Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:10 (2862044): wrapper (7.7.26015): starting
08:47:10 (2862044): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:47:10] Arguments: --nthreads 8
[2026-01-10 08:47:10] Threads: 8
[2026-01-10 08:47:10] Checking for CVMFS
[2026-01-10 08:47:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:47:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:47:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:47:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:47:11] 2.13.3.0 11460 94930 151172 154981 1 148 20596069 32935936 18379 16776704 0 759039767 99.641 695083233 35565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-10 08:47:11] CVMFS is ok
[2026-01-10 08:47:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:47:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:47:11] Further information can be found at the LHC@home message board.
[2026-01-10 08:47:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:47:11] Checking for apptainer binary...
[2026-01-10 08:47:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:47:11] Running /usr/bin/apptainer --version
[2026-01-10 08:47:11] apptainer version 1.4.5-2.el9
[2026-01-10 08:47:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:47:11] c7-3-34.aglt2.org
[2026-01-10 08:47:11] apptainer works
[2026-01-10 08:47:11] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:47:11] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:47:12] Starting ATLAS job with PandaID=6965383399
[2026-01-10 08:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:23:41]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:23:41] 2026-01-10 19:23:02,581 | INFO     | time since job start (20100s) is within the limit (349056.0s)
[2026-01-10 14:23:41] 2026-01-10 19:23:02,743 | INFO     | monitor loop #1333: job 0:6965383399 is in state 'finished'
[2026-01-10 14:23:41] 2026-01-10 19:23:02,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:23:41] 2026-01-10 19:23:04,588 | INFO     | time since job start (20102s) is within the limit (349056.0s)
[2026-01-10 14:23:41] 2026-01-10 19:23:05,252 | INFO     | monitor loop #1334: job 0:6965383399 is in state 'finished'
[2026-01-10 14:23:41] 2026-01-10 19:23:05,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:23:41] 2026-01-10 19:23:06,599 | INFO     | time since job start (20104s) is within the limit (349056.0s)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,757 | INFO     | monitor loop #1335: job 0:6965383399 is in state 'finished'
[2026-01-10 14:23:41] 2026-01-10 19:23:07,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,819 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 14:23:41] 2026-01-10 19:23:07,825 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3105.9253437499997
[2026-01-10 14:23:41] 2026-01-10 19:23:07,838 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965383399/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,839 | INFO     | extracted standard info from prmon json
[2026-01-10 14:23:41] 2026-01-10 19:23:07,840 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:23:41] 2026-01-10 19:23:07,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:23:41] 2026-01-10 19:23:07,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:23:41] 2026-01-10 19:23:07,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:23:41] 2026-01-10 19:23:07,852 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:23:41] 2026-01-10 19:23:07,853 | INFO     | sum of square deviations: 10941618320.070156
[2026-01-10 14:23:41] 2026-01-10 19:23:07,857 | INFO     | sum of deviations: 72375660825.80798
[2026-01-10 14:23:41] 2026-01-10 19:23:07,857 | INFO     | mean x: 1768062980.6554878
[2026-01-10 14:23:41] 2026-01-10 19:23:07,857 | INFO     | mean y: 2493509.8567073173
[2026-01-10 14:23:41] 2026-01-10 19:23:07,857 | INFO     | intersect: -11692735007.835566
[2026-01-10 14:23:41] 2026-01-10 19:23:07,858 | INFO     | chi2: 3.291318696666769
[2026-01-10 14:23:41] 2026-01-10 19:23:07,858 | INFO     | sum of square deviations: 10448824634.947357
[2026-01-10 14:23:41] 2026-01-10 19:23:07,861 | INFO     | sum of deviations: 90753670927.15793
[2026-01-10 14:23:41] 2026-01-10 19:23:07,861 | INFO     | mean x: 1768062828.1578948
[2026-01-10 14:23:41] 2026-01-10 19:23:07,861 | INFO     | mean y: 2499117.5263157897
[2026-01-10 14:23:41] 2026-01-10 19:23:07,861 | INFO     | intersect: -15354079032.757685
[2026-01-10 14:23:41] 2026-01-10 19:23:07,862 | INFO     | chi2: 2.621227345493774
[2026-01-10 14:23:41] 2026-01-10 19:23:07,862 | INFO     | current chi2=2.621227345493774 (change=20.359357841937936 %)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,862 | INFO     | right removable region: 322
[2026-01-10 14:23:41] 2026-01-10 19:23:07,862 | INFO     | sum of square deviations: 10448793524.94736
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | sum of deviations: -6263690677.473673
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | mean x: 1768063133.1578948
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | mean y: 2517752.3034055727
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | intersect: 1062410508.1421034
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | chi2: 0.852107065978202
[2026-01-10 14:23:41] 2026-01-10 19:23:07,865 | INFO     | current chi2=0.852107065978202 (change=74.1104662140084 %)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,866 | INFO     | sum of square deviations: 9970992267.320803
[2026-01-10 14:23:41] 2026-01-10 19:23:07,868 | INFO     | sum of deviations: -13845630243.698112
[2026-01-10 14:23:41] 2026-01-10 19:23:07,868 | INFO     | mean x: 1768063285.6603773
[2026-01-10 14:23:41] 2026-01-10 19:23:07,868 | INFO     | mean y: 2520157.317610063
[2026-01-10 14:23:41] 2026-01-10 19:23:07,868 | INFO     | intersect: 2457636944.534748
[2026-01-10 14:23:41] 2026-01-10 19:23:07,869 | INFO     | chi2: 0.8213082683335702
[2026-01-10 14:23:41] 2026-01-10 19:23:07,869 | INFO     | current chi2=0.8213082683335702 (change=3.6144281480960814 %)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,869 | INFO     | left removable region: 20
[2026-01-10 14:23:41] 2026-01-10 19:23:07,870 | INFO     | sum of square deviations: 8540372135.870824
[2026-01-10 14:23:41] 2026-01-10 19:23:07,872 | INFO     | sum of deviations: 15079567961.413908
[2026-01-10 14:23:41] 2026-01-10 19:23:07,872 | INFO     | mean x: 1768063407.6589403
[2026-01-10 14:23:41] 2026-01-10 19:23:07,872 | INFO     | mean y: 2522703.605960265
[2026-01-10 14:23:41] 2026-01-10 19:23:07,872 | INFO     | intersect: -3119312257.648159
[2026-01-10 14:23:41] 2026-01-10 19:23:07,872 | INFO     | chi2: 0.07979269251250987
[2026-01-10 14:23:41] 2026-01-10 19:23:07,873 | INFO     | current memory leak: 1.77 B/s (using 302 data points, chi2=0.08)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,877 | INFO     | could have reported an average CPU frequency of 3184 MHz (15 samples)
[2026-01-10 14:23:41] 2026-01-10 19:23:07,877 | INFO     | ..............................
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . Timing measurements:
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . get job = 0 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . initial setup = 5 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . payload setup = 45 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . stage-in = 0 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . payload execution = 19991 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . stage-out = 2 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | . log creation = 0 s
[2026-01-10 14:23:41] 2026-01-10 19:23:07,878 | INFO     | ..............................
[2026-01-10 14:23:41] 2026-01-10 19:23:08,441 | INFO     | 
[2026-01-10 14:23:41] 2026-01-10 19:23:08,443 | INFO     | job summary report
[2026-01-10 14:23:41] 2026-01-10 19:23:08,443 | INFO     | --------------------------------------------------
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | PanDA job id: 6965383399
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | task id: 47898826
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | errors: (none)
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | pilot state: finished 
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | transexitcode: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | exeerrorcode: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | exeerrordiag: 
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | exitcode: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | exitmsg: OK
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | cpuconsumptiontime: 43839 s
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | nevents: 400
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | neventsw: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | pid: 2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | pgrp: 2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | corecount: 8
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | event service: False
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | sizes: {0: 2283920, 1: 2283920, 11: 2283948, 22: 2283976, 26: 2284266, 33: 2284294, 20040: 2318002, 20044: 2327056, 20052: 2327194}
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | --------------------------------------------------
[2026-01-10 14:23:41] 2026-01-10 19:23:08,444 | INFO     | 
[2026-01-10 14:23:41] 2026-01-10 19:23:08,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,511 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:23:41] 2026-01-10 19:23:08,512 | INFO     | job 6965383399 has completed (purged errors)
[2026-01-10 14:23:41] 2026-01-10 19:23:08,512 | INFO     | overall cleanup function is called
[2026-01-10 14:23:41] 2026-01-10 19:23:09,521 | INFO     | --- collectZombieJob: --- 10, [2874910]
[2026-01-10 14:23:41] 2026-01-10 19:23:09,522 | INFO     | zombie collector waiting for pid 2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:09,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:23:41] 2026-01-10 19:23:09,522 | INFO     | collected zombie processes
[2026-01-10 14:23:41] 2026-01-10 19:23:09,522 | INFO     | will attempt to kill all subprocesses of pid=2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:10,131 | INFO     | process IDs to be killed: [2874910] (in reverse order)
[2026-01-10 14:23:41] 2026-01-10 19:23:10,274 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:23:41] 2026-01-10 19:23:10,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:23:41] 2026-01-10 19:23:10,301 | INFO     | did not find any defunct processes belonging to 2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:10,332 | INFO     | did not find any defunct processes belonging to 2874910
[2026-01-10 14:23:41] 2026-01-10 19:23:10,332 | INFO     | ready for new job
[2026-01-10 14:23:41] 2026-01-10 19:23:10,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:23:41] 2026-01-10 19:23:10,335 | INFO     | ***************************************
[2026-01-10 14:23:41] 2026-01-10 19:23:10,335 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:23:41] 2026-01-10 19:23:10,335 | INFO     | ***************************************
[2026-01-10 14:23:41] 2026-01-10 19:23:10,335 | INFO     | 
[2026-01-10 14:23:41] 2026-01-10 19:23:10,344 | INFO     | architecture information:
[2026-01-10 14:23:41] 2026-01-10 19:23:10,352 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:23:41] 2026-01-10 19:23:10,382 | INFO     | cat /etc/os-release:
[2026-01-10 14:23:41] NAME="CentOS Linux"
[2026-01-10 14:23:41] VERSION="7 (Core)"
[2026-01-10 14:23:41] ID="centos"
[2026-01-10 14:23:41] ID_LIKE="rhel fedora"
[2026-01-10 14:23:41] VERSION_ID="7"
[2026-01-10 14:23:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:23:41] ANSI_COLOR="0;31"
[2026-01-10 14:23:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:23:41] HOME_URL="https://www.centos.org/"
[2026-01-10 14:23:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:23:41] 
[2026-01-10 14:23:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:23:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:23:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:23:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:23:41] 
[2026-01-10 14:23:41] 2026-01-10 19:23:10,382 | INFO     | ***************************************
[2026-01-10 14:23:41] 2026-01-10 19:23:10,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 14:23:41] 2026-01-10 19:23:10,954 | INFO     | sufficient remaining disk space (76547096576 B)
[2026-01-10 14:23:41] 2026-01-10 19:23:10,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:23:41] 2026-01-10 19:23:10,955 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:23:41] 2026-01-10 19:23:10,955 | INFO     | update_server=False
[2026-01-10 14:23:41] 2026-01-10 19:23:10,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:23:41] 2026-01-10 19:23:10,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:23:41] 2026-01-10 19:23:10,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:23:41] 2026-01-10 19:23:11,267 | INFO     | all data control threads have been joined
[2026-01-10 14:23:41] 2026-01-10 19:23:11,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:23:41] 2026-01-10 19:23:11,270 | INFO     | aborting loop
[2026-01-10 14:23:41] 2026-01-10 19:23:11,406 | INFO     | all job control threads have been joined
[2026-01-10 14:23:41] 2026-01-10 19:23:11,823 | INFO     | all payload control threads have been joined
[2026-01-10 14:23:41] 2026-01-10 19:23:11,961 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:11,965 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:11,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,027 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,274 | INFO     | [data] control thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,276 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,412 | INFO     | [job] control thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,587 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,794 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,829 | INFO     | [payload] control thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,963 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:12,976 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:13,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:23:41] 2026-01-10 19:23:13,087 | INFO     | [job] validate thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:13,090 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:14,020 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:14,969 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:23:41] 2026-01-10 19:23:36,086 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:23:41] 2026-01-10 19:23:36,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074616276800)>', '<ExcThread(monitor, started 140074343700224)>']
[2026-01-10 14:23:41] 2026-01-10 19:23:40,099 | INFO     | PID=2865803 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:23:41] 2026-01-10 19:23:40,099 | INFO     | .. there are 13 such processes running
[2026-01-10 14:23:41] 2026-01-10 19:23:40,100 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:23:41] 2026-01-10 19:23:40,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:23:41] 2026-01-10 19:23:40,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:23:41] 2026-01-10 19:23:40,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:23:41] 2026-01-10 19:23:40,101 | INFO     | [monitor] control thread has ended
[2026-01-10 14:23:41] 2026-01-10 19:23:41,395 | INFO     | all workflow threads have been joined
[2026-01-10 14:23:41] 2026-01-10 19:23:41,395 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:23:41] 2026-01-10 19:23:41,396 | INFO     | traces error code: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:41,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:23:41] 2026-01-10 19:23:41,528 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:23:41] 2026-01-10 19:23:41,531 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:23:41] 2026-01-10 19:23:41,534 [wrapper] pilotpid: 2865803
[2026-01-10 14:23:41] 2026-01-10 19:23:41,537 [wrapper] Pilot exit status: 0
[2026-01-10 14:23:41] 2026-01-10 19:23:41,555 [wrapper] pandaids: 6965383399
[2026-01-10 14:23:41] 2026-01-10 19:23:41,646 [wrapper] cleanup supervisor_pilot 3652714 2865804
[2026-01-10 14:23:41] 2026-01-10 19:23:41,662 [wrapper] Test setup, not cleaning
[2026-01-10 14:23:41] 2026-01-10 19:23:41,665 [wrapper] apfmon messages muted
[2026-01-10 14:23:41] 2026-01-10 19:23:41,667 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:23:41] 2026-01-10 19:23:41,669 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:23:41]  *** Error codes and diagnostics ***
[2026-01-10 14:23:41]     "exeErrorCode": 0,
[2026-01-10 14:23:41]     "exeErrorDiag": "",
[2026-01-10 14:23:41]     "pilotErrorCode": 0,
[2026-01-10 14:23:41]     "pilotErrorDiag": "",
[2026-01-10 14:23:41]  *** Listing of results directory ***
[2026-01-10 14:23:41] total 441524
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 14:23:41] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:23:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:47 run_atlas
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:47 job.xml
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas 225328712 Jan 10 08:47 EVNT.47898824._001424.pool.root.1
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:47 start_atlas.sh
[2026-01-10 14:23:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:47 shared
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 08:47 input.tar.gz
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:47 boinc_lockfile
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 08:47 pandaJob.out
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas        57 Jan 10 08:47 setup.sh.local
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas    989556 Jan 10 08:47 agis_schedconf.cvmfs.json
[2026-01-10 14:23:41] drwx------. 5 boincer umatlas      4096 Jan 10 08:48 pilot3
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 14:18 init_data.xml
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas 216489223 Jan 10 14:22 HITS.47898826._040539.pool.root.1
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas       531 Jan 10 14:22 boinc_task_state.xml
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas      1033 Jan 10 14:22 memory_monitor_summary.json
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas    528356 Jan 10 14:22 log.47898826._040539.job.log.tgz.1
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas      7773 Jan 10 14:23 heartbeat.json
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas        95 Jan 10 14:23 pilot_heartbeat.json
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:23 boinc_mmap_file
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas        28 Jan 10 14:23 wrapper_checkpoint.txt
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas      4824 Jan 10 14:23 pilotlog.txt
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas   2665391 Jan 10 14:23 log.47898826._040539.job.log.1
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas       357 Jan 10 14:23 output.list
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:23 runtime_log
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas   3215360 Jan 10 14:23 result.tar.gz
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas       655 Jan 10 14:23 YHoLDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPlmKDmLiuCYo.diag
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 14:23 runtime_log.err
[2026-01-10 14:23:41] -rw-r--r--. 1 boincer umatlas     21427 Jan 10 14:23 stderr.txt
[2026-01-10 14:23:41] HITS file was successfully produced:
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas 216489223 Jan 10 14:22 shared/HITS.pool.root.1
[2026-01-10 14:23:41]  *** Contents of shared directory: ***
[2026-01-10 14:23:41] total 435208
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas 225328712 Jan 10 08:47 ATLAS.root_0
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:47 start_atlas.sh
[2026-01-10 14:23:41] -rw-r--r--. 2 boincer umatlas    592404 Jan 10 08:47 input.tar.gz
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas 216489223 Jan 10 14:22 HITS.pool.root.1
[2026-01-10 14:23:41] -rw-------. 1 boincer umatlas   3215360 Jan 10 14:23 result.tar.gz
14:23:43 (2862044): run_atlas exited; CPU time 44437.764279
14:23:43 (2862044): called boinc_finish(0)

</stderr_txt>
]]>

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