
[2026-01-10 09:43:29] 2026-01-10 14:42:58,559 | INFO     | 
[2026-01-10 09:43:29] 2026-01-10 14:42:58,560 | INFO     | architecture information:
[2026-01-10 09:43:29] 2026-01-10 14:42:58,560 | INFO     | executing command: cat /etc/os-release
[2026-01-10 09:43:29] 2026-01-10 14:42:58,575 | INFO     | cat /etc/os-release:
[2026-01-10 09:43:29] NAME="CentOS Linux"
[2026-01-10 09:43:29] VERSION="7 (Core)"
[2026-01-10 09:43:29] ID="centos"
[2026-01-10 09:43:29] ID_LIKE="rhel fedora"
[2026-01-10 09:43:29] VERSION_ID="7"
[2026-01-10 09:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 09:43:29] ANSI_COLOR="0;31"
[2026-01-10 09:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 09:43:29] HOME_URL="https://www.centos.org/"
[2026-01-10 09:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 09:43:29] 
[2026-01-10 09:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 09:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 09:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 09:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 09:43:29] 
[2026-01-10 09:43:29] 2026-01-10 14:42:58,575 | INFO     | ***************************************
[2026-01-10 09:43:29] 2026-01-10 14:42:59,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-10 09:43:29] 2026-01-10 14:42:59,093 | INFO     | sufficient remaining disk space (27969716224 B)
[2026-01-10 09:43:29] 2026-01-10 14:42:59,093 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 09:43:29] 2026-01-10 14:42:59,094 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 09:43:29] 2026-01-10 14:42:59,094 | INFO     | update_server=False
[2026-01-10 09:43:29] 2026-01-10 14:42:59,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 09:43:29] 2026-01-10 14:42:59,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 09:43:29] 2026-01-10 14:42:59,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 09:43:29] 2026-01-10 14:42:59,533 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 09:43:29] 2026-01-10 14:42:59,533 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 09:43:29] 2026-01-10 14:42:59,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:29] 2026-01-10 14:42:59,533 | INFO     | will abort loop
[2026-01-10 09:43:29] 2026-01-10 14:42:59,568 | INFO     | all data control threads have been joined
[2026-01-10 09:43:29] 2026-01-10 14:43:00,100 | INFO     | [job] retrieve thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,120 | INFO     | [payload] validate_post thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,185 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,223 | INFO     | [payload] failed_post thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,504 | INFO     | all payload control threads have been joined
[2026-01-10 09:43:29] 2026-01-10 14:43:00,542 | INFO     | [job] job monitor thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,573 | INFO     | [data] control thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,768 | INFO     | all job control threads have been joined
[2026-01-10 09:43:29] 2026-01-10 14:43:00,862 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:00,922 | INFO     | [job] validate thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:01,032 | INFO     | [data] copytool_in thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:01,100 | INFO     | [data] copytool_out thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:01,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:01,511 | INFO     | [payload] control thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:01,773 | INFO     | [job] control thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:02,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 09:43:29] 2026-01-10 14:43:03,093 | INFO     | [job] queue monitor thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:03,158 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:09,962 | INFO     | job.realtimelogging is not enabled
[2026-01-10 09:43:29] 2026-01-10 14:43:10,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 09:43:29] 2026-01-10 14:43:11,142 | INFO     | [monitor] cgroup control has ended
[2026-01-10 09:43:29] 2026-01-10 14:43:12,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140491761928000)>', '<ExcThread(monitor, started 140491022640896)>']
[2026-01-10 09:43:29] 2026-01-10 14:43:17,657 | INFO     | all workflow threads have been joined
[2026-01-10 09:43:29] 2026-01-10 14:43:17,657 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 09:43:29] 2026-01-10 14:43:17,658 | INFO     | traces error code: 0
[2026-01-10 09:43:29] 2026-01-10 14:43:17,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 09:43:29] 2026-01-10 14:43:29,576 | INFO     | PID=21394 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 09:43:29] 2026-01-10 14:43:29,576 | INFO     | .. there are 3 such processes running
[2026-01-10 09:43:29] 2026-01-10 14:43:29,576 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 09:43:29] 2026-01-10 14:43:29,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 09:43:29] 2026-01-10 14:43:29,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 09:43:29] 2026-01-10 14:43:29,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 09:43:29] 2026-01-10 14:43:29,577 | INFO     | [monitor] control thread has ended
[2026-01-10 09:43:29] 2026-01-10 14:43:29,693 [wrapper] ==== pilot stdout END ====
[2026-01-10 09:43:29] 2026-01-10 14:43:29,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 09:43:29] 2026-01-10 14:43:29,697 [wrapper] pilotpid: 21394
[2026-01-10 09:43:29] 2026-01-10 14:43:29,700 [wrapper] Pilot exit status: 0
[2026-01-10 09:43:29] 2026-01-10 14:43:29,708 [wrapper] pandaids: 6965383880
[2026-01-10 09:43:29] 2026-01-10 14:43:29,747 [wrapper] cleanup supervisor_pilot 17749 21395
[2026-01-10 09:43:29] 2026-01-10 14:43:29,749 [wrapper] Test setup, not cleaning
[2026-01-10 09:43:29] 2026-01-10 14:43:29,752 [wrapper] apfmon messages muted
[2026-01-10 09:43:29] 2026-01-10 14:43:29,754 [wrapper] ==== wrapper stdout END ====
[2026-01-10 09:43:29] 2026-01-10 14:43:29,756 [wrapper] ==== wrapper stderr END ====
[2026-01-10 09:43:29]  *** Error codes and diagnostics ***
[2026-01-10 09:43:29]     "exeErrorCode": 0,
[2026-01-10 09:43:29]     "exeErrorDiag": "",
[2026-01-10 09:43:29]     "pilotErrorCode": 0,
[2026-01-10 09:43:29]     "pilotErrorDiag": "",
[2026-01-10 09:43:29]  *** Listing of results directory ***
[2026-01-10 09:43:29] total 438004
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 09:43:29] -rwx------ 1 boincer umatlas     36322 Jan 10 08:11 runpilot2-wrapper.sh
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 09:43:29] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas 392712777 Jan 10 08:13 EVNT.47962006._000047.pool.root.1
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 09:43:29] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas    592615 Jan 10 08:13 input.tar.gz
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas      2887 Jan 10 08:13 pandaJob.out
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas        57 Jan 10 08:13 setup.sh.local
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas    989556 Jan 10 08:14 agis_schedconf.cvmfs.json
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas   1516240 Jan 10 08:14 agis_ddmendpoints.agis.ALL.json
[2026-01-10 09:43:29] drwx------ 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas       530 Jan 10 09:27 boinc_task_state.xml
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas      5951 Jan 10 09:39 init_data.xml
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas  47884280 Jan 10 09:42 HITS.47962010._002021.pool.root.1
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas      1050 Jan 10 09:42 memory_monitor_summary.json
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas        95 Jan 10 09:42 pilot_heartbeat.json
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas   1211712 Jan 10 09:42 log.47962010._002021.job.log.tgz.1
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas      8608 Jan 10 09:42 heartbeat.json
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 09:43 boinc_mmap_file
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas        27 Jan 10 09:43 wrapper_checkpoint.txt
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas       820 Jan 10 09:43 pilotlog.txt
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas    787929 Jan 10 09:43 log.47962010._002021.job.log.1
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas       353 Jan 10 09:43 output.list
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas       620 Jan 10 09:43 runtime_log
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas   2017280 Jan 10 09:43 result.tar.gz
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas      9342 Jan 10 09:43 runtime_log.err
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas       659 Jan 10 09:43 491MDmHvny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2lmKDmxKdJgm.diag
[2026-01-10 09:43:29] -rw-r--r-- 1 boincer umatlas     21730 Jan 10 09:43 stderr.txt
[2026-01-10 09:43:29] HITS file was successfully produced:
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas 47884280 Jan 10 09:42 shared/HITS.pool.root.1
[2026-01-10 09:43:29]  *** Contents of shared directory: ***
[2026-01-10 09:43:29] total 432852
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas 392712777 Jan 10 08:13 ATLAS.root_0
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 09:43:29] -rw-r--r-- 2 boincer umatlas    592615 Jan 10 08:13 input.tar.gz
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas  47884280 Jan 10 09:42 HITS.pool.root.1
[2026-01-10 09:43:29] -rw------- 1 boincer umatlas   2017280 Jan 10 09:43 result.tar.gz
09:43:31 (12364): run_atlas exited; CPU time 35580.246744
09:43:31 (12364): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN