Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:24 (2784): wrapper (7.7.26015): starting
08:13:24 (2784): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:13:24] Arguments: --nthreads 8
[2026-01-10 08:13:24] Threads: 8
[2026-01-10 08:13:24] Checking for CVMFS
[2026-01-10 08:13:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:24] 2.11.2.0 2466 182515 129868 154980 1 1 12047649 18432000 1 130560 0 120228486 99.979 7182966 30249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:13:24] CVMFS is ok
[2026-01-10 08:13:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:24] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:24] Checking for apptainer binary...
[2026-01-10 08:13:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:24] Running /usr/bin/apptainer --version
[2026-01-10 08:13:24] apptainer version 1.3.2-1.el7
[2026-01-10 08:13:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:26] c-206-20.aglt2.org
[2026-01-10 08:13:26] apptainer works
[2026-01-10 08:13:26] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:13:26] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:13:26] Starting ATLAS job with PandaID=6965383391
[2026-01-10 08:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 11:49:06]  *** The last 200 lines of the pilot log: ***
[2026-01-10 11:49:06] 2026-01-10 16:48:03,336 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1723.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,339 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383391/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,340 | INFO     | extracted standard info from prmon json
[2026-01-10 11:49:06] 2026-01-10 16:48:03,340 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 11:49:06] 2026-01-10 16:48:03,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 11:49:06] 2026-01-10 16:48:03,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 11:49:06] 2026-01-10 16:48:03,340 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 11:49:06] 2026-01-10 16:48:03,344 | INFO     | fitting pss+swap vs Time
[2026-01-10 11:49:06] 2026-01-10 16:48:03,344 | INFO     | sum of square deviations: 2912836010.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,345 | INFO     | sum of deviations: 24681482975.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,345 | INFO     | mean x: 1768057253.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,345 | INFO     | mean y: 2468436.0189573457
[2026-01-10 11:49:06] 2026-01-10 16:48:03,346 | INFO     | intersect: -14978901898.229544
[2026-01-10 11:49:06] 2026-01-10 16:48:03,346 | INFO     | chi2: 2.201901668555453
[2026-01-10 11:49:06] 2026-01-10 16:48:03,346 | INFO     | sum of square deviations: 2710627567.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,347 | INFO     | sum of deviations: 37883189198.499985
[2026-01-10 11:49:06] 2026-01-10 16:48:03,348 | INFO     | mean x: 1768057100.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,348 | INFO     | mean y: 2478190.839805825
[2026-01-10 11:49:06] 2026-01-10 16:48:03,348 | INFO     | intersect: -24707534521.739456
[2026-01-10 11:49:06] 2026-01-10 16:48:03,348 | INFO     | chi2: 1.4309887262899006
[2026-01-10 11:49:06] 2026-01-10 16:48:03,348 | INFO     | current chi2=1.4309887262899006 (change=35.011233847300105 %)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,349 | INFO     | sum of square deviations: 2518000700.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,350 | INFO     | sum of deviations: 36932518808.00003
[2026-01-10 11:49:06] 2026-01-10 16:48:03,350 | INFO     | mean x: 1768056948.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,350 | INFO     | mean y: 2477438.069651741
[2026-01-10 11:49:06] 2026-01-10 16:48:03,350 | INFO     | intersect: -25930317769.503216
[2026-01-10 11:49:06] 2026-01-10 16:48:03,351 | INFO     | chi2: 1.4311803561908296
[2026-01-10 11:49:06] 2026-01-10 16:48:03,351 | INFO     | current chi2=1.4311803561908296 (change=-0.013391433308203624 %)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,351 | INFO     | right removable region: 200
[2026-01-10 11:49:06] 2026-01-10 16:48:03,351 | INFO     | sum of square deviations: 2710627567.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,352 | INFO     | sum of deviations: -8226399976.000001
[2026-01-10 11:49:06] 2026-01-10 16:48:03,352 | INFO     | mean x: 1768057405.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,352 | INFO     | mean y: 2493025.776699029
[2026-01-10 11:49:06] 2026-01-10 16:48:03,353 | INFO     | intersect: 5368315897.410215
[2026-01-10 11:49:06] 2026-01-10 16:48:03,353 | INFO     | chi2: 0.8332335133016596
[2026-01-10 11:49:06] 2026-01-10 16:48:03,353 | INFO     | current chi2=0.8332335133016596 (change=62.15845942619688 %)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,353 | INFO     | sum of square deviations: 2518000700.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,354 | INFO     | sum of deviations: -13620099398.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,354 | INFO     | mean x: 1768057558.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | mean y: 2497253.6666666665
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | intersect: 9566084619.36722
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | chi2: 0.7920187779545812
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | current chi2=0.7920187779545812 (change=4.946360736711901 %)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | left removable region: 20
[2026-01-10 11:49:06] 2026-01-10 16:48:03,355 | INFO     | sum of square deviations: 1808350185.0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,356 | INFO     | sum of deviations: -1919517683.0000002
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | mean x: 1768057527.5
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | mean y: 2509909.4111111113
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | intersect: 1879257962.2764964
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | chi2: 0.0023561377176724418
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | current memory leak: -1.06 B/s (using 180 data points, chi2=0.00)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,357 | INFO     | could have reported an average CPU frequency of 2183 MHz (11 samples)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | ..............................
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . Timing measurements:
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . get job = 0 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . initial setup = 2 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . payload setup = 6 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . stage-in = 0 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . payload execution = 12824 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . stage-out = 1 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,358 | INFO     | . log creation = 0 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,359 | INFO     | ..............................
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | 
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | job summary report
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | --------------------------------------------------
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | PanDA job id: 6965383391
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | task id: 47898826
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | errors: (none)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,439 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | pilot state: finished 
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | transexitcode: 0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | exeerrorcode: 0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | exeerrordiag: 
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | exitcode: 0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | exitmsg: OK
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | cpuconsumptiontime: 97820 s
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | nevents: 400
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | neventsw: 0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,440 | INFO     | pid: 23914
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | pgrp: 23914
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | corecount: 8
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | event service: False
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | sizes: {0: 2283920, 4: 2284182, 11: 2284210, 12834: 2314212, 12835: 2314211, 12838: 2323265, 12841: 2323449, 12847: 2323643}
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | --------------------------------------------------
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | 
[2026-01-10 11:49:06] 2026-01-10 16:48:03,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 11:49:06] 2026-01-10 16:48:03,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,462 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 11:49:06] 2026-01-10 16:48:03,462 | INFO     | job 6965383391 has completed (purged errors)
[2026-01-10 11:49:06] 2026-01-10 16:48:03,462 | INFO     | overall cleanup function is called
[2026-01-10 11:49:06] 2026-01-10 16:48:04,320 | INFO     | PID=7747 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 11:49:06] 2026-01-10 16:48:04,320 | INFO     | .. there are 2 such processes running
[2026-01-10 11:49:06] 2026-01-10 16:48:04,467 | INFO     | --- collectZombieJob: --- 10, [23914]
[2026-01-10 11:49:06] 2026-01-10 16:48:04,467 | INFO     | zombie collector waiting for pid 23914
[2026-01-10 11:49:06] 2026-01-10 16:48:04,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 11:49:06] 2026-01-10 16:48:04,467 | INFO     | collected zombie processes
[2026-01-10 11:49:06] 2026-01-10 16:48:04,467 | INFO     | will attempt to kill all subprocesses of pid=23914
[2026-01-10 11:49:06] 2026-01-10 16:48:04,573 | INFO     | process IDs to be killed: [23914] (in reverse order)
[2026-01-10 11:49:06] 2026-01-10 16:48:04,627 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 11:49:06] 2026-01-10 16:48:04,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 11:49:06] 2026-01-10 16:48:04,632 | INFO     | did not find any defunct processes belonging to 23914
[2026-01-10 11:49:06] 2026-01-10 16:48:04,635 | INFO     | did not find any defunct processes belonging to 23914
[2026-01-10 11:49:06] 2026-01-10 16:48:04,635 | INFO     | ready for new job
[2026-01-10 11:49:06] 2026-01-10 16:48:04,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 11:49:06] 2026-01-10 16:48:04,637 | INFO     | ***************************************
[2026-01-10 11:49:06] 2026-01-10 16:48:04,637 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 11:49:06] 2026-01-10 16:48:04,637 | INFO     | ***************************************
[2026-01-10 11:49:06] 2026-01-10 16:48:04,637 | INFO     | 
[2026-01-10 11:49:06] 2026-01-10 16:48:04,638 | INFO     | architecture information:
[2026-01-10 11:49:06] 2026-01-10 16:48:04,638 | INFO     | executing command: cat /etc/os-release
[2026-01-10 11:49:06] 2026-01-10 16:48:04,652 | INFO     | cat /etc/os-release:
[2026-01-10 11:49:06] NAME="CentOS Linux"
[2026-01-10 11:49:06] VERSION="7 (Core)"
[2026-01-10 11:49:06] ID="centos"
[2026-01-10 11:49:06] ID_LIKE="rhel fedora"
[2026-01-10 11:49:06] VERSION_ID="7"
[2026-01-10 11:49:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 11:49:06] ANSI_COLOR="0;31"
[2026-01-10 11:49:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 11:49:06] HOME_URL="https://www.centos.org/"
[2026-01-10 11:49:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 11:49:06] 
[2026-01-10 11:49:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 11:49:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 11:49:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 11:49:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 11:49:06] 
[2026-01-10 11:49:06] 2026-01-10 16:48:04,652 | INFO     | ***************************************
[2026-01-10 11:49:06] 2026-01-10 16:48:05,155 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 11:49:06] 2026-01-10 16:48:05,173 | INFO     | sufficient remaining disk space (28516024320 B)
[2026-01-10 11:49:06] 2026-01-10 16:48:05,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 11:49:06] 2026-01-10 16:48:05,174 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 11:49:06] 2026-01-10 16:48:05,174 | INFO     | update_server=False
[2026-01-10 11:49:06] 2026-01-10 16:48:05,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 11:49:06] 2026-01-10 16:48:05,174 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 11:49:06] 2026-01-10 16:48:05,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:49:06] 2026-01-10 16:48:05,175 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 11:49:06] 2026-01-10 16:48:05,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 11:49:06] 2026-01-10 16:48:05,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 11:49:06] 2026-01-10 16:48:05,429 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 11:49:06] 2026-01-10 16:48:05,429 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 11:49:06] 2026-01-10 16:48:05,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 11:49:06] 2026-01-10 16:48:05,429 | INFO     | will abort loop
[2026-01-10 11:49:06] 2026-01-10 16:48:05,512 | INFO     | all data control threads have been joined
[2026-01-10 11:49:06] 2026-01-10 16:48:05,642 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 11:49:06] 2026-01-10 16:48:05,817 | INFO     | all job control threads have been joined
[2026-01-10 11:49:06] 2026-01-10 16:48:06,180 | INFO     | [job] retrieve thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:06,180 | INFO     | [job] queue monitor thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:06,258 | INFO     | all payload control threads have been joined
[2026-01-10 11:49:06] 2026-01-10 16:48:06,435 | INFO     | [job] job monitor thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:06,518 | INFO     | [data] control thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:06,820 | INFO     | [job] control thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,020 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,059 | INFO     | [payload] validate_post thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,078 | INFO     | [payload] failed_post thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,190 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,264 | INFO     | [payload] control thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,288 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,386 | INFO     | [job] validate thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,441 | INFO     | [data] copytool_in thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,473 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:07,648 | INFO     | [data] copytool_out thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:08,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 11:49:06] 2026-01-10 16:48:12,182 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 11:49:06] 2026-01-10 16:48:59,944 | INFO     | [monitor] cgroup control has ended
[2026-01-10 11:49:06] 2026-01-10 16:49:01,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241551005504)>', '<ExcThread(monitor, started 140240815650560)>']
[2026-01-10 11:49:06] 2026-01-10 16:49:02,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 11:49:06] 2026-01-10 16:49:02,434 | INFO     | [monitor] control thread has ended
[2026-01-10 11:49:06] 2026-01-10 16:49:06,501 | INFO     | all workflow threads have been joined
[2026-01-10 11:49:06] 2026-01-10 16:49:06,501 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 11:49:06] 2026-01-10 16:49:06,501 | INFO     | traces error code: 0
[2026-01-10 11:49:06] 2026-01-10 16:49:06,502 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 11:49:06] 2026-01-10 16:49:06,586 [wrapper] ==== pilot stdout END ====
[2026-01-10 11:49:06] 2026-01-10 16:49:06,589 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 11:49:06] 2026-01-10 16:49:06,593 [wrapper] pilotpid: 7747
[2026-01-10 11:49:06] 2026-01-10 16:49:06,597 [wrapper] Pilot exit status: 0
[2026-01-10 11:49:06] 2026-01-10 16:49:06,609 [wrapper] pandaids: 6965383391
[2026-01-10 11:49:06] 2026-01-10 16:49:06,652 [wrapper] cleanup supervisor_pilot  6097 7748
[2026-01-10 11:49:06] 2026-01-10 16:49:06,656 [wrapper] Test setup, not cleaning
[2026-01-10 11:49:06] 2026-01-10 16:49:06,660 [wrapper] apfmon messages muted
[2026-01-10 11:49:06] 2026-01-10 16:49:06,664 [wrapper] ==== wrapper stdout END ====
[2026-01-10 11:49:06] 2026-01-10 16:49:06,668 [wrapper] ==== wrapper stderr END ====
[2026-01-10 11:49:06]  *** Error codes and diagnostics ***
[2026-01-10 11:49:06]     "exeErrorCode": 0,
[2026-01-10 11:49:06]     "exeErrorDiag": "",
[2026-01-10 11:49:06]     "pilotErrorCode": 0,
[2026-01-10 11:49:06]     "pilotErrorDiag": "",
[2026-01-10 11:49:06]  *** Listing of results directory ***
[2026-01-10 11:49:06] total 444608
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 11:49:06] -rwx------ 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 11:49:06] -rwxr-xr-x 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas 224580788 Jan 10 08:13 EVNT.47898824._001409.pool.root.1
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:49:06] drwxrwx--x 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas    592404 Jan 10 08:13 input.tar.gz
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas      2519 Jan 10 08:13 pandaJob.out
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas        57 Jan 10 08:13 setup.sh.local
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas    989556 Jan 10 08:13 agis_schedconf.cvmfs.json
[2026-01-10 11:49:06] drwx------ 5 boincer umatlas      4096 Jan 10 08:13 pilot3
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas       530 Jan 10 11:47 boinc_task_state.xml
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas 222251340 Jan 10 11:47 HITS.47898826._040531.pool.root.1
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas      1052 Jan 10 11:47 memory_monitor_summary.json
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas        95 Jan 10 11:47 pilot_heartbeat.json
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas   1516240 Jan 10 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas    437459 Jan 10 11:47 log.47898826._040531.job.log.tgz.1
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas      7857 Jan 10 11:48 heartbeat.json
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas      5952 Jan 10 11:49 init_data.xml
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas      8192 Jan 10 11:49 boinc_mmap_file
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas        28 Jan 10 11:49 wrapper_checkpoint.txt
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas      4738 Jan 10 11:49 pilotlog.txt
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas   1825061 Jan 10 11:49 log.47898826._040531.job.log.1
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas       357 Jan 10 11:49 output.list
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas       620 Jan 10 11:49 runtime_log
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas   2283520 Jan 10 11:49 result.tar.gz
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas       662 Jan 10 11:49 XjjLDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLlmKDmUWeF0m.diag
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas      9343 Jan 10 11:49 runtime_log.err
[2026-01-10 11:49:06] -rw-r--r-- 1 boincer umatlas     21107 Jan 10 11:49 stderr.txt
[2026-01-10 11:49:06] HITS file was successfully produced:
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas 222251340 Jan 10 11:47 shared/HITS.pool.root.1
[2026-01-10 11:49:06]  *** Contents of shared directory: ***
[2026-01-10 11:49:06] total 439200
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas 224580788 Jan 10 08:13 ATLAS.root_0
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 11:49:06] -rw-r--r-- 2 boincer umatlas    592404 Jan 10 08:13 input.tar.gz
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas 222251340 Jan 10 11:47 HITS.pool.root.1
[2026-01-10 11:49:06] -rw------- 1 boincer umatlas   2283520 Jan 10 11:49 result.tar.gz
11:49:08 (2784): run_atlas exited; CPU time 97981.140482
11:49:08 (2784): called boinc_finish(0)

</stderr_txt>
]]>

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