Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:13:11 (191032): wrapper (7.7.26015): starting
08:13:11 (191032): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 08:13:11] Arguments: --nthreads 10
[2026-01-10 08:13:11] Threads: 10
[2026-01-10 08:13:11] Checking for CVMFS
[2026-01-10 08:13:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:13:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:13:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:13:13] 2.13.3.0 7345 24365 169184 154980 3 64 22629733 40960000 15687 16776704 0 42135012 99.784 22536674 43957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 08:13:13] CVMFS is ok
[2026-01-10 08:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 08:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 08:13:13] Further information can be found at the LHC@home message board.
[2026-01-10 08:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:13:13] Checking for apptainer binary...
[2026-01-10 08:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:13:13] Running /usr/bin/apptainer --version
[2026-01-10 08:13:13] apptainer version 1.4.5-2.el9
[2026-01-10 08:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:13:14] c-212-14.aglt2.org
[2026-01-10 08:13:14] apptainer works
[2026-01-10 08:13:14] Set ATHENA_PROC_NUMBER=10
[2026-01-10 08:13:14] Set ATHENA_CORE_NUMBER=10
[2026-01-10 08:13:14] Starting ATLAS job with PandaID=6965383448
[2026-01-10 08:13:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:34:48]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:34:48] 2026-01-10 19:33:54,993 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3193.3072604166664
[2026-01-10 14:34:48] 2026-01-10 19:33:55,023 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6965383448/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,024 | INFO     | extracted standard info from prmon json
[2026-01-10 14:34:48] 2026-01-10 19:33:55,024 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:34:48] 2026-01-10 19:33:55,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:34:48] 2026-01-10 19:33:55,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:34:48] 2026-01-10 19:33:55,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:34:48] 2026-01-10 19:33:55,074 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:34:48] 2026-01-10 19:33:55,075 | INFO     | sum of square deviations: 15962061524.258074
[2026-01-10 14:34:48] 2026-01-10 19:33:55,080 | INFO     | sum of deviations: 152634964701.3225
[2026-01-10 14:34:48] 2026-01-10 19:33:55,080 | INFO     | mean x: 1768062252.612903
[2026-01-10 14:34:48] 2026-01-10 19:33:55,081 | INFO     | mean y: 2597461.1827956988
[2026-01-10 14:34:48] 2026-01-10 19:33:55,081 | INFO     | intersect: -16904248757.09444
[2026-01-10 14:34:48] 2026-01-10 19:33:55,081 | INFO     | chi2: 3.695573756254723
[2026-01-10 14:34:48] 2026-01-10 19:33:55,082 | INFO     | sum of square deviations: 15327029869.193497
[2026-01-10 14:34:48] 2026-01-10 19:33:55,091 | INFO     | sum of deviations: 149319314109.00534
[2026-01-10 14:34:48] 2026-01-10 19:33:55,093 | INFO     | mean x: 1768062100.1144414
[2026-01-10 14:34:48] 2026-01-10 19:33:55,096 | INFO     | mean y: 2596664.9046321525
[2026-01-10 14:34:48] 2026-01-10 19:33:55,096 | INFO     | intersect: -17222255269.510487
[2026-01-10 14:34:48] 2026-01-10 19:33:55,096 | INFO     | chi2: 3.6972462816368465
[2026-01-10 14:34:48] 2026-01-10 19:33:55,106 | INFO     | current chi2=3.6972462816368465 (change=-0.045257529478148525 %)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,107 | INFO     | right removable region: 366
[2026-01-10 14:34:48] 2026-01-10 19:33:55,107 | INFO     | sum of square deviations: 15327004249.193497
[2026-01-10 14:34:48] 2026-01-10 19:33:55,110 | INFO     | sum of deviations: 39932984648.80379
[2026-01-10 14:34:48] 2026-01-10 19:33:55,110 | INFO     | mean x: 1768062405.1144414
[2026-01-10 14:34:48] 2026-01-10 19:33:55,111 | INFO     | mean y: 2624483.433242507
[2026-01-10 14:34:48] 2026-01-10 19:33:55,111 | INFO     | intersect: -4603886204.085961
[2026-01-10 14:34:48] 2026-01-10 19:33:55,111 | INFO     | chi2: 0.5218693344428482
[2026-01-10 14:34:48] 2026-01-10 19:33:55,111 | INFO     | current chi2=0.5218693344428482 (change=85.878530131902 %)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,112 | INFO     | sum of square deviations: 14709017061.627144
[2026-01-10 14:34:48] 2026-01-10 19:33:55,114 | INFO     | sum of deviations: 6524957940.842531
[2026-01-10 14:34:48] 2026-01-10 19:33:55,114 | INFO     | mean x: 1768062557.616022
[2026-01-10 14:34:48] 2026-01-10 19:33:55,115 | INFO     | mean y: 2632717.682320442
[2026-01-10 14:34:48] 2026-01-10 19:33:55,115 | INFO     | intersect: -781684397.2470996
[2026-01-10 14:34:48] 2026-01-10 19:33:55,115 | INFO     | chi2: 0.25632114354614016
[2026-01-10 14:34:48] 2026-01-10 19:33:55,115 | INFO     | current chi2=0.25632114354614016 (change=50.88403808593379 %)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,115 | INFO     | sum of square deviations: 14107867399.058832
[2026-01-10 14:34:48] 2026-01-10 19:33:55,118 | INFO     | sum of deviations: -8544148728.117675
[2026-01-10 14:34:48] 2026-01-10 19:33:55,118 | INFO     | mean x: 1768062710.1176472
[2026-01-10 14:34:48] 2026-01-10 19:33:55,118 | INFO     | mean y: 2636540.431372549
[2026-01-10 14:34:48] 2026-01-10 19:33:55,118 | INFO     | intersect: 1073428484.2861737
[2026-01-10 14:34:48] 2026-01-10 19:33:55,119 | INFO     | chi2: 0.19939446703188476
[2026-01-10 14:34:48] 2026-01-10 19:33:55,119 | INFO     | current chi2=0.19939446703188476 (change=22.209122402736188 %)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,119 | INFO     | left removable region: 30
[2026-01-10 14:34:48] 2026-01-10 19:33:55,119 | INFO     | sum of square deviations: 11761772137.702385
[2026-01-10 14:34:48] 2026-01-10 19:33:55,122 | INFO     | sum of deviations: -10821415167.648813
[2026-01-10 14:34:48] 2026-01-10 19:33:55,122 | INFO     | mean x: 1768062984.6130953
[2026-01-10 14:34:48] 2026-01-10 19:33:55,122 | INFO     | mean y: 2636338.056547619
[2026-01-10 14:34:48] 2026-01-10 19:33:55,122 | INFO     | intersect: 1629342192.841805
[2026-01-10 14:34:48] 2026-01-10 19:33:55,122 | INFO     | chi2: 0.1405947070402511
[2026-01-10 14:34:48] 2026-01-10 19:33:55,123 | INFO     | current memory leak: -0.92 B/s (using 336 data points, chi2=0.14)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,123 | INFO     | could have reported an average CPU frequency of 3196 MHz (16 samples)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | ..............................
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . Timing measurements:
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . get job = 0 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . initial setup = 6 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . payload setup = 29 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . stage-in = 0 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . payload execution = 22702 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . stage-out = 2 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | . log creation = 0 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,124 | INFO     | ..............................
[2026-01-10 14:34:48] 2026-01-10 19:33:55,244 | INFO     | 
[2026-01-10 14:34:48] 2026-01-10 19:33:55,249 | INFO     | job summary report
[2026-01-10 14:34:48] 2026-01-10 19:33:55,249 | INFO     | --------------------------------------------------
[2026-01-10 14:34:48] 2026-01-10 19:33:55,249 | INFO     | PanDA job id: 6965383448
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | task id: 47898826
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | errors: (none)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | pilot state: finished 
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | transexitcode: 0
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | exeerrorcode: 0
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | exeerrordiag: 
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | exitcode: 0
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | exitmsg: OK
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | cpuconsumptiontime: 45619 s
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | nevents: 400
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | neventsw: 0
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | pid: 212060
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | pgrp: 212060
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | corecount: 10
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | event service: False
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | sizes: {0: 2283086, 1: 2283771, 2: 2283970, 13: 2283970, 21: 2284288, 23: 2284316, 22736: 2319291, 22739: 2328289, 22742: 2328345, 22749: 2328539}
[2026-01-10 14:34:48] 2026-01-10 19:33:55,250 | INFO     | --------------------------------------------------
[2026-01-10 14:34:48] 2026-01-10 19:33:55,251 | INFO     | 
[2026-01-10 14:34:48] 2026-01-10 19:33:55,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 14:34:48] 2026-01-10 19:33:55,291 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,294 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:34:48] 2026-01-10 19:33:55,294 | INFO     | job 6965383448 has completed (purged errors)
[2026-01-10 14:34:48] 2026-01-10 19:33:55,294 | INFO     | overall cleanup function is called
[2026-01-10 14:34:48] 2026-01-10 19:33:55,814 | INFO     | PID=197924 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 14:34:48] 2026-01-10 19:33:55,815 | INFO     | .. there are 14 such processes running
[2026-01-10 14:34:48] 2026-01-10 19:33:56,303 | INFO     | --- collectZombieJob: --- 10, [212060]
[2026-01-10 14:34:48] 2026-01-10 19:33:56,304 | INFO     | zombie collector waiting for pid 212060
[2026-01-10 14:34:48] 2026-01-10 19:33:56,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:34:48] 2026-01-10 19:33:56,304 | INFO     | collected zombie processes
[2026-01-10 14:34:48] 2026-01-10 19:33:56,304 | INFO     | will attempt to kill all subprocesses of pid=212060
[2026-01-10 14:34:48] 2026-01-10 19:33:56,861 | INFO     | process IDs to be killed: [212060] (in reverse order)
[2026-01-10 14:34:48] 2026-01-10 19:33:56,995 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:34:48] 2026-01-10 19:33:56,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:34:48] 2026-01-10 19:33:57,012 | INFO     | did not find any defunct processes belonging to 212060
[2026-01-10 14:34:48] 2026-01-10 19:33:57,027 | INFO     | did not find any defunct processes belonging to 212060
[2026-01-10 14:34:48] 2026-01-10 19:33:57,028 | INFO     | ready for new job
[2026-01-10 14:34:48] 2026-01-10 19:33:57,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:34:48] 2026-01-10 19:33:57,031 | INFO     | ***************************************
[2026-01-10 14:34:48] 2026-01-10 19:33:57,031 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:34:48] 2026-01-10 19:33:57,031 | INFO     | ***************************************
[2026-01-10 14:34:48] 2026-01-10 19:33:57,031 | INFO     | 
[2026-01-10 14:34:48] 2026-01-10 19:33:57,036 | INFO     | architecture information:
[2026-01-10 14:34:48] 2026-01-10 19:33:57,037 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:34:48] 2026-01-10 19:33:57,059 | INFO     | cat /etc/os-release:
[2026-01-10 14:34:48] NAME="CentOS Linux"
[2026-01-10 14:34:48] VERSION="7 (Core)"
[2026-01-10 14:34:48] ID="centos"
[2026-01-10 14:34:48] ID_LIKE="rhel fedora"
[2026-01-10 14:34:48] VERSION_ID="7"
[2026-01-10 14:34:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:34:48] ANSI_COLOR="0;31"
[2026-01-10 14:34:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:34:48] HOME_URL="https://www.centos.org/"
[2026-01-10 14:34:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:34:48] 
[2026-01-10 14:34:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:34:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:34:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:34:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:34:48] 
[2026-01-10 14:34:48] 2026-01-10 19:33:57,059 | INFO     | ***************************************
[2026-01-10 14:34:48] 2026-01-10 19:33:57,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 14:34:48] 2026-01-10 19:33:57,583 | INFO     | sufficient remaining disk space (128195756032 B)
[2026-01-10 14:34:48] 2026-01-10 19:33:57,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:34:48] 2026-01-10 19:33:57,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:34:48] 2026-01-10 19:33:57,584 | INFO     | update_server=False
[2026-01-10 14:34:48] 2026-01-10 19:33:57,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:34:48] 2026-01-10 19:33:57,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:34:48] 2026-01-10 19:33:58,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:34:48] 2026-01-10 19:33:58,117 | INFO     | aborting loop
[2026-01-10 14:34:48] 2026-01-10 19:33:58,248 | INFO     | all job control threads have been joined
[2026-01-10 14:34:48] 2026-01-10 19:33:58,541 | INFO     | all data control threads have been joined
[2026-01-10 14:34:48] 2026-01-10 19:33:58,587 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:58,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:34:48] 2026-01-10 19:33:58,733 | INFO     | all payload control threads have been joined
[2026-01-10 14:34:48] 2026-01-10 19:33:58,778 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:58,786 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:58,819 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,114 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,139 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,254 | INFO     | [job] control thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,529 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,546 | INFO     | [data] control thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,738 | INFO     | [payload] control thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,764 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,778 | INFO     | [job] validate thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:33:59,781 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:34:00,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:34:48] 2026-01-10 19:34:01,274 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:34:02,718 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:34:07,690 | INFO     | job.realtimelogging is not enabled
[2026-01-10 14:34:48] 2026-01-10 19:34:08,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:34:48] 2026-01-10 19:34:30,003 | INFO     | PID=197924 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 14:34:48] 2026-01-10 19:34:30,003 | INFO     | .. there are 14 such processes running
[2026-01-10 14:34:48] 2026-01-10 19:34:30,008 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:34:48] 2026-01-10 19:34:30,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:34:48] 2026-01-10 19:34:30,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:34:48] 2026-01-10 19:34:41,061 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:34:48] 2026-01-10 19:34:42,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165165721408)>', '<ExcThread(monitor, started 140164798060288)>']
[2026-01-10 14:34:48] 2026-01-10 19:34:43,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:34:48] 2026-01-10 19:34:43,110 | INFO     | [monitor] control thread has ended
[2026-01-10 14:34:48] 2026-01-10 19:34:47,367 | INFO     | all workflow threads have been joined
[2026-01-10 14:34:48] 2026-01-10 19:34:47,371 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:34:48] 2026-01-10 19:34:47,372 | INFO     | traces error code: 0
[2026-01-10 14:34:48] 2026-01-10 19:34:47,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:34:48] 2026-01-10 19:34:47,868 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:34:48] 2026-01-10 19:34:47,874 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:34:48] 2026-01-10 19:34:47,891 [wrapper] pilotpid: 197924
[2026-01-10 14:34:48] 2026-01-10 19:34:47,914 [wrapper] Pilot exit status: 0
[2026-01-10 14:34:48] 2026-01-10 19:34:47,960 [wrapper] pandaids: 6965383448
[2026-01-10 14:34:48] 2026-01-10 19:34:48,084 [wrapper] cleanup supervisor_pilot  878992 197925
[2026-01-10 14:34:48] 2026-01-10 19:34:48,108 [wrapper] Test setup, not cleaning
[2026-01-10 14:34:48] 2026-01-10 19:34:48,126 [wrapper] apfmon messages muted
[2026-01-10 14:34:48] 2026-01-10 19:34:48,133 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:34:48] 2026-01-10 19:34:48,136 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:34:48]  *** Error codes and diagnostics ***
[2026-01-10 14:34:48]     "exeErrorCode": 0,
[2026-01-10 14:34:48]     "exeErrorDiag": "",
[2026-01-10 14:34:48]     "pilotErrorCode": 0,
[2026-01-10 14:34:48]     "pilotErrorDiag": "",
[2026-01-10 14:34:48]  *** Listing of results directory ***
[2026-01-10 14:34:48] total 447272
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 08:09 pilot3.tar.gz
[2026-01-10 14:34:48] -rwx------. 1 boincer umatlas     36322 Jan 10 08:10 runpilot2-wrapper.sh
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 08:11 queuedata.json
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas       100 Jan 10 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:34:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 08:13 run_atlas
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas       105 Jan 10 08:13 job.xml
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas 222526274 Jan 10 08:13 EVNT.47898824._001494.pool.root.1
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 14:34:48] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 08:13 shared
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 08:13 input.tar.gz
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas         0 Jan 10 08:13 boinc_lockfile
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas      2516 Jan 10 08:13 pandaJob.out
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas        57 Jan 10 08:13 setup.sh.local
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas    989556 Jan 10 08:13 agis_schedconf.cvmfs.json
[2026-01-10 14:34:48] drwx------. 5 boincer umatlas      4096 Jan 10 08:14 pilot3
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas      6957 Jan 10 14:29 init_data.xml
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas 224353759 Jan 10 14:33 HITS.47898826._040588.pool.root.1
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas       531 Jan 10 14:33 boinc_task_state.xml
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas      1032 Jan 10 14:33 memory_monitor_summary.json
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas   1516240 Jan 10 14:33 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas    591128 Jan 10 14:33 log.47898826._040588.job.log.tgz.1
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas      7768 Jan 10 14:33 heartbeat.json
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas        95 Jan 10 14:34 pilot_heartbeat.json
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas      4896 Jan 10 14:34 pilotlog.txt
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 14:34 boinc_mmap_file
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas   3012000 Jan 10 14:34 log.47898826._040588.job.log.1
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas       357 Jan 10 14:34 output.list
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas       620 Jan 10 14:34 runtime_log
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas   3624960 Jan 10 14:34 result.tar.gz
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas       657 Jan 10 14:34 Xc2MDmguny8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmplmKDm8ebmGm.diag
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas      9345 Jan 10 14:34 runtime_log.err
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas        28 Jan 10 14:34 wrapper_checkpoint.txt
[2026-01-10 14:34:48] -rw-r--r--. 1 boincer umatlas     21290 Jan 10 14:34 stderr.txt
[2026-01-10 14:34:48] HITS file was successfully produced:
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas 224353759 Jan 10 14:33 shared/HITS.pool.root.1
[2026-01-10 14:34:48]  *** Contents of shared directory: ***
[2026-01-10 14:34:48] total 440552
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas 222526274 Jan 10 08:13 ATLAS.root_0
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 08:13 start_atlas.sh
[2026-01-10 14:34:48] -rw-r--r--. 2 boincer umatlas    592402 Jan 10 08:13 input.tar.gz
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas 224353759 Jan 10 14:33 HITS.pool.root.1
[2026-01-10 14:34:48] -rw-------. 1 boincer umatlas   3624960 Jan 10 14:34 result.tar.gz
14:34:50 (191032): run_atlas exited; CPU time 46304.849581
14:34:50 (191032): called boinc_finish(0)

</stderr_txt>
]]>

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